RNA–Protein interactions for RNA: ENST00000433360.5

PPP1R9A-206, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-206ENST00000433360 PKD1L1Q8TDX9 2849 aa2.54□□□□□ -2
PPP1R9A-206ENST00000433360 CUBNO60494 3623 aa2.54□□□□□ -2
PPP1R9A-206ENST00000433360 FAT2Q9NYQ8 4349 aa2.53□□□□□ -2
PPP1R9A-206ENST00000433360 DNAH17Q9UFH2 4485 aa2.53□□□□□ -2.01
PPP1R9A-206ENST00000433360 KRTAP10-6P60371 365 aaPredicted RBP2.53□□□□□ -2.01
PPP1R9A-206ENST00000433360 KRTAP10-12P60413 245 aa2.53□□□□□ -2.01
PPP1R9A-206ENST00000433360 PKHD1P08F94 4074 aa2.52□□□□□ -2.01
PPP1R9A-206ENST00000433360 MEGF8Q7Z7M0 2845 aa2.52□□□□□ -2.01
PPP1R9A-206ENST00000433360 TRRAPQ9Y4A5 3859 aa2.52□□□□□ -2.01
PPP1R9A-206ENST00000433360 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
PPP1R9A-206ENST00000433360 MT1HL1P0DM35 61 aa2.51□□□□□ -2.01
PPP1R9A-206ENST00000433360 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
PPP1R9A-206ENST00000433360 LYSTQ99698 3801 aa2.48□□□□□ -2.01
PPP1R9A-206ENST00000433360 LCE2AQ5TA79 106 aaPredicted RBP2.48□□□□□ -2.01
PPP1R9A-206ENST00000433360 VPS13DQ5THJ4 4388 aa2.48□□□□□ -2.01
PPP1R9A-206ENST00000433360 DNAH8Q96JB1 4490 aa2.47□□□□□ -2.01
PPP1R9A-206ENST00000433360 LORP23490 312 aaPredicted RBP2.46□□□□□ -2.02
PPP1R9A-206ENST00000433360 HECTD4Q9Y4D8 3996 aa2.46□□□□□ -2.02
PPP1R9A-206ENST00000433360 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
PPP1R9A-206ENST00000433360 KMT2AQ03164 3969 aa2.44□□□□□ -2.02
PPP1R9A-206ENST00000433360 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
PPP1R9A-206ENST00000433360 DNAH2Q9P225 4427 aa2.42□□□□□ -2.02
PPP1R9A-206ENST00000433360 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
PPP1R9A-206ENST00000433360 VPS13BQ7Z7G8 4022 aa2.39□□□□□ -2.03
PPP1R9A-206ENST00000433360 DNAH10Q8IVF4 4471 aa2.38□□□□□ -2.03
PPP1R9A-206ENST00000433360 CRCT1Q9UGL9 99 aa2.38□□□□□ -2.03
PPP1R9A-206ENST00000433360 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
PPP1R9A-206ENST00000433360 PKD1P98161 4303 aa2.36□□□□□ -2.03
PPP1R9A-206ENST00000433360 SACSQ9NZJ4 4579 aa2.36□□□□□ -2.03
PPP1R9A-206ENST00000433360 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
PPP1R9A-206ENST00000433360 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
PPP1R9A-206ENST00000433360 KRTAP19-4Q3LI73 84 aa2.35□□□□□ -2.03
PPP1R9A-206ENST00000433360 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
PPP1R9A-206ENST00000433360 PLECQ15149 4684 aaKnown RBP2.34□□□□□ -2.04
PPP1R9A-206ENST00000433360 DNAH11Q96DT5 4516 aa2.33□□□□□ -2.04
PPP1R9A-206ENST00000433360 TNXBP22105 4242 aa2.33□□□□□ -2.04
PPP1R9A-206ENST00000433360 KRTAP17-1Q9BYP8 105 aa2.31□□□□□ -2.04
PPP1R9A-206ENST00000433360 KMT2CQ8NEZ4 4911 aaKnown RBP2.31□□□□□ -2.04
PPP1R9A-206ENST00000433360 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
PPP1R9A-206ENST00000433360 KRTAP4-5Q9BYR2 181 aa2.31□□□□□ -2.04
PPP1R9A-206ENST00000433360 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
PPP1R9A-206ENST00000433360 HSPG2P98160 4391 aa2.29□□□□□ -2.04
PPP1R9A-206ENST00000433360 RYR3Q15413 4870 aa2.29□□□□□ -2.04
PPP1R9A-206ENST00000433360 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
PPP1R9A-206ENST00000433360 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
PPP1R9A-206ENST00000433360 CSMD3Q7Z407 3707 aa2.27□□□□□ -2.05
PPP1R9A-206ENST00000433360 RYR2Q92736 4967 aa2.26□□□□□ -2.05
PPP1R9A-206ENST00000433360 KRTAP10-5P60370 271 aa2.26□□□□□ -2.05
PPP1R9A-206ENST00000433360 FAT1Q14517 4588 aa2.25□□□□□ -2.05
PPP1R9A-206ENST00000433360 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
PPP1R9A-206ENST00000433360 DNAH5Q8TE73 4624 aa2.24□□□□□ -2.05
PPP1R9A-206ENST00000433360 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
PPP1R9A-206ENST00000433360 MT1HP80294 61 aa2.21□□□□□ -2.06
PPP1R9A-206ENST00000433360 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
PPP1R9A-206ENST00000433360 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
PPP1R9A-206ENST00000433360 HYDINQ4G0P3 5121 aa2.19□□□□□ -2.06
PPP1R9A-206ENST00000433360 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
PPP1R9A-206ENST00000433360 MT2AP02795 61 aa2.18□□□□□ -2.06
PPP1R9A-206ENST00000433360 MUC17Q685J3 4493 aa2.16□□□□□ -2.06
PPP1R9A-206ENST00000433360 KIAA1109Q2LD37 5005 aa2.16□□□□□ -2.06
PPP1R9A-206ENST00000433360 HERC2O95714 4834 aa2.14□□□□□ -2.07
PPP1R9A-206ENST00000433360 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
PPP1R9A-206ENST00000433360 RYR1P21817 5038 aa2.13□□□□□ -2.07
PPP1R9A-206ENST00000433360 PCLOQ9Y6V0 5065 aa2.12□□□□□ -2.07
PPP1R9A-206ENST00000433360 KRTAP4-1Q9BYQ7 146 aa2.12□□□□□ -2.07
PPP1R9A-206ENST00000433360 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
PPP1R9A-206ENST00000433360 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
PPP1R9A-206ENST00000433360 MT1FP04733 61 aa2.09□□□□□ -2.07
PPP1R9A-206ENST00000433360 ABCA13Q86UQ4 5058 aa2.08□□□□□ -2.08
PPP1R9A-206ENST00000433360 KRTAP19-8Q3LI54 63 aa2.06□□□□□ -2.08
PPP1R9A-206ENST00000433360 SPRR2EP22531 72 aa2.05□□□□□ -2.08
PPP1R9A-206ENST00000433360 SPRR2BP35325 72 aa2.05□□□□□ -2.08
PPP1R9A-206ENST00000433360 SPRR2AP35326 72 aa2.05□□□□□ -2.08
PPP1R9A-206ENST00000433360 HERC1Q15751 4861 aa2.04□□□□□ -2.08
PPP1R9A-206ENST00000433360 FLGP20930 4061 aaPredicted RBP2.02□□□□□ -2.09
PPP1R9A-206ENST00000433360 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
PPP1R9A-206ENST00000433360 SPRR2DP22532 72 aa2□□□□□ -2.09
PPP1R9A-206ENST00000433360 MYCBP2O75592 4640 aa2□□□□□ -2.09
PPP1R9A-206ENST00000433360 MT1GP13640 62 aa1.97□□□□□ -2.09
PPP1R9A-206ENST00000433360 LRP1Q07954 4544 aaKnown RBP1.96□□□□□ -2.1
PPP1R9A-206ENST00000433360 UBR4Q5T4S7 5183 aa1.94□□□□□ -2.1
PPP1R9A-206ENST00000433360 KRTAP19-1Q8IUB9 90 aa1.94□□□□□ -2.1
PPP1R9A-206ENST00000433360 MT1XP80297 61 aa1.93□□□□□ -2.1
PPP1R9A-206ENST00000433360 MT3P25713 68 aa1.92□□□□□ -2.1
PPP1R9A-206ENST00000433360 KRTAP9-6A0A140TA67 174 aa1.92□□□□□ -2.1
PPP1R9A-206ENST00000433360 LCE3BQ5TA77 95 aa1.91□□□□□ -2.1
PPP1R9A-206ENST00000433360 MT1BP07438 61 aa1.9□□□□□ -2.1
PPP1R9A-206ENST00000433360 KRTAP9-2Q9BYQ4 174 aa1.9□□□□□ -2.1
PPP1R9A-206ENST00000433360 LRP2P98164 4655 aa1.9□□□□□ -2.11
PPP1R9A-206ENST00000433360 HMCN2Q8NDA2 5059 aa1.89□□□□□ -2.11
PPP1R9A-206ENST00000433360 LCE4AQ5TA78 99 aa1.89□□□□□ -2.11
PPP1R9A-206ENST00000433360 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
PPP1R9A-206ENST00000433360 KRTAP9-8Q9BYQ0 159 aa1.87□□□□□ -2.11
PPP1R9A-206ENST00000433360 RNF213Q63HN8 5207 aa1.87□□□□□ -2.11
PPP1R9A-206ENST00000433360 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
PPP1R9A-206ENST00000433360 KRTAP9-3Q9BYQ3 159 aa1.86□□□□□ -2.11
PPP1R9A-206ENST00000433360 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
PPP1R9A-206ENST00000433360 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
PPP1R9A-206ENST00000433360 KRTAP9-7A8MTY7 169 aa1.85□□□□□ -2.11
PPP1R9A-206ENST00000433360 LPAP08519 4548 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms