RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 DNAH11Q96DT5 4516 aa3.87□□□□□ -1.79
PBRM1-208ENST00000410007 LORP23490 312 aaPredicted RBP3.86□□□□□ -1.79
PBRM1-208ENST00000410007 VPS13CQ709C8 3753 aa3.85□□□□□ -1.79
PBRM1-208ENST00000410007 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.79
PBRM1-208ENST00000410007 DNAH1Q9P2D7 4330 aa3.82□□□□□ -1.8
PBRM1-208ENST00000410007 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
PBRM1-208ENST00000410007 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
PBRM1-208ENST00000410007 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
PBRM1-208ENST00000410007 MT1HP80294 61 aa3.77□□□□□ -1.81
PBRM1-208ENST00000410007 AKAP9Q99996 3911 aa3.77□□□□□ -1.81
PBRM1-208ENST00000410007 ZNF469Q96JG9 3925 aaPredicted RBP3.76□□□□□ -1.81
PBRM1-208ENST00000410007 KRTAP8-1Q8IUC2 63 aa3.76□□□□□ -1.81
PBRM1-208ENST00000410007 INE1O15225 51 aa3.75□□□□□ -1.81
PBRM1-208ENST00000410007 DYNC1H1Q14204 4646 aaKnown RBP3.75□□□□□ -1.81
PBRM1-208ENST00000410007 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
PBRM1-208ENST00000410007 DNAH17Q9UFH2 4485 aa3.73□□□□□ -1.81
PBRM1-208ENST00000410007 CSMD3Q7Z407 3707 aa3.72□□□□□ -1.81
PBRM1-208ENST00000410007 MT2AP02795 61 aa3.72□□□□□ -1.81
PBRM1-208ENST00000410007 DNAH2Q9P225 4427 aa3.71□□□□□ -1.81
PBRM1-208ENST00000410007 RYR1P21817 5038 aa3.69□□□□□ -1.82
PBRM1-208ENST00000410007 LRP1BQ9NZR2 4599 aa3.69□□□□□ -1.82
PBRM1-208ENST00000410007 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
PBRM1-208ENST00000410007 FAT1Q14517 4588 aa3.67□□□□□ -1.82
PBRM1-208ENST00000410007 SACSQ9NZJ4 4579 aa3.63□□□□□ -1.83
PBRM1-208ENST00000410007 STARD9Q9P2P6 4700 aa3.63□□□□□ -1.83
PBRM1-208ENST00000410007 MT1FP04733 61 aa3.62□□□□□ -1.83
PBRM1-208ENST00000410007 FAT2Q9NYQ8 4349 aa3.61□□□□□ -1.83
PBRM1-208ENST00000410007 DYNC2H1Q8NCM8 4307 aaKnown RBP3.6□□□□□ -1.83
PBRM1-208ENST00000410007 DNAH8Q96JB1 4490 aa3.56□□□□□ -1.84
PBRM1-208ENST00000410007 PRKDCP78527 4128 aaKnown RBP3.54□□□□□ -1.84
PBRM1-208ENST00000410007 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
PBRM1-208ENST00000410007 KIAA1109Q2LD37 5005 aa3.52□□□□□ -1.85
PBRM1-208ENST00000410007 RYR3Q15413 4870 aa3.52□□□□□ -1.85
PBRM1-208ENST00000410007 APOBP04114 4563 aaKnown RBP3.52□□□□□ -1.85
PBRM1-208ENST00000410007 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
PBRM1-208ENST00000410007 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
PBRM1-208ENST00000410007 KRTAP17-1Q9BYP8 105 aa3.5□□□□□ -1.85
PBRM1-208ENST00000410007 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
PBRM1-208ENST00000410007 ANK2Q01484 3957 aa3.5□□□□□ -1.85
PBRM1-208ENST00000410007 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
PBRM1-208ENST00000410007 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.85
PBRM1-208ENST00000410007 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
PBRM1-208ENST00000410007 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
PBRM1-208ENST00000410007 RYR2Q92736 4967 aa3.45□□□□□ -1.86
PBRM1-208ENST00000410007 KRTAP19-1Q8IUB9 90 aa3.43□□□□□ -1.86
PBRM1-208ENST00000410007 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
PBRM1-208ENST00000410007 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
PBRM1-208ENST00000410007 KMT2AQ03164 3969 aa3.4□□□□□ -1.86
PBRM1-208ENST00000410007 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
PBRM1-208ENST00000410007 DNAH6Q9C0G6 4158 aa3.38□□□□□ -1.87
PBRM1-208ENST00000410007 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
PBRM1-208ENST00000410007 LYSTQ99698 3801 aa3.36□□□□□ -1.87
PBRM1-208ENST00000410007 LRP1Q07954 4544 aaKnown RBP3.36□□□□□ -1.87
PBRM1-208ENST00000410007 HERC2O95714 4834 aa3.35□□□□□ -1.87
PBRM1-208ENST00000410007 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
PBRM1-208ENST00000410007 HERC1Q15751 4861 aa3.33□□□□□ -1.88
PBRM1-208ENST00000410007 MT1XP80297 61 aa3.31□□□□□ -1.88
PBRM1-208ENST00000410007 MT1BP07438 61 aa3.31□□□□□ -1.88
PBRM1-208ENST00000410007 DNAH7Q8WXX0 4024 aa3.3□□□□□ -1.88
PBRM1-208ENST00000410007 LCE2CQ5TA81 110 aa3.29□□□□□ -1.88
PBRM1-208ENST00000410007 SPRR2EP22531 72 aa3.29□□□□□ -1.88
PBRM1-208ENST00000410007 SPRR2BP35325 72 aa3.29□□□□□ -1.88
PBRM1-208ENST00000410007 SPRR2AP35326 72 aa3.29□□□□□ -1.88
PBRM1-208ENST00000410007 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
PBRM1-208ENST00000410007 PCLOQ9Y6V0 5065 aa3.26□□□□□ -1.89
PBRM1-208ENST00000410007 HSPG2P98160 4391 aa3.26□□□□□ -1.89
PBRM1-208ENST00000410007 CMYA5Q8N3K9 4069 aa3.24□□□□□ -1.89
PBRM1-208ENST00000410007 PKD1P98161 4303 aa3.24□□□□□ -1.89
PBRM1-208ENST00000410007 LRP2P98164 4655 aa3.19□□□□□ -1.9
PBRM1-208ENST00000410007 SPRR2DP22532 72 aa3.19□□□□□ -1.9
PBRM1-208ENST00000410007 HECTD4Q9Y4D8 3996 aa3.19□□□□□ -1.9
PBRM1-208ENST00000410007 MT1GP13640 62 aa3.18□□□□□ -1.9
PBRM1-208ENST00000410007 LCE2BO14633 110 aa3.18□□□□□ -1.9
PBRM1-208ENST00000410007 HYDINQ4G0P3 5121 aa3.17□□□□□ -1.9
PBRM1-208ENST00000410007 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
PBRM1-208ENST00000410007 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
PBRM1-208ENST00000410007 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
PBRM1-208ENST00000410007 PKHD1L1Q86WI1 4243 aa3.15□□□□□ -1.91
PBRM1-208ENST00000410007 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
PBRM1-208ENST00000410007 FRAS1Q86XX4 4008 aa3.13□□□□□ -1.91
PBRM1-208ENST00000410007 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
PBRM1-208ENST00000410007 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
PBRM1-208ENST00000410007 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
PBRM1-208ENST00000410007 EPPK1P58107 5090 aaKnown RBP3.09□□□□□ -1.91
PBRM1-208ENST00000410007 KMT2CQ8NEZ4 4911 aaKnown RBP3.06□□□□□ -1.92
PBRM1-208ENST00000410007 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
PBRM1-208ENST00000410007 PKHD1P08F94 4074 aa3.05□□□□□ -1.92
PBRM1-208ENST00000410007 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
PBRM1-208ENST00000410007 LCE2DQ5TA82 110 aaPredicted RBP3.04□□□□□ -1.92
PBRM1-208ENST00000410007 ABCA13Q86UQ4 5058 aa3.03□□□□□ -1.92
PBRM1-208ENST00000410007 MUC17Q685J3 4493 aa3.02□□□□□ -1.93
PBRM1-208ENST00000410007 MT1LQ93083 61 aa3.01□□□□□ -1.93
PBRM1-208ENST00000410007 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
PBRM1-208ENST00000410007 LPAP08519 4548 aa3□□□□□ -1.93
PBRM1-208ENST00000410007 MT1EP04732 61 aa3□□□□□ -1.93
PBRM1-208ENST00000410007 FLGP20930 4061 aaPredicted RBP2.96□□□□□ -1.94
PBRM1-208ENST00000410007 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
PBRM1-208ENST00000410007 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
PBRM1-208ENST00000410007 TNXBP22105 4242 aa2.93□□□□□ -1.94
PBRM1-208ENST00000410007 KRTAP4-7Q9BYR0 210 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms