RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
RFFL-205ENST00000415395 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
RFFL-205ENST00000415395 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
RFFL-205ENST00000415395 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
RFFL-205ENST00000415395 ABCC9O60706 1549 aa21.47■■□□□ 1.03
RFFL-205ENST00000415395 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
RFFL-205ENST00000415395 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
RFFL-205ENST00000415395 NACADO15069 1562 aa21.3■■□□□ 1
RFFL-205ENST00000415395 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
RFFL-205ENST00000415395 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
RFFL-205ENST00000415395 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
RFFL-205ENST00000415395 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
RFFL-205ENST00000415395 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
RFFL-205ENST00000415395 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
RFFL-205ENST00000415395 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
RFFL-205ENST00000415395 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
RFFL-205ENST00000415395 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
RFFL-205ENST00000415395 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
RFFL-205ENST00000415395 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
RFFL-205ENST00000415395 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
RFFL-205ENST00000415395 WIZO95785 1651 aa19.97■□□□□ 0.79
RFFL-205ENST00000415395 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
RFFL-205ENST00000415395 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
RFFL-205ENST00000415395 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
RFFL-205ENST00000415395 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
RFFL-205ENST00000415395 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
RFFL-205ENST00000415395 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
RFFL-205ENST00000415395 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
RFFL-205ENST00000415395 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
RFFL-205ENST00000415395 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
RFFL-205ENST00000415395 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
RFFL-205ENST00000415395 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
RFFL-205ENST00000415395 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
RFFL-205ENST00000415395 CFTRP13569 1480 aa19.16■□□□□ 0.66
RFFL-205ENST00000415395 TRIM41Q8WV44 630 aa19.14■□□□□ 0.66
RFFL-205ENST00000415395 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
RFFL-205ENST00000415395 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
RFFL-205ENST00000415395 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
RFFL-205ENST00000415395 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
RFFL-205ENST00000415395 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
RFFL-205ENST00000415395 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
RFFL-205ENST00000415395 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
RFFL-205ENST00000415395 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
RFFL-205ENST00000415395 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
RFFL-205ENST00000415395 NESP48681 1621 aa18.84■□□□□ 0.61
RFFL-205ENST00000415395 CUX1P39880 1505 aa18.84■□□□□ 0.61
RFFL-205ENST00000415395 EEA1Q15075 1411 aa18.83■□□□□ 0.61
RFFL-205ENST00000415395 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
RFFL-205ENST00000415395 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
RFFL-205ENST00000415395 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
RFFL-205ENST00000415395 SOGA1O94964 1423 aa18.72■□□□□ 0.59
RFFL-205ENST00000415395 KIF21AQ7Z4S6 1674 aa18.71■□□□□ 0.59
RFFL-205ENST00000415395 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
RFFL-205ENST00000415395 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
RFFL-205ENST00000415395 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
RFFL-205ENST00000415395 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
RFFL-205ENST00000415395 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
RFFL-205ENST00000415395 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
RFFL-205ENST00000415395 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
RFFL-205ENST00000415395 KIF27Q86VH2 1401 aa18.58■□□□□ 0.56
RFFL-205ENST00000415395 KIF21BO75037 1637 aa18.58■□□□□ 0.56
RFFL-205ENST00000415395 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
RFFL-205ENST00000415395 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
RFFL-205ENST00000415395 HRCP23327 699 aa18.54■□□□□ 0.56
RFFL-205ENST00000415395 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
RFFL-205ENST00000415395 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
RFFL-205ENST00000415395 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
RFFL-205ENST00000415395 CUX2O14529 1486 aa18.49■□□□□ 0.55
RFFL-205ENST00000415395 WDR62O43379 1518 aa18.49■□□□□ 0.55
RFFL-205ENST00000415395 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
RFFL-205ENST00000415395 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
RFFL-205ENST00000415395 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
RFFL-205ENST00000415395 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
RFFL-205ENST00000415395 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
RFFL-205ENST00000415395 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
RFFL-205ENST00000415395 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
RFFL-205ENST00000415395 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
RFFL-205ENST00000415395 RAPGEF2Q9Y4G8 1499 aa18.37■□□□□ 0.53
RFFL-205ENST00000415395 IGF1RP08069 1367 aa18.37■□□□□ 0.53
RFFL-205ENST00000415395 CUL7Q14999 1698 aa18.35■□□□□ 0.53
RFFL-205ENST00000415395 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
RFFL-205ENST00000415395 IFT140Q96RY7 1462 aa18.34■□□□□ 0.53
RFFL-205ENST00000415395 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
RFFL-205ENST00000415395 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
RFFL-205ENST00000415395 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
RFFL-205ENST00000415395 CEP162Q5TB80 1403 aa18.3■□□□□ 0.52
RFFL-205ENST00000415395 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
RFFL-205ENST00000415395 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
RFFL-205ENST00000415395 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
RFFL-205ENST00000415395 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
RFFL-205ENST00000415395 CLIP1P30622 1438 aa18.17■□□□□ 0.5
RFFL-205ENST00000415395 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
RFFL-205ENST00000415395 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.55e-10■■■■■ 39.2
RFFL-205ENST00000415395 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.5
RFFL-205ENST00000415395 ADAMTS12P58397 1594 aa18.14■□□□□ 0.49
RFFL-205ENST00000415395 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
RFFL-205ENST00000415395 FHAD1B1AJZ9 1412 aa18.12■□□□□ 0.49
RFFL-205ENST00000415395 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
RFFL-205ENST00000415395 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
RFFL-205ENST00000415395 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms