RNA–Protein interactions for RNA: ENST00000439704.1

NMD3P1-201, Transcript of NMD3 ribosome export adaptor pseudogene 1, humanhuman

BASIC

Gene NMD3P1, Length 1,488 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3P1-201ENST00000439704 SPINK6Q6UWN8 80 aa2.17□□□□□ -2.06
NMD3P1-201ENST00000439704 DNAH8Q96JB1 4490 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 LOC110117498A0A087WWA1 95 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 IGFL1Q6UW32 110 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 KRTAP13-1Q8IUC0 172 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 DEFB105AQ8NG35 78 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 DNAH11Q96DT5 4516 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 FAT2Q9NYQ8 4349 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 RYR3Q15413 4870 aa2.16□□□□□ -2.06
NMD3P1-201ENST00000439704 OBSCN-AS1Q96MR7 158 aa2.15□□□□□ -2.06
NMD3P1-201ENST00000439704 SPRR4Q96PI1 79 aa2.15□□□□□ -2.06
NMD3P1-201ENST00000439704 KLKP1Q107X0 134 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 SSBP3-AS1Q7Z2R9 100 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 LINC00643Q86TS7 51 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 UBL5Q9BZL1 73 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 CYSTM1Q9H1C7 97 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 TRBV7-4A0A0J9YYF1 115 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 CHKB-CPT1BH3BT56 60 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 H7BZZ5 65 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 ATP5EP2Q5VTU8 51 aa2.14□□□□□ -2.07
NMD3P1-201ENST00000439704 PKD1P98161 4303 aa2.13□□□□□ -2.07
NMD3P1-201ENST00000439704 RYR1P21817 5038 aa2.13□□□□□ -2.07
NMD3P1-201ENST00000439704 TRAV22A0A0B4J277 110 aa2.13□□□□□ -2.07
NMD3P1-201ENST00000439704 SPAG11AQ6PDA7 123 aa2.13□□□□□ -2.07
NMD3P1-201ENST00000439704 C20orf197Q8N268 126 aa2.13□□□□□ -2.07
NMD3P1-201ENST00000439704 LRP1BQ9NZR2 4599 aa2.12□□□□□ -2.07
NMD3P1-201ENST00000439704 NREPQ16612 68 aa2.12□□□□□ -2.07
NMD3P1-201ENST00000439704 Q5VV11 94 aa2.12□□□□□ -2.07
NMD3P1-201ENST00000439704 COA5Q86WW8 74 aa2.12□□□□□ -2.07
NMD3P1-201ENST00000439704 LINC00304Q8N9R0 145 aa2.12□□□□□ -2.07
NMD3P1-201ENST00000439704 RPS29P62273 56 aaKnown RBP2.11□□□□□ -2.07
NMD3P1-201ENST00000439704 SPINK1P00995 79 aa2.1□□□□□ -2.07
NMD3P1-201ENST00000439704 SMR3BP02814 79 aaPredicted RBP2.1□□□□□ -2.07
NMD3P1-201ENST00000439704 HAMPP81172 84 aa2.1□□□□□ -2.07
NMD3P1-201ENST00000439704 Q5VSD8 79 aa2.1□□□□□ -2.07
NMD3P1-201ENST00000439704 APOBP04114 4563 aaKnown RBP2.1□□□□□ -2.07
NMD3P1-201ENST00000439704 BIRC6Q9NR09 4857 aa2.1□□□□□ -2.07
NMD3P1-201ENST00000439704 PKHD1P08F94 4074 aa2.09□□□□□ -2.07
NMD3P1-201ENST00000439704 LOC101927531A0A1B0GV80 90 aa2.09□□□□□ -2.07
NMD3P1-201ENST00000439704 NDUFB1O75438 58 aa2.09□□□□□ -2.07
NMD3P1-201ENST00000439704 LINC00846Q9NV44 126 aa2.08□□□□□ -2.08
NMD3P1-201ENST00000439704 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
NMD3P1-201ENST00000439704 EPPK1P58107 5090 aaKnown RBP2.07□□□□□ -2.08
NMD3P1-201ENST00000439704 INE1O15225 51 aa2.07□□□□□ -2.08
NMD3P1-201ENST00000439704 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
NMD3P1-201ENST00000439704 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
NMD3P1-201ENST00000439704 IGKV3D-7A0A0C4DH55 119 aa2.06□□□□□ -2.08
NMD3P1-201ENST00000439704 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
NMD3P1-201ENST00000439704 KIAA1109Q2LD37 5005 aa2.05□□□□□ -2.08
NMD3P1-201ENST00000439704 IGKV4-1P06312 121 aa2.05□□□□□ -2.08
NMD3P1-201ENST00000439704 SNURFQ9Y675 71 aa2.05□□□□□ -2.08
NMD3P1-201ENST00000439704 LINC00472Q9H8W2 130 aa2.04□□□□□ -2.08
NMD3P1-201ENST00000439704 FAT1Q14517 4588 aa2.03□□□□□ -2.08
NMD3P1-201ENST00000439704 HERC2O95714 4834 aa2.03□□□□□ -2.08
NMD3P1-201ENST00000439704 HSPG2P98160 4391 aa2.03□□□□□ -2.08
NMD3P1-201ENST00000439704 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
NMD3P1-201ENST00000439704 TP53AIP1Q9HCN2 124 aa2.02□□□□□ -2.09
NMD3P1-201ENST00000439704 K7EQZ3 153 aa2.01□□□□□ -2.09
NMD3P1-201ENST00000439704 Q96NJ1 140 aa2.01□□□□□ -2.09
NMD3P1-201ENST00000439704 LINC00208Q96KT6 92 aa2□□□□□ -2.09
NMD3P1-201ENST00000439704 SRRM2Q9UQ35 2752 aaKnown RBP1.99□□□□□ -2.09
NMD3P1-201ENST00000439704 ABCA13Q86UQ4 5058 aa1.99□□□□□ -2.09
NMD3P1-201ENST00000439704 A0A087WVE0 104 aa1.99□□□□□ -2.09
NMD3P1-201ENST00000439704 MRPL34Q9BQ48 92 aaKnown RBP1.99□□□□□ -2.09
NMD3P1-201ENST00000439704 FAT3Q8TDW7 4589 aa1.98□□□□□ -2.09
NMD3P1-201ENST00000439704 MMP24-AS1A0A0U1RRL7 71 aa1.98□□□□□ -2.09
NMD3P1-201ENST00000439704 WFDC13Q8IUB5 93 aa1.98□□□□□ -2.09
NMD3P1-201ENST00000439704 PRR15LQ9BU68 103 aa1.98□□□□□ -2.09
NMD3P1-201ENST00000439704 LINC01558Q9Y6Z2 57 aa1.98□□□□□ -2.09
NMD3P1-201ENST00000439704 UQCR11O14957 56 aa1.97□□□□□ -2.09
NMD3P1-201ENST00000439704 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
NMD3P1-201ENST00000439704 MT1HL1P0DM35 61 aa1.97□□□□□ -2.09
NMD3P1-201ENST00000439704 TNXBP22105 4242 aa1.95□□□□□ -2.1
NMD3P1-201ENST00000439704 PCLOQ9Y6V0 5065 aa1.95□□□□□ -2.1
NMD3P1-201ENST00000439704 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
NMD3P1-201ENST00000439704 H0Y9P7 68 aa1.94□□□□□ -2.1
NMD3P1-201ENST00000439704 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
NMD3P1-201ENST00000439704 ZCCHC13Q8WW36 166 aaKnown RBP1.94□□□□□ -2.1
NMD3P1-201ENST00000439704 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
NMD3P1-201ENST00000439704 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
NMD3P1-201ENST00000439704 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
NMD3P1-201ENST00000439704 C9orf92A6NGG3 77 aa1.93□□□□□ -2.1
NMD3P1-201ENST00000439704 DMBT1Q9UGM3 2413 aaPredicted RBP1.92□□□□□ -2.1
NMD3P1-201ENST00000439704 ACYP2P14621 99 aa1.92□□□□□ -2.1
NMD3P1-201ENST00000439704 RPL37P61927 97 aaKnown RBP1.92□□□□□ -2.1
NMD3P1-201ENST00000439704 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
NMD3P1-201ENST00000439704 HERC1Q15751 4861 aa1.88□□□□□ -2.11
NMD3P1-201ENST00000439704 HMCN2Q8NDA2 5059 aa1.88□□□□□ -2.11
NMD3P1-201ENST00000439704 SPINK7P58062 85 aa1.88□□□□□ -2.11
NMD3P1-201ENST00000439704 PCOTHQ58A44 107 aa1.86□□□□□ -2.11
NMD3P1-201ENST00000439704 SPATA8Q6RVD6 105 aa1.85□□□□□ -2.11
NMD3P1-201ENST00000439704 COX6B2Q6YFQ2 88 aa1.83□□□□□ -2.12
NMD3P1-201ENST00000439704 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
NMD3P1-201ENST00000439704 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
NMD3P1-201ENST00000439704 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
NMD3P1-201ENST00000439704 LRP2P98164 4655 aa1.8□□□□□ -2.12
NMD3P1-201ENST00000439704 S4R3F8 94 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms