RNA–Protein interactions for RNA: ENST00000433360.5

PPP1R9A-206, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-206ENST00000433360 DCAF8L2P0C7V8 631 aa9.41□□□□□ -0.9
PPP1R9A-206ENST00000433360 NISCHQ9Y2I1 1504 aa8.91□□□□□ -0.98
PPP1R9A-206ENST00000433360 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
PPP1R9A-206ENST00000433360 FAM9AQ8IZU1 332 aaPredicted RBP8.87□□□□□ -0.99
PPP1R9A-206ENST00000433360 SUPT5HO00267 1087 aaKnown RBP8.81□□□□□ -1
PPP1R9A-206ENST00000433360 APLP2Q06481 763 aa8.76□□□□□ -1.01
PPP1R9A-206ENST00000433360 SHROOM4Q9ULL8 1493 aa8.58□□□□□ -1.04
PPP1R9A-206ENST00000433360 CCER1Q8TC90 406 aaPredicted RBP8.47□□□□□ -1.05
PPP1R9A-206ENST00000433360 EHMT2Q96KQ7 1210 aa8.43□□□□□ -1.06
PPP1R9A-206ENST00000433360 ZEB1P37275 1124 aaPredicted RBP8.41□□□□□ -1.06
PPP1R9A-206ENST00000433360 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
PPP1R9A-206ENST00000433360 CENPBP07199 599 aaPredicted RBP8.35□□□□□ -1.07
PPP1R9A-206ENST00000433360 TRIM41Q8WV44 630 aa8.3□□□□□ -1.08
PPP1R9A-206ENST00000433360 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
PPP1R9A-206ENST00000433360 NEFLP07196 543 aa8.25□□□□□ -1.09
PPP1R9A-206ENST00000433360 UBTFP17480 764 aaKnown RBP8.24□□□□□ -1.09
PPP1R9A-206ENST00000433360 PCGF6Q9BYE7 350 aa8.22□□□□□ -1.09
PPP1R9A-206ENST00000433360 RANGAP1P46060 587 aaPredicted RBP8.18□□□□□ -1.1
PPP1R9A-206ENST00000433360 TTBK1Q5TCY1 1321 aaPredicted RBP8.18□□□□□ -1.1
PPP1R9A-206ENST00000433360 MYT1Q01538 1121 aa8.13□□□□□ -1.11
PPP1R9A-206ENST00000433360 MYT1LQ9UL68 1186 aa8.11□□□□□ -1.11
PPP1R9A-206ENST00000433360 DAXXQ9UER7 740 aaPredicted RBP8.07□□□□□ -1.12
PPP1R9A-206ENST00000433360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.05□□□□□ -1.12
PPP1R9A-206ENST00000433360 HNRNPUL2Q1KMD3 747 aaKnown RBP8.05□□□□□ -1.12
PPP1R9A-206ENST00000433360 YTHDC1Q96MU7 727 aaKnown RBP8.02□□□□□ -1.13
PPP1R9A-206ENST00000433360 TRIM26Q12899 539 aaPredicted RBP7.97□□□□□ -1.13
PPP1R9A-206ENST00000433360 POLR3GLQ9BT43 218 aa7.91□□□□□ -1.14
PPP1R9A-206ENST00000433360 ITGAEP38570 1179 aa7.88□□□□□ -1.15
PPP1R9A-206ENST00000433360 SLC4A1APQ9BWU0 796 aaKnown RBP7.87□□□□□ -1.15
PPP1R9A-206ENST00000433360 CHIC1Q5VXU3 224 aa7.85□□□□□ -1.15
PPP1R9A-206ENST00000433360 CCDC180Q9P1Z9 1646 aa7.84□□□□□ -1.15
PPP1R9A-206ENST00000433360 ZNF316A6NFI3 1004 aaPredicted RBP7.84□□□□□ -1.15
PPP1R9A-206ENST00000433360 ZBTB47Q9UFB7 747 aaPredicted RBP7.82□□□□□ -1.16
PPP1R9A-206ENST00000433360 CLSPNQ9HAW4 1339 aa7.82□□□□□ -1.16
PPP1R9A-206ENST00000433360 RTL5Q5HYW3 569 aaPredicted RBP7.8□□□□□ -1.16
PPP1R9A-206ENST00000433360 NEFMP07197 916 aa7.78□□□□□ -1.16
PPP1R9A-206ENST00000433360 TRIM52Q96A61 297 aa7.78□□□□□ -1.16
PPP1R9A-206ENST00000433360 FAM50AQ14320 339 aaKnown RBP7.77□□□□□ -1.17
PPP1R9A-206ENST00000433360 HRCP23327 699 aa7.77□□□□□ -1.17
PPP1R9A-206ENST00000433360 PPARGC1BQ86YN6 1023 aaKnown RBP7.77□□□□□ -1.17
PPP1R9A-206ENST00000433360 CDK11AQ9UQ88 783 aaPredicted RBP7.72□□□□□ -1.17
PPP1R9A-206ENST00000433360 ABCC9O60706 1549 aa7.7□□□□□ -1.18
PPP1R9A-206ENST00000433360 ANP32CO43423 234 aa7.7□□□□□ -1.18
PPP1R9A-206ENST00000433360 ESF1Q9H501 851 aaKnown RBP7.69□□□□□ -1.18
PPP1R9A-206ENST00000433360 CNGB1Q14028 1251 aaPredicted RBP7.67□□□□□ -1.18
PPP1R9A-206ENST00000433360 BCANQ96GW7 911 aa7.67□□□□□ -1.18
PPP1R9A-206ENST00000433360 CANXP27824 592 aaKnown RBP7.66□□□□□ -1.18
PPP1R9A-206ENST00000433360 FBLN2P98095 1184 aa7.66□□□□□ -1.18
PPP1R9A-206ENST00000433360 PABPN1Q86U42 306 aaKnown RBP eCLIP7.65□□□□□ -1.18
PPP1R9A-206ENST00000433360 DIEXFQ68CQ4 756 aaKnown RBP7.65□□□□□ -1.18
PPP1R9A-206ENST00000433360 NPM1P06748 294 aaKnown RBP eCLIP7.63□□□□□ -1.19
PPP1R9A-206ENST00000433360 LOC105371045A0A1W2PR82 267 aa7.63□□□□□ -1.19
PPP1R9A-206ENST00000433360 NEUROD1Q13562 356 aa7.62□□□□□ -1.19
PPP1R9A-206ENST00000433360 ZNF326Q5BKZ1 582 aaKnown RBP7.62□□□□□ -1.19
PPP1R9A-206ENST00000433360 SLC24A1O60721 1099 aa7.6□□□□□ -1.19
PPP1R9A-206ENST00000433360 ACIN1Q9UKV3 1341 aaKnown RBP7.59□□□□□ -1.19
PPP1R9A-206ENST00000433360 STAG3Q9UJ98 1225 aa7.58□□□□□ -1.2
PPP1R9A-206ENST00000433360 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
PPP1R9A-206ENST00000433360 ANP32BQ92688 251 aaKnown RBP7.54□□□□□ -1.2
PPP1R9A-206ENST00000433360 ANP32AP39687 249 aaKnown RBP7.53□□□□□ -1.2
PPP1R9A-206ENST00000433360 AEBP2Q6ZN18 517 aaPredicted RBP7.53□□□□□ -1.2
PPP1R9A-206ENST00000433360 ZNF777Q9ULD5 760 aaPredicted RBP7.53□□□□□ -1.2
PPP1R9A-206ENST00000433360 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
PPP1R9A-206ENST00000433360 TONSLQ96HA7 1378 aa7.5□□□□□ -1.21
PPP1R9A-206ENST00000433360 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.5□□□□□ -1.21
PPP1R9A-206ENST00000433360 MYO15BQ96JP2 1530 aa7.48□□□□□ -1.21
PPP1R9A-206ENST00000433360 CHGAP10645 457 aaKnown RBP7.47□□□□□ -1.21
PPP1R9A-206ENST00000433360 HSP90AA1P07900 732 aaKnown RBP7.46□□□□□ -1.21
PPP1R9A-206ENST00000433360 P3H3Q8IVL6 736 aa7.46□□□□□ -1.22
PPP1R9A-206ENST00000433360 ZCCHC6Q5VYS8 1495 aaKnown RBP7.46□□□□□ -1.22
PPP1R9A-206ENST00000433360 TSPY4P0CV99 314 aa7.46□□□□□ -1.22
PPP1R9A-206ENST00000433360 TSPY10P0CW01 314 aa7.46□□□□□ -1.22
PPP1R9A-206ENST00000433360 EIF5BO60841 1220 aaKnown RBP7.45□□□□□ -1.22
PPP1R9A-206ENST00000433360 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
PPP1R9A-206ENST00000433360 SCRIBQ14160 1630 aa7.44□□□□□ -1.22
PPP1R9A-206ENST00000433360 MYH16Q9H6N6 1097 aa7.42□□□□□ -1.22
PPP1R9A-206ENST00000433360 DCAF1Q9Y4B6 1507 aa7.42□□□□□ -1.22
PPP1R9A-206ENST00000433360 WDR43Q15061 677 aaKnown RBP eCLIP7.42□□□□□ -1.22
PPP1R9A-206ENST00000433360 ARID3CA6NKF2 412 aa7.42□□□□□ -1.22
PPP1R9A-206ENST00000433360 CDK11BP21127 795 aaKnown RBP7.42□□□□□ -1.22
PPP1R9A-206ENST00000433360 RSF1Q96T23 1441 aaPredicted RBP7.41□□□□□ -1.22
PPP1R9A-206ENST00000433360 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
PPP1R9A-206ENST00000433360 BCL11AQ9H165 835 aa7.4□□□□□ -1.23
PPP1R9A-206ENST00000433360 MTUS2Q5JR59 1369 aa7.39□□□□□ -1.23
PPP1R9A-206ENST00000433360 CDCA8Q53HL2 280 aa7.38□□□□□ -1.23
PPP1R9A-206ENST00000433360 TMC1Q8TDI8 760 aa7.37□□□□□ -1.23
PPP1R9A-206ENST00000433360 GTF3C3Q9Y5Q9 886 aa7.37□□□□□ -1.23
PPP1R9A-206ENST00000433360 EEA1Q15075 1411 aa7.37□□□□□ -1.23
PPP1R9A-206ENST00000433360 PPP1R15AO75807 674 aaPredicted RBP7.37□□□□□ -1.23
PPP1R9A-206ENST00000433360 RB1CC1Q8TDY2 1594 aa7.35□□□□□ -1.23
PPP1R9A-206ENST00000433360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.35□□□□□ -1.234e-7■■■□□ 15.3
PPP1R9A-206ENST00000433360 ANP32EQ9BTT0 268 aa7.35□□□□□ -1.23
PPP1R9A-206ENST00000433360 CFAP53Q96M91 514 aa7.35□□□□□ -1.23
PPP1R9A-206ENST00000433360 PLEKHD1A6NEE1 506 aa7.34□□□□□ -1.23
PPP1R9A-206ENST00000433360 HNRNPUQ00839 825 aaKnown RBP eCLIP7.33□□□□□ -1.24
PPP1R9A-206ENST00000433360 GLIPR1L2Q4G1C9 344 aa7.33□□□□□ -1.24
PPP1R9A-206ENST00000433360 SCAF1Q9H7N4 1312 aaKnown RBP7.33□□□□□ -1.24
PPP1R9A-206ENST00000433360 NCLP19338 710 aaKnown RBP7.33□□□□□ -1.24
PPP1R9A-206ENST00000433360 PLPPR3Q6T4P5 718 aa7.33□□□□□ -1.24
PPP1R9A-206ENST00000433360 CHMP4BQ9H444 224 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms