RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 DYNC1H1Q14204 4646 aaKnown RBP8.57□□□□□ -1.04
PKP4-204ENST00000421462 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
PKP4-204ENST00000421462 NDUFAF8A1L188 74 aa8.56□□□□□ -1.04
PKP4-204ENST00000421462 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
PKP4-204ENST00000421462 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
PKP4-204ENST00000421462 KRTAP10-8P60410 259 aa8.5□□□□□ -1.05
PKP4-204ENST00000421462 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
PKP4-204ENST00000421462 S4R3F8 94 aa8.49□□□□□ -1.05
PKP4-204ENST00000421462 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
PKP4-204ENST00000421462 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.06
PKP4-204ENST00000421462 HSPG2P98160 4391 aa8.45□□□□□ -1.06
PKP4-204ENST00000421462 LRP1Q07954 4544 aaKnown RBP8.44□□□□□ -1.06
PKP4-204ENST00000421462 APOBP04114 4563 aaKnown RBP8.39□□□□□ -1.07
PKP4-204ENST00000421462 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
PKP4-204ENST00000421462 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
PKP4-204ENST00000421462 KRTAP15-1Q3LI76 137 aa8.35□□□□□ -1.07
PKP4-204ENST00000421462 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
PKP4-204ENST00000421462 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
PKP4-204ENST00000421462 XP32Q5T750 250 aa8.27□□□□□ -1.09
PKP4-204ENST00000421462 KMT2CQ8NEZ4 4911 aaKnown RBP8.24□□□□□ -1.09
PKP4-204ENST00000421462 LPAP08519 4548 aa8.22□□□□□ -1.09
PKP4-204ENST00000421462 A0A1B0GVY2 172 aa8.16□□□□□ -1.1
PKP4-204ENST00000421462 TNXBP22105 4242 aa8.1□□□□□ -1.11
PKP4-204ENST00000421462 M0QZ58 72 aa8.09□□□□□ -1.12
PKP4-204ENST00000421462 LRP2P98164 4655 aa8.08□□□□□ -1.12
PKP4-204ENST00000421462 Q5VSD8 79 aa8.06□□□□□ -1.12
PKP4-204ENST00000421462 RYR2Q92736 4967 aa8.05□□□□□ -1.12
PKP4-204ENST00000421462 R4GN34 69 aa8.01□□□□□ -1.13
PKP4-204ENST00000421462 RYR3Q15413 4870 aa7.95□□□□□ -1.14
PKP4-204ENST00000421462 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
PKP4-204ENST00000421462 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
PKP4-204ENST00000421462 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
PKP4-204ENST00000421462 KIAA1109Q2LD37 5005 aa7.82□□□□□ -1.16
PKP4-204ENST00000421462 RYR1P21817 5038 aa7.79□□□□□ -1.16
PKP4-204ENST00000421462 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
PKP4-204ENST00000421462 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
PKP4-204ENST00000421462 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
PKP4-204ENST00000421462 CAMK2N1Q7Z7J9 78 aa7.72□□□□□ -1.17
PKP4-204ENST00000421462 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.17
PKP4-204ENST00000421462 ABCA13Q86UQ4 5058 aa7.66□□□□□ -1.18
PKP4-204ENST00000421462 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
PKP4-204ENST00000421462 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
PKP4-204ENST00000421462 PP632Q6XCG6 107 aa7.46□□□□□ -1.22
PKP4-204ENST00000421462 MUC2Q02817 5179 aa7.45□□□□□ -1.22
PKP4-204ENST00000421462 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
PKP4-204ENST00000421462 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
PKP4-204ENST00000421462 TNP1P09430 55 aa7.32□□□□□ -1.24
PKP4-204ENST00000421462 J3QL48 77 aa7.27□□□□□ -1.25
PKP4-204ENST00000421462 HERC2O95714 4834 aa7.27□□□□□ -1.25
PKP4-204ENST00000421462 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
PKP4-204ENST00000421462 BIRC6Q9NR09 4857 aa7.08□□□□□ -1.28
PKP4-204ENST00000421462 PCLOQ9Y6V0 5065 aa7.08□□□□□ -1.28
PKP4-204ENST00000421462 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
PKP4-204ENST00000421462 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
PKP4-204ENST00000421462 HERC1Q15751 4861 aa7.02□□□□□ -1.29
PKP4-204ENST00000421462 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
PKP4-204ENST00000421462 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
PKP4-204ENST00000421462 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
PKP4-204ENST00000421462 M0R2T5 61 aa6.89□□□□□ -1.31
PKP4-204ENST00000421462 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
PKP4-204ENST00000421462 RNF213Q63HN8 5207 aa6.72□□□□□ -1.33
PKP4-204ENST00000421462 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
PKP4-204ENST00000421462 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.33
PKP4-204ENST00000421462 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.33
PKP4-204ENST00000421462 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
PKP4-204ENST00000421462 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
PKP4-204ENST00000421462 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
PKP4-204ENST00000421462 MT1FP04733 61 aa6.57□□□□□ -1.36
PKP4-204ENST00000421462 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
PKP4-204ENST00000421462 KRTAP12-3P60328 96 aa6.54□□□□□ -1.36
PKP4-204ENST00000421462 INE1O15225 51 aa6.53□□□□□ -1.36
PKP4-204ENST00000421462 MT2AP02795 61 aa6.51□□□□□ -1.37
PKP4-204ENST00000421462 MT1HP80294 61 aa6.49□□□□□ -1.37
PKP4-204ENST00000421462 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
PKP4-204ENST00000421462 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
PKP4-204ENST00000421462 MT1XP80297 61 aa6.42□□□□□ -1.38
PKP4-204ENST00000421462 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
PKP4-204ENST00000421462 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
PKP4-204ENST00000421462 MT1BP07438 61 aa6.36□□□□□ -1.39
PKP4-204ENST00000421462 KMT2DO14686 5537 aa6.31□□□□□ -1.4
PKP4-204ENST00000421462 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
PKP4-204ENST00000421462 USH2AO75445 5202 aa6.2□□□□□ -1.42
PKP4-204ENST00000421462 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
PKP4-204ENST00000421462 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
PKP4-204ENST00000421462 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
PKP4-204ENST00000421462 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
PKP4-204ENST00000421462 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
PKP4-204ENST00000421462 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
PKP4-204ENST00000421462 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
PKP4-204ENST00000421462 LCE2BO14633 110 aa5.86□□□□□ -1.47
PKP4-204ENST00000421462 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
PKP4-204ENST00000421462 KRTAP2-3P0C7H8 128 aa5.74□□□□□ -1.49
PKP4-204ENST00000421462 KRTAP2-4Q9BYR9 128 aa5.74□□□□□ -1.49
PKP4-204ENST00000421462 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
PKP4-204ENST00000421462 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
PKP4-204ENST00000421462 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
PKP4-204ENST00000421462 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
PKP4-204ENST00000421462 MT1LQ93083 61 aa5.57□□□□□ -1.52
PKP4-204ENST00000421462 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
PKP4-204ENST00000421462 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms