RNA–Protein interactions for RNA: ENST00000435817.6

FCHSD1-201, Transcript of FCH and double SH3 domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCHSD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-201ENST00000435817 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
FCHSD1-201ENST00000435817 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.42
FCHSD1-201ENST00000435817 MYCBP2O75592 4640 aa6.2□□□□□ -1.42
FCHSD1-201ENST00000435817 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
FCHSD1-201ENST00000435817 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
FCHSD1-201ENST00000435817 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
FCHSD1-201ENST00000435817 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
FCHSD1-201ENST00000435817 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
FCHSD1-201ENST00000435817 RYR1P21817 5038 aa6.13□□□□□ -1.43
FCHSD1-201ENST00000435817 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
FCHSD1-201ENST00000435817 TNP1P09430 55 aa6.11□□□□□ -1.43
FCHSD1-201ENST00000435817 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
FCHSD1-201ENST00000435817 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
FCHSD1-201ENST00000435817 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
FCHSD1-201ENST00000435817 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
FCHSD1-201ENST00000435817 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
FCHSD1-201ENST00000435817 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
FCHSD1-201ENST00000435817 FAT3Q8TDW7 4589 aa6.07□□□□□ -1.44
FCHSD1-201ENST00000435817 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
FCHSD1-201ENST00000435817 SACSQ9NZJ4 4579 aa6.05□□□□□ -1.44
FCHSD1-201ENST00000435817 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
FCHSD1-201ENST00000435817 HECTD4Q9Y4D8 3996 aa6.04□□□□□ -1.44
FCHSD1-201ENST00000435817 RYR3Q15413 4870 aa6.04□□□□□ -1.44
FCHSD1-201ENST00000435817 KMT2CQ8NEZ4 4911 aaKnown RBP6.04□□□□□ -1.44
FCHSD1-201ENST00000435817 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
FCHSD1-201ENST00000435817 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
FCHSD1-201ENST00000435817 FAT2Q9NYQ8 4349 aa5.92□□□□□ -1.46
FCHSD1-201ENST00000435817 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
FCHSD1-201ENST00000435817 KRTAP17-1Q9BYP8 105 aa5.9□□□□□ -1.47
FCHSD1-201ENST00000435817 RYR2Q92736 4967 aa5.87□□□□□ -1.47
FCHSD1-201ENST00000435817 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
FCHSD1-201ENST00000435817 KRTAP13-4Q3LI77 160 aa5.83□□□□□ -1.48
FCHSD1-201ENST00000435817 KRTAP10-6P60371 365 aaPredicted RBP5.83□□□□□ -1.48
FCHSD1-201ENST00000435817 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
FCHSD1-201ENST00000435817 LRP2P98164 4655 aa5.76□□□□□ -1.49
FCHSD1-201ENST00000435817 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
FCHSD1-201ENST00000435817 PKD1P98161 4303 aa5.72□□□□□ -1.49
FCHSD1-201ENST00000435817 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
FCHSD1-201ENST00000435817 HERC2O95714 4834 aa5.69□□□□□ -1.5
FCHSD1-201ENST00000435817 EPPK1P58107 5090 aaKnown RBP5.68□□□□□ -1.5
FCHSD1-201ENST00000435817 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
FCHSD1-201ENST00000435817 HSPG2P98160 4391 aa5.65□□□□□ -1.51
FCHSD1-201ENST00000435817 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
FCHSD1-201ENST00000435817 LPAP08519 4548 aa5.59□□□□□ -1.51
FCHSD1-201ENST00000435817 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
FCHSD1-201ENST00000435817 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
FCHSD1-201ENST00000435817 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
FCHSD1-201ENST00000435817 MUC2Q02817 5179 aa5.38□□□□□ -1.55
FCHSD1-201ENST00000435817 PCLOQ9Y6V0 5065 aa5.37□□□□□ -1.55
FCHSD1-201ENST00000435817 HERC1Q15751 4861 aa5.35□□□□□ -1.55
FCHSD1-201ENST00000435817 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
FCHSD1-201ENST00000435817 TNXBP22105 4242 aa5.32□□□□□ -1.56
FCHSD1-201ENST00000435817 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
FCHSD1-201ENST00000435817 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
FCHSD1-201ENST00000435817 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
FCHSD1-201ENST00000435817 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.58
FCHSD1-201ENST00000435817 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
FCHSD1-201ENST00000435817 MT1HP80294 61 aa5.14□□□□□ -1.59
FCHSD1-201ENST00000435817 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
FCHSD1-201ENST00000435817 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
FCHSD1-201ENST00000435817 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
FCHSD1-201ENST00000435817 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
FCHSD1-201ENST00000435817 MT2AP02795 61 aa5.07□□□□□ -1.6
FCHSD1-201ENST00000435817 MT1FP04733 61 aa5.06□□□□□ -1.6
FCHSD1-201ENST00000435817 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
FCHSD1-201ENST00000435817 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
FCHSD1-201ENST00000435817 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
FCHSD1-201ENST00000435817 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
FCHSD1-201ENST00000435817 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
FCHSD1-201ENST00000435817 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
FCHSD1-201ENST00000435817 KRTAP19-2Q3LHN2 52 aa4.88□□□□□ -1.63
FCHSD1-201ENST00000435817 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
FCHSD1-201ENST00000435817 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.64
FCHSD1-201ENST00000435817 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
FCHSD1-201ENST00000435817 USH2AO75445 5202 aa4.69□□□□□ -1.66
FCHSD1-201ENST00000435817 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
FCHSD1-201ENST00000435817 MT1BP07438 61 aa4.67□□□□□ -1.66
FCHSD1-201ENST00000435817 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
FCHSD1-201ENST00000435817 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
FCHSD1-201ENST00000435817 MT1XP80297 61 aa4.63□□□□□ -1.67
FCHSD1-201ENST00000435817 INE1O15225 51 aa4.62□□□□□ -1.67
FCHSD1-201ENST00000435817 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
FCHSD1-201ENST00000435817 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
FCHSD1-201ENST00000435817 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
FCHSD1-201ENST00000435817 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
FCHSD1-201ENST00000435817 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
FCHSD1-201ENST00000435817 LCE2BO14633 110 aa4.56□□□□□ -1.68
FCHSD1-201ENST00000435817 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
FCHSD1-201ENST00000435817 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
FCHSD1-201ENST00000435817 KMT2DO14686 5537 aa4.48□□□□□ -1.69
FCHSD1-201ENST00000435817 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
FCHSD1-201ENST00000435817 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
FCHSD1-201ENST00000435817 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
FCHSD1-201ENST00000435817 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
FCHSD1-201ENST00000435817 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
FCHSD1-201ENST00000435817 MT1GP13640 62 aa4.26□□□□□ -1.73
FCHSD1-201ENST00000435817 SPRR2EP22531 72 aa4.24□□□□□ -1.73
FCHSD1-201ENST00000435817 SPRR2BP35325 72 aa4.24□□□□□ -1.73
FCHSD1-201ENST00000435817 SPRR2AP35326 72 aa4.24□□□□□ -1.73
FCHSD1-201ENST00000435817 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms