RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
BDNF-211ENST00000439476 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
BDNF-211ENST00000439476 PKD1P98161 4303 aa3.33□□□□□ -1.88
BDNF-211ENST00000439476 PLECQ15149 4684 aaKnown RBP3.31□□□□□ -1.88
BDNF-211ENST00000439476 XP32Q5T750 250 aa3.31□□□□□ -1.88
BDNF-211ENST00000439476 KRTAP3-3Q9BYR6 98 aa3.31□□□□□ -1.88
BDNF-211ENST00000439476 KRTAP3-2Q9BYR7 98 aa3.31□□□□□ -1.88
BDNF-211ENST00000439476 DNAH6Q9C0G6 4158 aa3.31□□□□□ -1.88
BDNF-211ENST00000439476 MEGF8Q7Z7M0 2845 aa3.3□□□□□ -1.88
BDNF-211ENST00000439476 KMT2CQ8NEZ4 4911 aaKnown RBP3.29□□□□□ -1.88
BDNF-211ENST00000439476 PKHD1P08F94 4074 aa3.25□□□□□ -1.89
BDNF-211ENST00000439476 RYR3Q15413 4870 aa3.24□□□□□ -1.89
BDNF-211ENST00000439476 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
BDNF-211ENST00000439476 KRTAP3-1Q9BYR8 98 aa3.24□□□□□ -1.89
BDNF-211ENST00000439476 DNAH11Q96DT5 4516 aa3.24□□□□□ -1.89
BDNF-211ENST00000439476 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
BDNF-211ENST00000439476 DNAH8Q96JB1 4490 aa3.21□□□□□ -1.9
BDNF-211ENST00000439476 ALMS1Q8TCU4 4167 aa3.21□□□□□ -1.9
BDNF-211ENST00000439476 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
BDNF-211ENST00000439476 SACSQ9NZJ4 4579 aa3.19□□□□□ -1.9
BDNF-211ENST00000439476 DNAH17Q9UFH2 4485 aa3.18□□□□□ -1.9
BDNF-211ENST00000439476 DNAH5Q8TE73 4624 aa3.17□□□□□ -1.9
BDNF-211ENST00000439476 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
BDNF-211ENST00000439476 KRTAP10-6P60371 365 aaPredicted RBP3.13□□□□□ -1.91
BDNF-211ENST00000439476 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
BDNF-211ENST00000439476 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
BDNF-211ENST00000439476 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
BDNF-211ENST00000439476 A0A1B0GVY2 172 aa3.1□□□□□ -1.91
BDNF-211ENST00000439476 RYR2Q92736 4967 aa3.07□□□□□ -1.92
BDNF-211ENST00000439476 FAT3Q8TDW7 4589 aa3.07□□□□□ -1.92
BDNF-211ENST00000439476 EPPK1P58107 5090 aaKnown RBP3.06□□□□□ -1.92
BDNF-211ENST00000439476 PKHD1L1Q86WI1 4243 aa3.05□□□□□ -1.92
BDNF-211ENST00000439476 INE1O15225 51 aa3.01□□□□□ -1.93
BDNF-211ENST00000439476 LRP1BQ9NZR2 4599 aa3.01□□□□□ -1.93
BDNF-211ENST00000439476 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
BDNF-211ENST00000439476 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
BDNF-211ENST00000439476 HSPG2P98160 4391 aa2.98□□□□□ -1.93
BDNF-211ENST00000439476 APOBP04114 4563 aaKnown RBP2.96□□□□□ -1.94
BDNF-211ENST00000439476 ABCA13Q86UQ4 5058 aa2.94□□□□□ -1.94
BDNF-211ENST00000439476 TNXBP22105 4242 aa2.92□□□□□ -1.94
BDNF-211ENST00000439476 MT1HL1P0DM35 61 aa2.91□□□□□ -1.94
BDNF-211ENST00000439476 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
BDNF-211ENST00000439476 LPAP08519 4548 aa2.89□□□□□ -1.95
BDNF-211ENST00000439476 DYNC1H1Q14204 4646 aaKnown RBP2.88□□□□□ -1.95
BDNF-211ENST00000439476 RYR1P21817 5038 aa2.88□□□□□ -1.95
BDNF-211ENST00000439476 FAT1Q14517 4588 aa2.85□□□□□ -1.95
BDNF-211ENST00000439476 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
BDNF-211ENST00000439476 KRTAP4-5Q9BYR2 181 aa2.82□□□□□ -1.96
BDNF-211ENST00000439476 LORP23490 312 aaPredicted RBP2.81□□□□□ -1.96
BDNF-211ENST00000439476 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
BDNF-211ENST00000439476 LCE2BO14633 110 aa2.78□□□□□ -1.96
BDNF-211ENST00000439476 KIAA1109Q2LD37 5005 aa2.78□□□□□ -1.96
BDNF-211ENST00000439476 MUC2Q02817 5179 aa2.76□□□□□ -1.97
BDNF-211ENST00000439476 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
BDNF-211ENST00000439476 LCE2CQ5TA81 110 aa2.72□□□□□ -1.97
BDNF-211ENST00000439476 HERC1Q15751 4861 aa2.72□□□□□ -1.97
BDNF-211ENST00000439476 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
BDNF-211ENST00000439476 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
BDNF-211ENST00000439476 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
BDNF-211ENST00000439476 HERC2O95714 4834 aa2.68□□□□□ -1.98
BDNF-211ENST00000439476 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
BDNF-211ENST00000439476 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
BDNF-211ENST00000439476 KRTAP19-4Q3LI73 84 aa2.64□□□□□ -1.99
BDNF-211ENST00000439476 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
BDNF-211ENST00000439476 LCE2AQ5TA79 106 aaPredicted RBP2.64□□□□□ -1.99
BDNF-211ENST00000439476 MUC17Q685J3 4493 aa2.62□□□□□ -1.99
BDNF-211ENST00000439476 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
BDNF-211ENST00000439476 LRP2P98164 4655 aa2.6□□□□□ -1.99
BDNF-211ENST00000439476 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
BDNF-211ENST00000439476 RNF213Q63HN8 5207 aa2.58□□□□□ -2
BDNF-211ENST00000439476 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
BDNF-211ENST00000439476 FAT4Q6V0I7 4981 aa2.54□□□□□ -2
BDNF-211ENST00000439476 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
BDNF-211ENST00000439476 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
BDNF-211ENST00000439476 CRCT1Q9UGL9 99 aa2.5□□□□□ -2.01
BDNF-211ENST00000439476 MT2AP02795 61 aa2.47□□□□□ -2.01
BDNF-211ENST00000439476 MT1HP80294 61 aa2.46□□□□□ -2.02
BDNF-211ENST00000439476 KRTAP10-5P60370 271 aa2.46□□□□□ -2.02
BDNF-211ENST00000439476 MT1FP04733 61 aa2.45□□□□□ -2.02
BDNF-211ENST00000439476 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
BDNF-211ENST00000439476 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
BDNF-211ENST00000439476 MT3P25713 68 aa2.39□□□□□ -2.03
BDNF-211ENST00000439476 KRTAP19-2Q3LHN2 52 aa2.39□□□□□ -2.03
BDNF-211ENST00000439476 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
BDNF-211ENST00000439476 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
BDNF-211ENST00000439476 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
BDNF-211ENST00000439476 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
BDNF-211ENST00000439476 MT1XP80297 61 aa2.34□□□□□ -2.04
BDNF-211ENST00000439476 MT1BP07438 61 aa2.32□□□□□ -2.04
BDNF-211ENST00000439476 KRTAP9-8Q9BYQ0 159 aa2.3□□□□□ -2.04
BDNF-211ENST00000439476 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
BDNF-211ENST00000439476 USH2AO75445 5202 aa2.25□□□□□ -2.05
BDNF-211ENST00000439476 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
BDNF-211ENST00000439476 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
BDNF-211ENST00000439476 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
BDNF-211ENST00000439476 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
BDNF-211ENST00000439476 KRTAP4-8A0A0G2JLE6 195 aa2.2□□□□□ -2.06
BDNF-211ENST00000439476 KRTAP4-8Q9BYQ9 185 aa2.2□□□□□ -2.06
BDNF-211ENST00000439476 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
BDNF-211ENST00000439476 MT1GP13640 62 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms