RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
GAPVD1-209ENST00000436712 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
GAPVD1-209ENST00000436712 A0A1B0GVY2 172 aa4.31□□□□□ -1.72
GAPVD1-209ENST00000436712 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
GAPVD1-209ENST00000436712 Q8N1X5 172 aa4.31□□□□□ -1.72
GAPVD1-209ENST00000436712 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
GAPVD1-209ENST00000436712 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
GAPVD1-209ENST00000436712 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
GAPVD1-209ENST00000436712 FAT1Q14517 4588 aa4.29□□□□□ -1.72
GAPVD1-209ENST00000436712 EPPK1P58107 5090 aaKnown RBP4.28□□□□□ -1.72
GAPVD1-209ENST00000436712 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
GAPVD1-209ENST00000436712 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
GAPVD1-209ENST00000436712 KIAA1109Q2LD37 5005 aa4.22□□□□□ -1.73
GAPVD1-209ENST00000436712 LCE2BO14633 110 aa4.22□□□□□ -1.73
GAPVD1-209ENST00000436712 HSPG2P98160 4391 aa4.21□□□□□ -1.74
GAPVD1-209ENST00000436712 BIRC6Q9NR09 4857 aa4.19□□□□□ -1.74
GAPVD1-209ENST00000436712 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
GAPVD1-209ENST00000436712 RYR1P21817 5038 aa4.18□□□□□ -1.74
GAPVD1-209ENST00000436712 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
GAPVD1-209ENST00000436712 XP32Q5T750 250 aa4.16□□□□□ -1.74
GAPVD1-209ENST00000436712 A0A0D9SG42 100 aa4.15□□□□□ -1.74
GAPVD1-209ENST00000436712 Q5VSD8 79 aa4.15□□□□□ -1.75
GAPVD1-209ENST00000436712 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
GAPVD1-209ENST00000436712 KRTAP10-4P60372 401 aaPredicted RBP4.14□□□□□ -1.75
GAPVD1-209ENST00000436712 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
GAPVD1-209ENST00000436712 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
GAPVD1-209ENST00000436712 MYCBP2O75592 4640 aa4.14□□□□□ -1.75
GAPVD1-209ENST00000436712 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
GAPVD1-209ENST00000436712 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
GAPVD1-209ENST00000436712 S4R3F8 94 aa4.13□□□□□ -1.75
GAPVD1-209ENST00000436712 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
GAPVD1-209ENST00000436712 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
GAPVD1-209ENST00000436712 KRTAP4-5Q9BYR2 181 aa4.07□□□□□ -1.76
GAPVD1-209ENST00000436712 DMBT1Q9UGM3 2413 aaPredicted RBP4.07□□□□□ -1.76
GAPVD1-209ENST00000436712 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
GAPVD1-209ENST00000436712 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
GAPVD1-209ENST00000436712 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
GAPVD1-209ENST00000436712 FAT3Q8TDW7 4589 aa4.04□□□□□ -1.76
GAPVD1-209ENST00000436712 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
GAPVD1-209ENST00000436712 TNXBP22105 4242 aa4.03□□□□□ -1.76
GAPVD1-209ENST00000436712 KRTAP12-1P59990 96 aa4□□□□□ -1.77
GAPVD1-209ENST00000436712 HERC2O95714 4834 aa3.99□□□□□ -1.77
GAPVD1-209ENST00000436712 LORP23490 312 aaPredicted RBP3.96□□□□□ -1.78
GAPVD1-209ENST00000436712 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
GAPVD1-209ENST00000436712 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
GAPVD1-209ENST00000436712 KRTAP10-8P60410 259 aa3.95□□□□□ -1.78
GAPVD1-209ENST00000436712 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
GAPVD1-209ENST00000436712 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
GAPVD1-209ENST00000436712 R4GN34 69 aa3.88□□□□□ -1.79
GAPVD1-209ENST00000436712 LPAP08519 4548 aa3.86□□□□□ -1.79
GAPVD1-209ENST00000436712 HERC1Q15751 4861 aa3.86□□□□□ -1.79
GAPVD1-209ENST00000436712 INE1O15225 51 aa3.84□□□□□ -1.79
GAPVD1-209ENST00000436712 M0QZ58 72 aa3.82□□□□□ -1.8
GAPVD1-209ENST00000436712 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
GAPVD1-209ENST00000436712 LRP2P98164 4655 aa3.82□□□□□ -1.8
GAPVD1-209ENST00000436712 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
GAPVD1-209ENST00000436712 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
GAPVD1-209ENST00000436712 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
GAPVD1-209ENST00000436712 MUC2Q02817 5179 aa3.67□□□□□ -1.82
GAPVD1-209ENST00000436712 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
GAPVD1-209ENST00000436712 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
GAPVD1-209ENST00000436712 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
GAPVD1-209ENST00000436712 MUC17Q685J3 4493 aa3.59□□□□□ -1.83
GAPVD1-209ENST00000436712 FAT4Q6V0I7 4981 aa3.51□□□□□ -1.85
GAPVD1-209ENST00000436712 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
GAPVD1-209ENST00000436712 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
GAPVD1-209ENST00000436712 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
GAPVD1-209ENST00000436712 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
GAPVD1-209ENST00000436712 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
GAPVD1-209ENST00000436712 TNP1P09430 55 aa3.42□□□□□ -1.86
GAPVD1-209ENST00000436712 M0R2T5 61 aa3.36□□□□□ -1.87
GAPVD1-209ENST00000436712 MT1HP80294 61 aa3.34□□□□□ -1.88
GAPVD1-209ENST00000436712 KRTAP10-10P60014 251 aa3.25□□□□□ -1.89
GAPVD1-209ENST00000436712 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
GAPVD1-209ENST00000436712 MT2AP02795 61 aa3.2□□□□□ -1.9
GAPVD1-209ENST00000436712 MT1FP04733 61 aa3.2□□□□□ -1.9
GAPVD1-209ENST00000436712 KRTAP9-8Q9BYQ0 159 aa3.19□□□□□ -1.9
GAPVD1-209ENST00000436712 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.9
GAPVD1-209ENST00000436712 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.91
GAPVD1-209ENST00000436712 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
GAPVD1-209ENST00000436712 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
GAPVD1-209ENST00000436712 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
GAPVD1-209ENST00000436712 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
GAPVD1-209ENST00000436712 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
GAPVD1-209ENST00000436712 USH2AO75445 5202 aa3.08□□□□□ -1.92
GAPVD1-209ENST00000436712 SPRR2GQ9BYE4 73 aa3.08□□□□□ -1.92
GAPVD1-209ENST00000436712 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
GAPVD1-209ENST00000436712 FSIP2Q5CZC0 6907 aa3.04□□□□□ -1.92
GAPVD1-209ENST00000436712 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
GAPVD1-209ENST00000436712 MT1BP07438 61 aa3□□□□□ -1.93
GAPVD1-209ENST00000436712 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
GAPVD1-209ENST00000436712 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
GAPVD1-209ENST00000436712 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
GAPVD1-209ENST00000436712 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
GAPVD1-209ENST00000436712 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
GAPVD1-209ENST00000436712 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
GAPVD1-209ENST00000436712 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
GAPVD1-209ENST00000436712 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
GAPVD1-209ENST00000436712 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
GAPVD1-209ENST00000436712 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms