RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 LRBAP50851 2863 aa0.64□□□□□ -2.31
CLK1-204ENST00000432425 ASPMQ8IZT6 3477 aa0.64□□□□□ -2.31
CLK1-204ENST00000432425 COL12A1Q99715 3063 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 SACSQ9NZJ4 4579 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 HIVEP3Q5T1R4 2406 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 M0R2T5 61 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 DEFB4AO15263 64 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 DEFB124Q8NES8 71 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 SMR3AQ99954 134 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 ATMQ13315 3056 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 DNAH8Q96JB1 4490 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 ANKHD1Q8IWZ3 2542 aaKnown RBP0.63□□□□□ -2.31
CLK1-204ENST00000432425 KMT2AQ03164 3969 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 LAMA5O15230 3695 aa0.63□□□□□ -2.31
CLK1-204ENST00000432425 APCP25054 2843 aa0.62□□□□□ -2.31
CLK1-204ENST00000432425 GCN1Q92616 2671 aaKnown RBP0.62□□□□□ -2.31
CLK1-204ENST00000432425 VPS13BQ7Z7G8 4022 aa0.62□□□□□ -2.31
CLK1-204ENST00000432425 RIF1Q5UIP0 2472 aaKnown RBP0.62□□□□□ -2.31
CLK1-204ENST00000432425 MAP1AP78559 2803 aaPredicted RBP0.62□□□□□ -2.31
CLK1-204ENST00000432425 A0A096LNI7 61 aa0.62□□□□□ -2.31
CLK1-204ENST00000432425 HTN3P15516 51 aa0.62□□□□□ -2.31
CLK1-204ENST00000432425 CUBNO60494 3623 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 MUC3AQ02505 3323 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 TEX15Q9BXT5 2789 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 TLN1Q9Y490 2541 aaKnown RBP0.61□□□□□ -2.31
CLK1-204ENST00000432425 TLN2Q9Y4G6 2542 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 SETXQ7Z333 2677 aaKnown RBP0.61□□□□□ -2.31
CLK1-204ENST00000432425 ADGRG4Q8IZF6 3080 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 ANK3Q12955 4377 aaKnown RBP0.61□□□□□ -2.31
CLK1-204ENST00000432425 SVEP1Q4LDE5 3571 aa0.61□□□□□ -2.31
CLK1-204ENST00000432425 TNXBP22105 4242 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 PRM1P04553 51 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 FRAS1Q86XX4 4008 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 USP9XQ93008 2570 aaPredicted RBP0.6□□□□□ -2.31
CLK1-204ENST00000432425 CEP295Q9C0D2 2601 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 ANKRD11Q6UB99 2663 aaPredicted RBP0.6□□□□□ -2.31
CLK1-204ENST00000432425 NF1P21359 2839 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 CSMD2Q7Z408 3487 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 DOPEY1Q5JWR5 2465 aa0.6□□□□□ -2.31
CLK1-204ENST00000432425 PRKDCP78527 4128 aaKnown RBP0.6□□□□□ -2.31
CLK1-204ENST00000432425 TNP1P09430 55 aa0.59□□□□□ -2.31
CLK1-204ENST00000432425 SPINK6Q6UWN8 80 aa0.59□□□□□ -2.31
CLK1-204ENST00000432425 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.31
CLK1-204ENST00000432425 FLNCQ14315 2725 aa0.59□□□□□ -2.31
CLK1-204ENST00000432425 AKAP9Q99996 3911 aa0.59□□□□□ -2.31
CLK1-204ENST00000432425 ACANP16112 2415 aa0.59□□□□□ -2.32
CLK1-204ENST00000432425 LRRK2Q5S007 2527 aa0.59□□□□□ -2.32
CLK1-204ENST00000432425 H3BNG1 76 aa0.59□□□□□ -2.32
CLK1-204ENST00000432425 DNAH1Q9P2D7 4330 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 USP24Q9UPU5 2620 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 USP9YO00507 2555 aaPredicted RBP0.58□□□□□ -2.32
CLK1-204ENST00000432425 STAB1Q9NY15 2570 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 PKHD1L1Q86WI1 4243 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 SPART-AS1P0CW21 52 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 LINC01556Q5JQF7 62 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 VPS13CQ709C8 3753 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 DYNC2H1Q8NCM8 4307 aaKnown RBP0.58□□□□□ -2.32
CLK1-204ENST00000432425 EPG5Q9HCE0 2579 aa0.58□□□□□ -2.32
CLK1-204ENST00000432425 DNAH17Q9UFH2 4485 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 PKD1L1Q8TDX9 2849 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 MTORP42345 2549 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 DNAH9Q9NYC9 4486 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 ZANQ9Y493 2812 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 DNAH10Q8IVF4 4471 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 MXRA5Q9NR99 2828 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 HIVEP1P15822 2718 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 CFAP46Q8IYW2 2715 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 HSPG2P98160 4391 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 KMT2DO14686 5537 aa0.57□□□□□ -2.32
CLK1-204ENST00000432425 ACACBO00763 2458 aa0.56□□□□□ -2.32
CLK1-204ENST00000432425 MYO9AB2RTY4 2548 aa0.56□□□□□ -2.32
CLK1-204ENST00000432425 UTP20O75691 2785 aaKnown RBP0.56□□□□□ -2.32
CLK1-204ENST00000432425 CACNA1AO00555 2505 aa0.56□□□□□ -2.32
CLK1-204ENST00000432425 DNAH2Q9P225 4427 aa0.56□□□□□ -2.32
CLK1-204ENST00000432425 ITPR3Q14573 2671 aa0.55□□□□□ -2.32
CLK1-204ENST00000432425 COL7A1Q02388 2944 aa0.55□□□□□ -2.32
CLK1-204ENST00000432425 C9orf92A6NGG3 77 aa0.55□□□□□ -2.32
CLK1-204ENST00000432425 NSD1Q96L73 2696 aaPredicted RBP0.55□□□□□ -2.32
CLK1-204ENST00000432425 CENPEQ02224 2701 aa0.54□□□□□ -2.32
CLK1-204ENST00000432425 HECTD4Q9Y4D8 3996 aa0.54□□□□□ -2.32
CLK1-204ENST00000432425 DNAH3Q8TD57 4116 aa0.54□□□□□ -2.32
CLK1-204ENST00000432425 NIPBLQ6KC79 2804 aaeCLIP0.54□□□□□ -2.32
CLK1-204ENST00000432425 FAT3Q8TDW7 4589 aa0.54□□□□□ -2.32
CLK1-204ENST00000432425 DNAH7Q8WXX0 4024 aa0.53□□□□□ -2.32
CLK1-204ENST00000432425 STAB2Q8WWQ8 2551 aa0.53□□□□□ -2.32
CLK1-204ENST00000432425 TRRAPQ9Y4A5 3859 aa0.53□□□□□ -2.32
CLK1-204ENST00000432425 HUWE1Q7Z6Z7 4374 aaKnown RBP0.53□□□□□ -2.32
CLK1-204ENST00000432425 NBEAL1Q6ZS30 2694 aa0.53□□□□□ -2.33
CLK1-204ENST00000432425 FLNAP21333 2647 aaKnown RBP0.53□□□□□ -2.33
CLK1-204ENST00000432425 TGP01266 2768 aa0.52□□□□□ -2.33
CLK1-204ENST00000432425 MYO18BQ8IUG5 2567 aa0.52□□□□□ -2.33
CLK1-204ENST00000432425 FASNP49327 2511 aaKnown RBP0.52□□□□□ -2.33
CLK1-204ENST00000432425 FLNBO75369 2602 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms