RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 ABCA13Q86UQ4 5058 aa12.17□□□□□ -0.46
LSM8-203ENST00000422760 RPL37P61927 97 aaKnown RBP12.17□□□□□ -0.46
LSM8-203ENST00000422760 COX6B2Q6YFQ2 88 aa12.14□□□□□ -0.47
LSM8-203ENST00000422760 KRTAP3-1Q9BYR8 98 aa12.14□□□□□ -0.47
LSM8-203ENST00000422760 RBM12B-AS1Q9P1G2 102 aa12.12□□□□□ -0.47
LSM8-203ENST00000422760 BIRC6Q9NR09 4857 aa12.12□□□□□ -0.47
LSM8-203ENST00000422760 HERC2O95714 4834 aa12.07□□□□□ -0.48
LSM8-203ENST00000422760 TPRXLQ17RH7 258 aa12.04□□□□□ -0.48
LSM8-203ENST00000422760 A0A1B0GU33 70 aa11.99□□□□□ -0.49
LSM8-203ENST00000422760 J3QL48 77 aa11.95□□□□□ -0.5
LSM8-203ENST00000422760 H1FX-AS1Q4G0G2 97 aa11.95□□□□□ -0.5
LSM8-203ENST00000422760 H0YAA0 97 aa11.91□□□□□ -0.5
LSM8-203ENST00000422760 LPAP08519 4548 aa11.89□□□□□ -0.51
LSM8-203ENST00000422760 LRP2P98164 4655 aa11.88□□□□□ -0.51
LSM8-203ENST00000422760 PRAC1Q96KF2 57 aa11.78□□□□□ -0.52
LSM8-203ENST00000422760 K7ERS5 55 aa11.74□□□□□ -0.53
LSM8-203ENST00000422760 ADM2Q7Z4H4 148 aa11.74□□□□□ -0.53
LSM8-203ENST00000422760 S4R3F8 94 aa11.68□□□□□ -0.54
LSM8-203ENST00000422760 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
LSM8-203ENST00000422760 PCLOQ9Y6V0 5065 aa11.66□□□□□ -0.54
LSM8-203ENST00000422760 LINC01554Q52M75 96 aa11.61□□□□□ -0.55
LSM8-203ENST00000422760 SEC61BP60468 96 aaKnown RBP11.59□□□□□ -0.55
LSM8-203ENST00000422760 CSAG1Q6PB30 78 aa11.58□□□□□ -0.56
LSM8-203ENST00000422760 KRTAP10-6P60371 365 aaPredicted RBP11.57□□□□□ -0.56
LSM8-203ENST00000422760 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
LSM8-203ENST00000422760 HERC1Q15751 4861 aa11.44□□□□□ -0.58
LSM8-203ENST00000422760 MUC17Q685J3 4493 aa11.42□□□□□ -0.58
LSM8-203ENST00000422760 KRTAP25-1Q3LHN0 102 aa11.41□□□□□ -0.58
LSM8-203ENST00000422760 KRTAP4-1Q9BYQ7 146 aa11.41□□□□□ -0.58
LSM8-203ENST00000422760 HMCN2Q8NDA2 5059 aa11.35□□□□□ -0.59
LSM8-203ENST00000422760 ROMO1P60602 79 aa11.34□□□□□ -0.59
LSM8-203ENST00000422760 KRTAP13-4Q3LI77 160 aa11.32□□□□□ -0.6
LSM8-203ENST00000422760 P0C880 135 aa11.27□□□□□ -0.6
LSM8-203ENST00000422760 M0QZ58 72 aa11.23□□□□□ -0.61
LSM8-203ENST00000422760 A0A0D9SG42 100 aa11.21□□□□□ -0.61
LSM8-203ENST00000422760 MUC2Q02817 5179 aa11.14□□□□□ -0.63
LSM8-203ENST00000422760 KRTAP19-2Q3LHN2 52 aa11.13□□□□□ -0.63
LSM8-203ENST00000422760 H3BS24 57 aa11.03□□□□□ -0.64
LSM8-203ENST00000422760 KRTAP12-1P59990 96 aa11.01□□□□□ -0.65
LSM8-203ENST00000422760 KRTAP12-2P59991 146 aa10.99□□□□□ -0.65
LSM8-203ENST00000422760 SPINT4Q6UDR6 99 aa10.91□□□□□ -0.66
LSM8-203ENST00000422760 CRIPTQ9P021 101 aa10.9□□□□□ -0.66
LSM8-203ENST00000422760 FLGP20930 4061 aaPredicted RBP10.9□□□□□ -0.66
LSM8-203ENST00000422760 UBR4Q5T4S7 5183 aa10.87□□□□□ -0.67
LSM8-203ENST00000422760 RNF213Q63HN8 5207 aa10.81□□□□□ -0.68
LSM8-203ENST00000422760 R4GN34 69 aa10.81□□□□□ -0.68
LSM8-203ENST00000422760 LCE2CQ5TA81 110 aa10.74□□□□□ -0.69
LSM8-203ENST00000422760 FAT4Q6V0I7 4981 aa10.66□□□□□ -0.7
LSM8-203ENST00000422760 C10orf95Q9H7T3 257 aa10.63□□□□□ -0.71
LSM8-203ENST00000422760 LORP23490 312 aaPredicted RBP10.62□□□□□ -0.71
LSM8-203ENST00000422760 MT1HP80294 61 aa10.5□□□□□ -0.73
LSM8-203ENST00000422760 M0R2T5 61 aa10.44□□□□□ -0.74
LSM8-203ENST00000422760 KRTAP15-1Q3LI76 137 aa10.34□□□□□ -0.75
LSM8-203ENST00000422760 PP632Q6XCG6 107 aa10.27□□□□□ -0.77
LSM8-203ENST00000422760 CAMK2N1Q7Z7J9 78 aa10.24□□□□□ -0.77
LSM8-203ENST00000422760 MT2AP02795 61 aa10.17□□□□□ -0.78
LSM8-203ENST00000422760 KRTAP9-8Q9BYQ0 159 aa10.15□□□□□ -0.78
LSM8-203ENST00000422760 MT1FP04733 61 aa10.14□□□□□ -0.79
LSM8-203ENST00000422760 SPRR2GQ9BYE4 73 aa10.1□□□□□ -0.79
LSM8-203ENST00000422760 KRTAP10-10P60014 251 aa10.09□□□□□ -0.79
LSM8-203ENST00000422760 KRTAP19-1Q8IUB9 90 aa10.07□□□□□ -0.8
LSM8-203ENST00000422760 KRTAP23-1A1A580 65 aa10.03□□□□□ -0.8
LSM8-203ENST00000422760 PLAC4Q8WY50 150 aa9.99□□□□□ -0.81
LSM8-203ENST00000422760 TNP1P09430 55 aa9.94□□□□□ -0.82
LSM8-203ENST00000422760 NDUFAF8A1L188 74 aa9.92□□□□□ -0.82
LSM8-203ENST00000422760 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
LSM8-203ENST00000422760 KRTAP19-8Q3LI54 63 aa9.77□□□□□ -0.85
LSM8-203ENST00000422760 KRTAP9-3Q9BYQ3 159 aa9.77□□□□□ -0.85
LSM8-203ENST00000422760 MT1BP07438 61 aa9.66□□□□□ -0.86
LSM8-203ENST00000422760 LUZP6Q538Z0 58 aa9.6□□□□□ -0.87
LSM8-203ENST00000422760 A0A0A0MQY5 61 aa9.52□□□□□ -0.89
LSM8-203ENST00000422760 LCE2BO14633 110 aa9.47□□□□□ -0.89
LSM8-203ENST00000422760 MT1XP80297 61 aa9.43□□□□□ -0.9
LSM8-203ENST00000422760 KRTAP10-5P60370 271 aa9.42□□□□□ -0.9
LSM8-203ENST00000422760 SPRR5A0A1B0GTR4 108 aa9.41□□□□□ -0.9
LSM8-203ENST00000422760 USH2AO75445 5202 aa9.25□□□□□ -0.93
LSM8-203ENST00000422760 LCE3AQ5TA76 89 aa9.25□□□□□ -0.93
LSM8-203ENST00000422760 PRO2289Q9P1D8 64 aa9.22□□□□□ -0.93
LSM8-203ENST00000422760 KRTAP8-1Q8IUC2 63 aa9.21□□□□□ -0.94
LSM8-203ENST00000422760 KRTAP10-7P60409 375 aaPredicted RBP9.09□□□□□ -0.95
LSM8-203ENST00000422760 KRTAP10-12P60413 245 aa9.05□□□□□ -0.96
LSM8-203ENST00000422760 KRTAP12-3P60328 96 aa8.91□□□□□ -0.98
LSM8-203ENST00000422760 SSPOA2VEC9 5147 aa8.9□□□□□ -0.99
LSM8-203ENST00000422760 KRTAP19-6Q3LI70 58 aa8.76□□□□□ -1.01
LSM8-203ENST00000422760 LCE2DQ5TA82 110 aaPredicted RBP8.74□□□□□ -1.01
LSM8-203ENST00000422760 FSIP2Q5CZC0 6907 aa8.73□□□□□ -1.01
LSM8-203ENST00000422760 KMT2DO14686 5537 aa8.72□□□□□ -1.01
LSM8-203ENST00000422760 KRTAP4-8A0A0G2JLE6 195 aa8.66□□□□□ -1.02
LSM8-203ENST00000422760 KRTAP4-8Q9BYQ9 185 aa8.66□□□□□ -1.02
LSM8-203ENST00000422760 KRTAP19-5Q3LI72 72 aa8.59□□□□□ -1.03
LSM8-203ENST00000422760 KRTAP19-4Q3LI73 84 aa8.43□□□□□ -1.06
LSM8-203ENST00000422760 FCGBPQ9Y6R7 5405 aaPredicted RBP8.42□□□□□ -1.06
LSM8-203ENST00000422760 KRTAP19-7Q3SYF9 63 aa8.41□□□□□ -1.06
LSM8-203ENST00000422760 LCE3CQ5T5A8 94 aa8.39□□□□□ -1.07
LSM8-203ENST00000422760 INE1O15225 51 aa8.33□□□□□ -1.08
LSM8-203ENST00000422760 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
LSM8-203ENST00000422760 MT1EP04732 61 aa8.23□□□□□ -1.09
LSM8-203ENST00000422760 MT1LQ93083 61 aa8.11□□□□□ -1.11
LSM8-203ENST00000422760 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
LSM8-203ENST00000422760 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms