RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
PBRM1-208ENST00000410007 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
PBRM1-208ENST00000410007 SUPT5HO00267 1087 aaKnown RBP15.12■□□□□ 0.01
PBRM1-208ENST00000410007 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
PBRM1-208ENST00000410007 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
PBRM1-208ENST00000410007 APLP2Q06481 763 aa14.39□□□□□ -0.11
PBRM1-208ENST00000410007 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
PBRM1-208ENST00000410007 TRIM41Q8WV44 630 aa14.09□□□□□ -0.15
PBRM1-208ENST00000410007 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.17
PBRM1-208ENST00000410007 RANGAP1P46060 587 aaPredicted RBP13.96□□□□□ -0.18
PBRM1-208ENST00000410007 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
PBRM1-208ENST00000410007 UBTFP17480 764 aaKnown RBP13.91□□□□□ -0.18
PBRM1-208ENST00000410007 ATP1B4Q9UN42 357 aaPredicted RBP13.89□□□□□ -0.19
PBRM1-208ENST00000410007 PCGF6Q9BYE7 350 aa13.87□□□□□ -0.19
PBRM1-208ENST00000410007 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
PBRM1-208ENST00000410007 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
PBRM1-208ENST00000410007 ABCC9O60706 1549 aa13.59□□□□□ -0.23
PBRM1-208ENST00000410007 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
PBRM1-208ENST00000410007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
PBRM1-208ENST00000410007 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
PBRM1-208ENST00000410007 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
PBRM1-208ENST00000410007 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
PBRM1-208ENST00000410007 PPARGC1BQ86YN6 1023 aaKnown RBP13.45□□□□□ -0.26
PBRM1-208ENST00000410007 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
PBRM1-208ENST00000410007 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
PBRM1-208ENST00000410007 ITGAEP38570 1179 aa13.36□□□□□ -0.27
PBRM1-208ENST00000410007 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
PBRM1-208ENST00000410007 NEFLP07196 543 aa13.31□□□□□ -0.28
PBRM1-208ENST00000410007 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
PBRM1-208ENST00000410007 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
PBRM1-208ENST00000410007 POLR3GLQ9BT43 218 aa13.16□□□□□ -0.3
PBRM1-208ENST00000410007 FAM50AQ14320 339 aaKnown RBP13.1□□□□□ -0.31
PBRM1-208ENST00000410007 HRCP23327 699 aa13.1□□□□□ -0.31
PBRM1-208ENST00000410007 FBLN2P98095 1184 aa13.08□□□□□ -0.32
PBRM1-208ENST00000410007 TRIM52Q96A61 297 aa13.02□□□□□ -0.32
PBRM1-208ENST00000410007 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
PBRM1-208ENST00000410007 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
PBRM1-208ENST00000410007 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
PBRM1-208ENST00000410007 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
PBRM1-208ENST00000410007 CNGB1Q14028 1251 aaPredicted RBP12.95□□□□□ -0.34
PBRM1-208ENST00000410007 CCDC180Q9P1Z9 1646 aa12.93□□□□□ -0.34
PBRM1-208ENST00000410007 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
PBRM1-208ENST00000410007 P3H3Q8IVL6 736 aa12.87□□□□□ -0.35
PBRM1-208ENST00000410007 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
PBRM1-208ENST00000410007 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-208ENST00000410007 DIEXFQ68CQ4 756 aaKnown RBP12.83□□□□□ -0.36
PBRM1-208ENST00000410007 ZNF326Q5BKZ1 582 aaKnown RBP12.8□□□□□ -0.36
PBRM1-208ENST00000410007 ARID3CA6NKF2 412 aa12.8□□□□□ -0.36
PBRM1-208ENST00000410007 RB1CC1Q8TDY2 1594 aa12.78□□□□□ -0.36
PBRM1-208ENST00000410007 ZNF777Q9ULD5 760 aaPredicted RBP12.76□□□□□ -0.37
PBRM1-208ENST00000410007 NPM1P06748 294 aaKnown RBP eCLIP12.72□□□□□ -0.37
PBRM1-208ENST00000410007 ANP32CO43423 234 aa12.72□□□□□ -0.37
PBRM1-208ENST00000410007 BCANQ96GW7 911 aa12.68□□□□□ -0.38
PBRM1-208ENST00000410007 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
PBRM1-208ENST00000410007 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
PBRM1-208ENST00000410007 NACADO15069 1562 aa12.65□□□□□ -0.38
PBRM1-208ENST00000410007 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
PBRM1-208ENST00000410007 CHMP7Q8WUX9 453 aaPredicted RBP12.62□□□□□ -0.39
PBRM1-208ENST00000410007 MYT1Q01538 1121 aa12.61□□□□□ -0.39
PBRM1-208ENST00000410007 NEFMP07197 916 aa12.61□□□□□ -0.39
PBRM1-208ENST00000410007 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
PBRM1-208ENST00000410007 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
PBRM1-208ENST00000410007 TONSLQ96HA7 1378 aa12.55□□□□□ -0.4
PBRM1-208ENST00000410007 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
PBRM1-208ENST00000410007 TSPY4P0CV99 314 aa12.54□□□□□ -0.4
PBRM1-208ENST00000410007 TSPY10P0CW01 314 aa12.54□□□□□ -0.4
PBRM1-208ENST00000410007 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
PBRM1-208ENST00000410007 MTUS2Q5JR59 1369 aa12.53□□□□□ -0.4
PBRM1-208ENST00000410007 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
PBRM1-208ENST00000410007 EEA1Q15075 1411 aa12.52□□□□□ -0.41
PBRM1-208ENST00000410007 DCAF1Q9Y4B6 1507 aa12.5□□□□□ -0.41
PBRM1-208ENST00000410007 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
PBRM1-208ENST00000410007 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
PBRM1-208ENST00000410007 CLIP1P30622 1438 aa12.49□□□□□ -0.41
PBRM1-208ENST00000410007 CHIC2Q9UKJ5 165 aa12.48□□□□□ -0.41
PBRM1-208ENST00000410007 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
PBRM1-208ENST00000410007 WRNQ14191 1432 aaPredicted RBP eCLIP12.46□□□□□ -0.41
PBRM1-208ENST00000410007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.421e-6■■■□□ 19.2
PBRM1-208ENST00000410007 GOLGA3Q08378 1498 aa12.42□□□□□ -0.42
PBRM1-208ENST00000410007 PLEKHD1A6NEE1 506 aa12.42□□□□□ -0.42
PBRM1-208ENST00000410007 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
PBRM1-208ENST00000410007 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
PBRM1-208ENST00000410007 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
PBRM1-208ENST00000410007 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
PBRM1-208ENST00000410007 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
PBRM1-208ENST00000410007 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
PBRM1-208ENST00000410007 ERCC6Q03468 1493 aa12.36□□□□□ -0.43
PBRM1-208ENST00000410007 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
PBRM1-208ENST00000410007 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
PBRM1-208ENST00000410007 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
PBRM1-208ENST00000410007 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
PBRM1-208ENST00000410007 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
PBRM1-208ENST00000410007 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
PBRM1-208ENST00000410007 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
PBRM1-208ENST00000410007 CFDP1Q9UEE9 299 aaPredicted RBP12.3□□□□□ -0.44
PBRM1-208ENST00000410007 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
PBRM1-208ENST00000410007 TMC1Q8TDI8 760 aa12.28□□□□□ -0.44
PBRM1-208ENST00000410007 HNRNPUQ00839 825 aaKnown RBP eCLIP12.27□□□□□ -0.44
PBRM1-208ENST00000410007 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
PBRM1-208ENST00000410007 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms