RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 A8MUU9 505 aa6.28□□□□□ -1.4
RFFL-205ENST00000415395 C9orf92A6NGG3 77 aa6.27□□□□□ -1.41
RFFL-205ENST00000415395 J3QL48 77 aa6.23□□□□□ -1.41
RFFL-205ENST00000415395 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.42
RFFL-205ENST00000415395 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
RFFL-205ENST00000415395 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
RFFL-205ENST00000415395 XP32Q5T750 250 aa6.16□□□□□ -1.42
RFFL-205ENST00000415395 RPL37P61927 97 aaKnown RBP6.16□□□□□ -1.42
RFFL-205ENST00000415395 LINC01554Q52M75 96 aa6.16□□□□□ -1.42
RFFL-205ENST00000415395 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
RFFL-205ENST00000415395 A0A1B0GU33 70 aa6.12□□□□□ -1.43
RFFL-205ENST00000415395 K7ERS5 55 aa6.09□□□□□ -1.43
RFFL-205ENST00000415395 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
RFFL-205ENST00000415395 COX6B2Q6YFQ2 88 aa6.07□□□□□ -1.44
RFFL-205ENST00000415395 H0YAA0 97 aa6.06□□□□□ -1.44
RFFL-205ENST00000415395 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
RFFL-205ENST00000415395 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
RFFL-205ENST00000415395 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
RFFL-205ENST00000415395 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
RFFL-205ENST00000415395 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
RFFL-205ENST00000415395 LPAP08519 4548 aa5.95□□□□□ -1.46
RFFL-205ENST00000415395 LRP2P98164 4655 aa5.94□□□□□ -1.46
RFFL-205ENST00000415395 S4R3F8 94 aa5.86□□□□□ -1.47
RFFL-205ENST00000415395 ROMO1P60602 79 aa5.85□□□□□ -1.47
RFFL-205ENST00000415395 HERC1Q15751 4861 aa5.85□□□□□ -1.47
RFFL-205ENST00000415395 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
RFFL-205ENST00000415395 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
RFFL-205ENST00000415395 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
RFFL-205ENST00000415395 KRTAP3-3Q9BYR6 98 aa5.78□□□□□ -1.48
RFFL-205ENST00000415395 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
RFFL-205ENST00000415395 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
RFFL-205ENST00000415395 A0A0D9SG42 100 aa5.72□□□□□ -1.49
RFFL-205ENST00000415395 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
RFFL-205ENST00000415395 H3BS24 57 aa5.65□□□□□ -1.5
RFFL-205ENST00000415395 M0QZ58 72 aa5.65□□□□□ -1.5
RFFL-205ENST00000415395 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
RFFL-205ENST00000415395 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.51
RFFL-205ENST00000415395 P0C880 135 aa5.64□□□□□ -1.51
RFFL-205ENST00000415395 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
RFFL-205ENST00000415395 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
RFFL-205ENST00000415395 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
RFFL-205ENST00000415395 MUC2Q02817 5179 aa5.53□□□□□ -1.52
RFFL-205ENST00000415395 FLGP20930 4061 aaPredicted RBP5.52□□□□□ -1.53
RFFL-205ENST00000415395 UBR4Q5T4S7 5183 aa5.5□□□□□ -1.53
RFFL-205ENST00000415395 RNF213Q63HN8 5207 aa5.5□□□□□ -1.53
RFFL-205ENST00000415395 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
RFFL-205ENST00000415395 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
RFFL-205ENST00000415395 R4GN34 69 aa5.44□□□□□ -1.54
RFFL-205ENST00000415395 MT1HP80294 61 aa5.4□□□□□ -1.55
RFFL-205ENST00000415395 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
RFFL-205ENST00000415395 M0R2T5 61 aa5.34□□□□□ -1.55
RFFL-205ENST00000415395 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
RFFL-205ENST00000415395 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
RFFL-205ENST00000415395 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
RFFL-205ENST00000415395 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
RFFL-205ENST00000415395 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
RFFL-205ENST00000415395 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
RFFL-205ENST00000415395 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
RFFL-205ENST00000415395 MT2AP02795 61 aa5.18□□□□□ -1.58
RFFL-205ENST00000415395 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
RFFL-205ENST00000415395 MT1FP04733 61 aa5.14□□□□□ -1.59
RFFL-205ENST00000415395 KRTAP10-10P60014 251 aa5.14□□□□□ -1.59
RFFL-205ENST00000415395 LCE2DQ5TA82 110 aaPredicted RBP5.14□□□□□ -1.59
RFFL-205ENST00000415395 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
RFFL-205ENST00000415395 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
RFFL-205ENST00000415395 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
RFFL-205ENST00000415395 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
RFFL-205ENST00000415395 TNP1P09430 55 aa5.03□□□□□ -1.6
RFFL-205ENST00000415395 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
RFFL-205ENST00000415395 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
RFFL-205ENST00000415395 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
RFFL-205ENST00000415395 MT1BP07438 61 aa4.89□□□□□ -1.63
RFFL-205ENST00000415395 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
RFFL-205ENST00000415395 LCE2BO14633 110 aa4.85□□□□□ -1.63
RFFL-205ENST00000415395 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
RFFL-205ENST00000415395 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
RFFL-205ENST00000415395 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
RFFL-205ENST00000415395 MT1XP80297 61 aa4.74□□□□□ -1.65
RFFL-205ENST00000415395 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
RFFL-205ENST00000415395 USH2AO75445 5202 aa4.67□□□□□ -1.66
RFFL-205ENST00000415395 LCE3AQ5TA76 89 aa4.63□□□□□ -1.67
RFFL-205ENST00000415395 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
RFFL-205ENST00000415395 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
RFFL-205ENST00000415395 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
RFFL-205ENST00000415395 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
RFFL-205ENST00000415395 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
RFFL-205ENST00000415395 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
RFFL-205ENST00000415395 INE1O15225 51 aa4.43□□□□□ -1.7
RFFL-205ENST00000415395 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
RFFL-205ENST00000415395 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
RFFL-205ENST00000415395 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
RFFL-205ENST00000415395 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
RFFL-205ENST00000415395 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
RFFL-205ENST00000415395 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
RFFL-205ENST00000415395 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
RFFL-205ENST00000415395 KMT2DO14686 5537 aa4.23□□□□□ -1.73
RFFL-205ENST00000415395 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
RFFL-205ENST00000415395 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
RFFL-205ENST00000415395 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
RFFL-205ENST00000415395 MT1EP04732 61 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 387.2 ms