RNA–Protein interactions for RNA: ENST00000428670.7

ATP2B1-204, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATP2B1, Length 7,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-204ENST00000428670 FRAS1Q86XX4 4008 aa3.99□□□□□ -1.77
ATP2B1-204ENST00000428670 KRTAP3-3Q9BYR6 98 aa3.99□□□□□ -1.77
ATP2B1-204ENST00000428670 CMYA5Q8N3K9 4069 aa3.99□□□□□ -1.77
ATP2B1-204ENST00000428670 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
ATP2B1-204ENST00000428670 DNAH3Q8TD57 4116 aa3.96□□□□□ -1.77
ATP2B1-204ENST00000428670 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.77
ATP2B1-204ENST00000428670 DNHD1Q96M86 4753 aa3.96□□□□□ -1.78
ATP2B1-204ENST00000428670 DNAH7Q8WXX0 4024 aa3.95□□□□□ -1.78
ATP2B1-204ENST00000428670 KRTAP3-2Q9BYR7 98 aa3.95□□□□□ -1.78
ATP2B1-204ENST00000428670 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
ATP2B1-204ENST00000428670 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
ATP2B1-204ENST00000428670 DNAH8Q96JB1 4490 aa3.94□□□□□ -1.78
ATP2B1-204ENST00000428670 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
ATP2B1-204ENST00000428670 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
ATP2B1-204ENST00000428670 FAT1Q14517 4588 aa3.91□□□□□ -1.78
ATP2B1-204ENST00000428670 VPS13BQ7Z7G8 4022 aa3.91□□□□□ -1.78
ATP2B1-204ENST00000428670 LRP1BQ9NZR2 4599 aa3.9□□□□□ -1.78
ATP2B1-204ENST00000428670 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.79
ATP2B1-204ENST00000428670 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
ATP2B1-204ENST00000428670 KRTAP15-1Q3LI76 137 aa3.87□□□□□ -1.79
ATP2B1-204ENST00000428670 HECTD4Q9Y4D8 3996 aa3.86□□□□□ -1.79
ATP2B1-204ENST00000428670 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
ATP2B1-204ENST00000428670 DYNC1H1Q14204 4646 aaKnown RBP3.8□□□□□ -1.8
ATP2B1-204ENST00000428670 FAT2Q9NYQ8 4349 aa3.77□□□□□ -1.81
ATP2B1-204ENST00000428670 MYCBP2O75592 4640 aa3.76□□□□□ -1.81
ATP2B1-204ENST00000428670 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
ATP2B1-204ENST00000428670 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.81
ATP2B1-204ENST00000428670 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
ATP2B1-204ENST00000428670 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
ATP2B1-204ENST00000428670 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
ATP2B1-204ENST00000428670 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
ATP2B1-204ENST00000428670 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
ATP2B1-204ENST00000428670 RYR1P21817 5038 aa3.65□□□□□ -1.82
ATP2B1-204ENST00000428670 HYDINQ4G0P3 5121 aa3.64□□□□□ -1.83
ATP2B1-204ENST00000428670 APOBP04114 4563 aaKnown RBP3.63□□□□□ -1.83
ATP2B1-204ENST00000428670 KRTAP17-1Q9BYP8 105 aa3.62□□□□□ -1.83
ATP2B1-204ENST00000428670 KIAA1109Q2LD37 5005 aa3.57□□□□□ -1.84
ATP2B1-204ENST00000428670 RYR3Q15413 4870 aa3.54□□□□□ -1.84
ATP2B1-204ENST00000428670 PKD1P98161 4303 aa3.53□□□□□ -1.84
ATP2B1-204ENST00000428670 LRP2P98164 4655 aa3.51□□□□□ -1.85
ATP2B1-204ENST00000428670 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
ATP2B1-204ENST00000428670 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
ATP2B1-204ENST00000428670 HSPG2P98160 4391 aa3.47□□□□□ -1.85
ATP2B1-204ENST00000428670 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
ATP2B1-204ENST00000428670 LPAP08519 4548 aa3.43□□□□□ -1.86
ATP2B1-204ENST00000428670 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
ATP2B1-204ENST00000428670 INE1O15225 51 aa3.42□□□□□ -1.86
ATP2B1-204ENST00000428670 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
ATP2B1-204ENST00000428670 MT1HP80294 61 aa3.41□□□□□ -1.86
ATP2B1-204ENST00000428670 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
ATP2B1-204ENST00000428670 RYR2Q92736 4967 aa3.4□□□□□ -1.86
ATP2B1-204ENST00000428670 PKHD1L1Q86WI1 4243 aa3.37□□□□□ -1.87
ATP2B1-204ENST00000428670 MT2AP02795 61 aa3.37□□□□□ -1.87
ATP2B1-204ENST00000428670 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
ATP2B1-204ENST00000428670 TNXBP22105 4242 aa3.36□□□□□ -1.87
ATP2B1-204ENST00000428670 MT1FP04733 61 aa3.35□□□□□ -1.87
ATP2B1-204ENST00000428670 HERC2O95714 4834 aa3.3□□□□□ -1.88
ATP2B1-204ENST00000428670 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.89
ATP2B1-204ENST00000428670 LCE2CQ5TA81 110 aa3.19□□□□□ -1.9
ATP2B1-204ENST00000428670 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
ATP2B1-204ENST00000428670 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
ATP2B1-204ENST00000428670 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
ATP2B1-204ENST00000428670 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
ATP2B1-204ENST00000428670 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
ATP2B1-204ENST00000428670 EPPK1P58107 5090 aaKnown RBP3.16□□□□□ -1.9
ATP2B1-204ENST00000428670 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.9
ATP2B1-204ENST00000428670 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
ATP2B1-204ENST00000428670 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
ATP2B1-204ENST00000428670 MT1XP80297 61 aa3.13□□□□□ -1.91
ATP2B1-204ENST00000428670 MT1BP07438 61 aa3.12□□□□□ -1.91
ATP2B1-204ENST00000428670 ABCA13Q86UQ4 5058 aa3.08□□□□□ -1.92
ATP2B1-204ENST00000428670 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
ATP2B1-204ENST00000428670 MUC17Q685J3 4493 aa3.08□□□□□ -1.92
ATP2B1-204ENST00000428670 MUC2Q02817 5179 aa3.08□□□□□ -1.92
ATP2B1-204ENST00000428670 HERC1Q15751 4861 aa3.05□□□□□ -1.92
ATP2B1-204ENST00000428670 PCLOQ9Y6V0 5065 aa3.05□□□□□ -1.92
ATP2B1-204ENST00000428670 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
ATP2B1-204ENST00000428670 KRTAP9-3Q9BYQ3 159 aa3.03□□□□□ -1.92
ATP2B1-204ENST00000428670 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.93
ATP2B1-204ENST00000428670 KRTAP4-8Q9BYQ9 185 aa3.03□□□□□ -1.93
ATP2B1-204ENST00000428670 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
ATP2B1-204ENST00000428670 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
ATP2B1-204ENST00000428670 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
ATP2B1-204ENST00000428670 LCE2BO14633 110 aa2.94□□□□□ -1.94
ATP2B1-204ENST00000428670 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
ATP2B1-204ENST00000428670 RNF213Q63HN8 5207 aa2.9□□□□□ -1.95
ATP2B1-204ENST00000428670 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
ATP2B1-204ENST00000428670 KRTAP4-7Q9BYR0 210 aa2.88□□□□□ -1.95
ATP2B1-204ENST00000428670 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
ATP2B1-204ENST00000428670 MT1GP13640 62 aa2.85□□□□□ -1.95
ATP2B1-204ENST00000428670 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
ATP2B1-204ENST00000428670 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
ATP2B1-204ENST00000428670 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
ATP2B1-204ENST00000428670 MT1LQ93083 61 aa2.77□□□□□ -1.97
ATP2B1-204ENST00000428670 MT1EP04732 61 aa2.76□□□□□ -1.97
ATP2B1-204ENST00000428670 LCE2AQ5TA79 106 aaPredicted RBP2.72□□□□□ -1.97
ATP2B1-204ENST00000428670 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
ATP2B1-204ENST00000428670 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
ATP2B1-204ENST00000428670 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
ATP2B1-204ENST00000428670 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 313 ms