RNA–Protein interactions for RNA: ENST00000439526.6

FMR1-207, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 3,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-207ENST00000439526 S4R3F8 94 aa9.75□□□□□ -0.85
FMR1-207ENST00000439526 TPRXLQ17RH7 258 aa9.71□□□□□ -0.85
FMR1-207ENST00000439526 TNXBP22105 4242 aa9.69□□□□□ -0.86
FMR1-207ENST00000439526 SVIPQ8NHG7 77 aa9.69□□□□□ -0.86
FMR1-207ENST00000439526 A0A0D9SG42 100 aa9.68□□□□□ -0.86
FMR1-207ENST00000439526 LRP2P98164 4655 aa9.68□□□□□ -0.86
FMR1-207ENST00000439526 HERC2O95714 4834 aa9.68□□□□□ -0.86
FMR1-207ENST00000439526 SEC61BP60468 96 aaKnown RBP9.67□□□□□ -0.86
FMR1-207ENST00000439526 A0A1B0GU33 70 aa9.67□□□□□ -0.86
FMR1-207ENST00000439526 SPATA8Q6RVD6 105 aa9.67□□□□□ -0.86
FMR1-207ENST00000439526 LPAP08519 4548 aa9.62□□□□□ -0.87
FMR1-207ENST00000439526 ABCA13Q86UQ4 5058 aa9.61□□□□□ -0.87
FMR1-207ENST00000439526 H1FX-AS1Q4G0G2 97 aa9.58□□□□□ -0.88
FMR1-207ENST00000439526 CSAG1Q6PB30 78 aa9.54□□□□□ -0.88
FMR1-207ENST00000439526 LINC01554Q52M75 96 aa9.52□□□□□ -0.88
FMR1-207ENST00000439526 K7ERS5 55 aa9.49□□□□□ -0.89
FMR1-207ENST00000439526 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
FMR1-207ENST00000439526 P0C880 135 aa9.39□□□□□ -0.91
FMR1-207ENST00000439526 H0YAA0 97 aa9.38□□□□□ -0.91
FMR1-207ENST00000439526 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
FMR1-207ENST00000439526 BIRC6Q9NR09 4857 aa9.38□□□□□ -0.91
FMR1-207ENST00000439526 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
FMR1-207ENST00000439526 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
FMR1-207ENST00000439526 KTN1-AS1Q86SY8 53 aa9.3□□□□□ -0.92
FMR1-207ENST00000439526 A6NN06 94 aa9.3□□□□□ -0.92
FMR1-207ENST00000439526 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
FMR1-207ENST00000439526 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
FMR1-207ENST00000439526 HERC1Q15751 4861 aa9.27□□□□□ -0.93
FMR1-207ENST00000439526 M0R2T5 61 aa9.26□□□□□ -0.93
FMR1-207ENST00000439526 MUC2Q02817 5179 aa9.24□□□□□ -0.93
FMR1-207ENST00000439526 R4GN34 69 aa9.24□□□□□ -0.93
FMR1-207ENST00000439526 M0QZ58 72 aa9.23□□□□□ -0.93
FMR1-207ENST00000439526 KRTAP10-6P60371 365 aaPredicted RBP9.19□□□□□ -0.94
FMR1-207ENST00000439526 KRTAP13-4Q3LI77 160 aa9.17□□□□□ -0.94
FMR1-207ENST00000439526 PCLOQ9Y6V0 5065 aa9.16□□□□□ -0.94
FMR1-207ENST00000439526 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
FMR1-207ENST00000439526 RNF213Q63HN8 5207 aa8.96□□□□□ -0.98
FMR1-207ENST00000439526 KRTAP12-2P59991 146 aa8.9□□□□□ -0.98
FMR1-207ENST00000439526 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
FMR1-207ENST00000439526 LORP23490 312 aaPredicted RBP8.89□□□□□ -0.99
FMR1-207ENST00000439526 ROMO1P60602 79 aa8.87□□□□□ -0.99
FMR1-207ENST00000439526 FAT4Q6V0I7 4981 aa8.83□□□□□ -1
FMR1-207ENST00000439526 UBR4Q5T4S7 5183 aa8.81□□□□□ -1
FMR1-207ENST00000439526 KRTAP12-1P59990 96 aa8.78□□□□□ -1
FMR1-207ENST00000439526 HMCN2Q8NDA2 5059 aa8.77□□□□□ -1.01
FMR1-207ENST00000439526 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
FMR1-207ENST00000439526 MUC17Q685J3 4493 aa8.69□□□□□ -1.02
FMR1-207ENST00000439526 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
FMR1-207ENST00000439526 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
FMR1-207ENST00000439526 KRTAP19-2Q3LHN2 52 aa8.59□□□□□ -1.03
FMR1-207ENST00000439526 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
FMR1-207ENST00000439526 MT1HP80294 61 aa8.47□□□□□ -1.05
FMR1-207ENST00000439526 FLGP20930 4061 aaPredicted RBP8.46□□□□□ -1.05
FMR1-207ENST00000439526 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
FMR1-207ENST00000439526 MT1FP04733 61 aa8.25□□□□□ -1.09
FMR1-207ENST00000439526 MT2AP02795 61 aa8.24□□□□□ -1.09
FMR1-207ENST00000439526 TNP1P09430 55 aa8.2□□□□□ -1.1
FMR1-207ENST00000439526 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
FMR1-207ENST00000439526 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
FMR1-207ENST00000439526 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
FMR1-207ENST00000439526 FSIP2Q5CZC0 6907 aa7.98□□□□□ -1.13
FMR1-207ENST00000439526 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
FMR1-207ENST00000439526 USH2AO75445 5202 aa7.83□□□□□ -1.16
FMR1-207ENST00000439526 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
FMR1-207ENST00000439526 NDUFAF8A1L188 74 aa7.74□□□□□ -1.17
FMR1-207ENST00000439526 MT1BP07438 61 aa7.74□□□□□ -1.17
FMR1-207ENST00000439526 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
FMR1-207ENST00000439526 LCE3AQ5TA76 89 aa7.7□□□□□ -1.18
FMR1-207ENST00000439526 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
FMR1-207ENST00000439526 LUZP6Q538Z0 58 aa7.66□□□□□ -1.18
FMR1-207ENST00000439526 LCE2BO14633 110 aa7.63□□□□□ -1.19
FMR1-207ENST00000439526 MT1XP80297 61 aa7.6□□□□□ -1.19
FMR1-207ENST00000439526 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
FMR1-207ENST00000439526 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
FMR1-207ENST00000439526 KRTAP10-5P60370 271 aa7.58□□□□□ -1.2
FMR1-207ENST00000439526 KRTAP15-1Q3LI76 137 aa7.55□□□□□ -1.2
FMR1-207ENST00000439526 KRTAP10-7P60409 375 aaPredicted RBP7.52□□□□□ -1.21
FMR1-207ENST00000439526 H3BS24 57 aa7.49□□□□□ -1.21
FMR1-207ENST00000439526 KMT2DO14686 5537 aa7.42□□□□□ -1.22
FMR1-207ENST00000439526 KRTAP12-3P60328 96 aa7.37□□□□□ -1.23
FMR1-207ENST00000439526 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
FMR1-207ENST00000439526 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
FMR1-207ENST00000439526 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
FMR1-207ENST00000439526 KRTAP8-1Q8IUC2 63 aa7.19□□□□□ -1.26
FMR1-207ENST00000439526 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
FMR1-207ENST00000439526 SSPOA2VEC9 5147 aa7.1□□□□□ -1.27
FMR1-207ENST00000439526 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
FMR1-207ENST00000439526 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
FMR1-207ENST00000439526 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
FMR1-207ENST00000439526 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
FMR1-207ENST00000439526 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
FMR1-207ENST00000439526 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
FMR1-207ENST00000439526 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
FMR1-207ENST00000439526 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
FMR1-207ENST00000439526 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
FMR1-207ENST00000439526 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
FMR1-207ENST00000439526 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
FMR1-207ENST00000439526 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
FMR1-207ENST00000439526 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
FMR1-207ENST00000439526 LCE2DQ5TA82 110 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms