RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
CTDSPL-206ENST00000443503 DNAH10Q8IVF4 4471 aa10.17□□□□□ -0.78
CTDSPL-206ENST00000443503 ALMS1Q8TCU4 4167 aa10.1□□□□□ -0.79
CTDSPL-206ENST00000443503 VPS13DQ5THJ4 4388 aa10.07□□□□□ -0.8
CTDSPL-206ENST00000443503 FAT1Q14517 4588 aa10.06□□□□□ -0.8
CTDSPL-206ENST00000443503 STARD9Q9P2P6 4700 aa10.03□□□□□ -0.8
CTDSPL-206ENST00000443503 DNAH17Q9UFH2 4485 aa9.99□□□□□ -0.81
CTDSPL-206ENST00000443503 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
CTDSPL-206ENST00000443503 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.82
CTDSPL-206ENST00000443503 LRP1BQ9NZR2 4599 aa9.9□□□□□ -0.82
CTDSPL-206ENST00000443503 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-206ENST00000443503 KRTAP15-1Q3LI76 137 aa9.87□□□□□ -0.83
CTDSPL-206ENST00000443503 RYR1P21817 5038 aa9.84□□□□□ -0.83
CTDSPL-206ENST00000443503 DNAH8Q96JB1 4490 aa9.81□□□□□ -0.84
CTDSPL-206ENST00000443503 DNAH2Q9P225 4427 aa9.81□□□□□ -0.84
CTDSPL-206ENST00000443503 KRTAP4-1Q9BYQ7 146 aa9.68□□□□□ -0.86
CTDSPL-206ENST00000443503 KRTAP10-12P60413 245 aa9.67□□□□□ -0.86
CTDSPL-206ENST00000443503 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
CTDSPL-206ENST00000443503 SACSQ9NZJ4 4579 aa9.64□□□□□ -0.87
CTDSPL-206ENST00000443503 KIAA1109Q2LD37 5005 aa9.63□□□□□ -0.87
CTDSPL-206ENST00000443503 LYSTQ99698 3801 aa9.6□□□□□ -0.87
CTDSPL-206ENST00000443503 MYCBP2O75592 4640 aa9.59□□□□□ -0.87
CTDSPL-206ENST00000443503 DYNC2H1Q8NCM8 4307 aaKnown RBP9.56□□□□□ -0.88
CTDSPL-206ENST00000443503 ANK2Q01484 3957 aa9.54□□□□□ -0.88
CTDSPL-206ENST00000443503 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.89
CTDSPL-206ENST00000443503 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
CTDSPL-206ENST00000443503 KRTAP12-3P60328 96 aa9.46□□□□□ -0.89
CTDSPL-206ENST00000443503 LCE3AQ5TA76 89 aa9.46□□□□□ -0.9
CTDSPL-206ENST00000443503 APOBP04114 4563 aaKnown RBP9.45□□□□□ -0.9
CTDSPL-206ENST00000443503 VPS13BQ7Z7G8 4022 aa9.44□□□□□ -0.9
CTDSPL-206ENST00000443503 RYR3Q15413 4870 aa9.39□□□□□ -0.91
CTDSPL-206ENST00000443503 KRTAP23-1A1A580 65 aa9.38□□□□□ -0.91
CTDSPL-206ENST00000443503 LRP1Q07954 4544 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-206ENST00000443503 KRTAP17-1Q9BYP8 105 aa9.26□□□□□ -0.93
CTDSPL-206ENST00000443503 MT1HP80294 61 aa9.24□□□□□ -0.93
CTDSPL-206ENST00000443503 FAT3Q8TDW7 4589 aa9.24□□□□□ -0.93
CTDSPL-206ENST00000443503 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
CTDSPL-206ENST00000443503 DNAH6Q9C0G6 4158 aa9.17□□□□□ -0.94
CTDSPL-206ENST00000443503 MT2AP02795 61 aa9.17□□□□□ -0.94
CTDSPL-206ENST00000443503 CMYA5Q8N3K9 4069 aa9.13□□□□□ -0.95
CTDSPL-206ENST00000443503 FRAS1Q86XX4 4008 aa9.13□□□□□ -0.95
CTDSPL-206ENST00000443503 SPRR2GQ9BYE4 73 aa9.09□□□□□ -0.95
CTDSPL-206ENST00000443503 HECTD4Q9Y4D8 3996 aa9.05□□□□□ -0.96
CTDSPL-206ENST00000443503 MT1FP04733 61 aa9.03□□□□□ -0.96
CTDSPL-206ENST00000443503 RYR2Q92736 4967 aa9.02□□□□□ -0.97
CTDSPL-206ENST00000443503 INE1O15225 51 aa9.01□□□□□ -0.97
CTDSPL-206ENST00000443503 DNAH7Q8WXX0 4024 aa9.01□□□□□ -0.97
CTDSPL-206ENST00000443503 HYDINQ4G0P3 5121 aa8.95□□□□□ -0.98
CTDSPL-206ENST00000443503 HERC2O95714 4834 aa8.93□□□□□ -0.98
CTDSPL-206ENST00000443503 LRP2P98164 4655 aa8.93□□□□□ -0.98
CTDSPL-206ENST00000443503 KRTAP8-1Q8IUC2 63 aa8.84□□□□□ -0.99
CTDSPL-206ENST00000443503 PKHD1P08F94 4074 aa8.84□□□□□ -0.99
CTDSPL-206ENST00000443503 KRTAP19-1Q8IUB9 90 aa8.71□□□□□ -1.02
CTDSPL-206ENST00000443503 HSPG2P98160 4391 aa8.63□□□□□ -1.03
CTDSPL-206ENST00000443503 KMT2CQ8NEZ4 4911 aaKnown RBP8.57□□□□□ -1.04
CTDSPL-206ENST00000443503 KRTAP19-5Q3LI72 72 aa8.55□□□□□ -1.04
CTDSPL-206ENST00000443503 PCLOQ9Y6V0 5065 aa8.53□□□□□ -1.04
CTDSPL-206ENST00000443503 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
CTDSPL-206ENST00000443503 KRTAP19-8Q3LI54 63 aa8.52□□□□□ -1.05
CTDSPL-206ENST00000443503 KRTAP10-5P60370 271 aa8.5□□□□□ -1.05
CTDSPL-206ENST00000443503 PKD1P98161 4303 aa8.44□□□□□ -1.06
CTDSPL-206ENST00000443503 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL-206ENST00000443503 LCE2CQ5TA81 110 aa8.4□□□□□ -1.06
CTDSPL-206ENST00000443503 HERC1Q15751 4861 aa8.4□□□□□ -1.06
CTDSPL-206ENST00000443503 LPAP08519 4548 aa8.38□□□□□ -1.07
CTDSPL-206ENST00000443503 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
CTDSPL-206ENST00000443503 MT1BP07438 61 aa8.34□□□□□ -1.07
CTDSPL-206ENST00000443503 MT1XP80297 61 aa8.34□□□□□ -1.07
CTDSPL-206ENST00000443503 LCE3CQ5T5A8 94 aa8.34□□□□□ -1.07
CTDSPL-206ENST00000443503 SPRR2FQ96RM1 72 aa8.29□□□□□ -1.08
CTDSPL-206ENST00000443503 ABCA13Q86UQ4 5058 aa8.16□□□□□ -1.1
CTDSPL-206ENST00000443503 EPPK1P58107 5090 aaKnown RBP8.16□□□□□ -1.1
CTDSPL-206ENST00000443503 KRTAP19-2Q3LHN2 52 aa8.16□□□□□ -1.1
CTDSPL-206ENST00000443503 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
CTDSPL-206ENST00000443503 MUC17Q685J3 4493 aa8.09□□□□□ -1.11
CTDSPL-206ENST00000443503 TNXBP22105 4242 aa8.07□□□□□ -1.12
CTDSPL-206ENST00000443503 KRTAP4-8A0A0G2JLE6 195 aa8.04□□□□□ -1.12
CTDSPL-206ENST00000443503 KRTAP4-8Q9BYQ9 185 aa8.04□□□□□ -1.12
CTDSPL-206ENST00000443503 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
CTDSPL-206ENST00000443503 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
CTDSPL-206ENST00000443503 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
CTDSPL-206ENST00000443503 SPRR5A0A1B0GTR4 108 aa7.89□□□□□ -1.15
CTDSPL-206ENST00000443503 UBR4Q5T4S7 5183 aa7.83□□□□□ -1.16
CTDSPL-206ENST00000443503 LCE2BO14633 110 aa7.83□□□□□ -1.16
CTDSPL-206ENST00000443503 FAT4Q6V0I7 4981 aa7.73□□□□□ -1.17
CTDSPL-206ENST00000443503 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
CTDSPL-206ENST00000443503 MT1GP13640 62 aa7.73□□□□□ -1.17
CTDSPL-206ENST00000443503 RNF213Q63HN8 5207 aa7.72□□□□□ -1.17
CTDSPL-206ENST00000443503 SYNE1Q8NF91 8797 aaKnown RBP7.71□□□□□ -1.17
CTDSPL-206ENST00000443503 SPRR2EP22531 72 aa7.63□□□□□ -1.19
CTDSPL-206ENST00000443503 SPRR2BP35325 72 aa7.63□□□□□ -1.19
CTDSPL-206ENST00000443503 SPRR2AP35326 72 aa7.63□□□□□ -1.19
CTDSPL-206ENST00000443503 LCE3BQ5TA77 95 aa7.6□□□□□ -1.19
CTDSPL-206ENST00000443503 KRTAP4-7Q9BYR0 210 aa7.57□□□□□ -1.2
CTDSPL-206ENST00000443503 HMCN2Q8NDA2 5059 aa7.55□□□□□ -1.2
CTDSPL-206ENST00000443503 MUC2Q02817 5179 aa7.51□□□□□ -1.21
CTDSPL-206ENST00000443503 MT1LQ93083 61 aa7.48□□□□□ -1.21
CTDSPL-206ENST00000443503 MT1EP04732 61 aa7.44□□□□□ -1.22
CTDSPL-206ENST00000443503 KRTAP12-4P60329 112 aa7.43□□□□□ -1.22
CTDSPL-206ENST00000443503 KRTAP19-3Q7Z4W3 81 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms