RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
PTPN13-204ENST00000436978 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
PTPN13-204ENST00000436978 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
PTPN13-204ENST00000436978 DNAH7Q8WXX0 4024 aa6.85□□□□□ -1.31
PTPN13-204ENST00000436978 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
PTPN13-204ENST00000436978 DNAH9Q9NYC9 4486 aa6.79□□□□□ -1.32
PTPN13-204ENST00000436978 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
PTPN13-204ENST00000436978 CMYA5Q8N3K9 4069 aa6.73□□□□□ -1.33
PTPN13-204ENST00000436978 DNAH6Q9C0G6 4158 aa6.73□□□□□ -1.33
PTPN13-204ENST00000436978 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
PTPN13-204ENST00000436978 ANK2Q01484 3957 aa6.65□□□□□ -1.35
PTPN13-204ENST00000436978 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
PTPN13-204ENST00000436978 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
PTPN13-204ENST00000436978 VPS13BQ7Z7G8 4022 aa6.54□□□□□ -1.36
PTPN13-204ENST00000436978 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
PTPN13-204ENST00000436978 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
PTPN13-204ENST00000436978 FAT2Q9NYQ8 4349 aa6.52□□□□□ -1.37
PTPN13-204ENST00000436978 LYSTQ99698 3801 aa6.52□□□□□ -1.37
PTPN13-204ENST00000436978 FRAS1Q86XX4 4008 aa6.48□□□□□ -1.37
PTPN13-204ENST00000436978 DYNC2H1Q8NCM8 4307 aaKnown RBP6.46□□□□□ -1.38
PTPN13-204ENST00000436978 MT1HP80294 61 aa6.45□□□□□ -1.38
PTPN13-204ENST00000436978 VPS13DQ5THJ4 4388 aa6.44□□□□□ -1.38
PTPN13-204ENST00000436978 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.38
PTPN13-204ENST00000436978 PRKDCP78527 4128 aaKnown RBP6.39□□□□□ -1.39
PTPN13-204ENST00000436978 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
PTPN13-204ENST00000436978 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
PTPN13-204ENST00000436978 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
PTPN13-204ENST00000436978 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
PTPN13-204ENST00000436978 KRTAP4-1Q9BYQ7 146 aa6.33□□□□□ -1.4
PTPN13-204ENST00000436978 DNAH17Q9UFH2 4485 aa6.31□□□□□ -1.4
PTPN13-204ENST00000436978 DNAH5Q8TE73 4624 aa6.29□□□□□ -1.4
PTPN13-204ENST00000436978 MT2AP02795 61 aa6.27□□□□□ -1.41
PTPN13-204ENST00000436978 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
PTPN13-204ENST00000436978 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
PTPN13-204ENST00000436978 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
PTPN13-204ENST00000436978 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
PTPN13-204ENST00000436978 MT1FP04733 61 aa6.11□□□□□ -1.43
PTPN13-204ENST00000436978 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
PTPN13-204ENST00000436978 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
PTPN13-204ENST00000436978 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
PTPN13-204ENST00000436978 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
PTPN13-204ENST00000436978 DYNC1H1Q14204 4646 aaKnown RBP6.02□□□□□ -1.45
PTPN13-204ENST00000436978 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
PTPN13-204ENST00000436978 SACSQ9NZJ4 4579 aa5.85□□□□□ -1.47
PTPN13-204ENST00000436978 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.48
PTPN13-204ENST00000436978 SPRR2EP22531 72 aa5.82□□□□□ -1.48
PTPN13-204ENST00000436978 SPRR2BP35325 72 aa5.82□□□□□ -1.48
PTPN13-204ENST00000436978 SPRR2AP35326 72 aa5.82□□□□□ -1.48
PTPN13-204ENST00000436978 PKHD1P08F94 4074 aa5.74□□□□□ -1.49
PTPN13-204ENST00000436978 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
PTPN13-204ENST00000436978 FAT1Q14517 4588 aa5.68□□□□□ -1.5
PTPN13-204ENST00000436978 SPRR2DP22532 72 aa5.66□□□□□ -1.5
PTPN13-204ENST00000436978 MT1XP80297 61 aa5.65□□□□□ -1.5
PTPN13-204ENST00000436978 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
PTPN13-204ENST00000436978 LCE2BO14633 110 aa5.64□□□□□ -1.51
PTPN13-204ENST00000436978 APOBP04114 4563 aaKnown RBP5.64□□□□□ -1.51
PTPN13-204ENST00000436978 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
PTPN13-204ENST00000436978 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
PTPN13-204ENST00000436978 HSPG2P98160 4391 aa5.59□□□□□ -1.52
PTPN13-204ENST00000436978 TNXBP22105 4242 aa5.59□□□□□ -1.52
PTPN13-204ENST00000436978 DNHD1Q96M86 4753 aa5.58□□□□□ -1.52
PTPN13-204ENST00000436978 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
PTPN13-204ENST00000436978 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
PTPN13-204ENST00000436978 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
PTPN13-204ENST00000436978 PKD1P98161 4303 aa5.52□□□□□ -1.53
PTPN13-204ENST00000436978 MT1BP07438 61 aa5.51□□□□□ -1.53
PTPN13-204ENST00000436978 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
PTPN13-204ENST00000436978 MT1GP13640 62 aa5.48□□□□□ -1.53
PTPN13-204ENST00000436978 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
PTPN13-204ENST00000436978 RYR3Q15413 4870 aa5.41□□□□□ -1.54
PTPN13-204ENST00000436978 RYR1P21817 5038 aa5.4□□□□□ -1.54
PTPN13-204ENST00000436978 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
PTPN13-204ENST00000436978 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
PTPN13-204ENST00000436978 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
PTPN13-204ENST00000436978 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
PTPN13-204ENST00000436978 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
PTPN13-204ENST00000436978 MYCBP2O75592 4640 aa5.27□□□□□ -1.57
PTPN13-204ENST00000436978 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
PTPN13-204ENST00000436978 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
PTPN13-204ENST00000436978 MT1LQ93083 61 aa5.2□□□□□ -1.58
PTPN13-204ENST00000436978 LPAP08519 4548 aa5.19□□□□□ -1.58
PTPN13-204ENST00000436978 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
PTPN13-204ENST00000436978 RYR2Q92736 4967 aa5.13□□□□□ -1.59
PTPN13-204ENST00000436978 MT1EP04732 61 aa5.13□□□□□ -1.59
PTPN13-204ENST00000436978 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-204ENST00000436978 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
PTPN13-204ENST00000436978 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
PTPN13-204ENST00000436978 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
PTPN13-204ENST00000436978 MT1MQ8N339 61 aa4.98□□□□□ -1.61
PTPN13-204ENST00000436978 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
PTPN13-204ENST00000436978 LRP2P98164 4655 aa4.97□□□□□ -1.61
PTPN13-204ENST00000436978 MT3P25713 68 aa4.96□□□□□ -1.62
PTPN13-204ENST00000436978 MT4P47944 62 aa4.91□□□□□ -1.62
PTPN13-204ENST00000436978 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
PTPN13-204ENST00000436978 HERC1Q15751 4861 aa4.85□□□□□ -1.63
PTPN13-204ENST00000436978 PCLOQ9Y6V0 5065 aa4.74□□□□□ -1.65
PTPN13-204ENST00000436978 HERC2O95714 4834 aa4.74□□□□□ -1.65
PTPN13-204ENST00000436978 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
PTPN13-204ENST00000436978 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.65
PTPN13-204ENST00000436978 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 365.6 ms