RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 KRTAP1-4P0C5Y4 121 aa1.75□□□□□ -2.13
CUL3-204ENST00000409777 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
CUL3-204ENST00000409777 LINC01554Q52M75 96 aa1.75□□□□□ -2.13
CUL3-204ENST00000409777 ADM2Q7Z4H4 148 aa1.75□□□□□ -2.13
CUL3-204ENST00000409777 RPS29P62273 56 aaKnown RBP1.74□□□□□ -2.13
CUL3-204ENST00000409777 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
CUL3-204ENST00000409777 KIAA1109Q2LD37 5005 aa1.74□□□□□ -2.13
CUL3-204ENST00000409777 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
CUL3-204ENST00000409777 KMT2CQ8NEZ4 4911 aaKnown RBP1.74□□□□□ -2.13
CUL3-204ENST00000409777 RYR2Q92736 4967 aa1.73□□□□□ -2.13
CUL3-204ENST00000409777 A8MUU9 505 aa1.73□□□□□ -2.13
CUL3-204ENST00000409777 FAT2Q9NYQ8 4349 aa1.73□□□□□ -2.13
CUL3-204ENST00000409777 LY6G6CO95867 125 aa1.72□□□□□ -2.13
CUL3-204ENST00000409777 CIRBP-AS1Q8TBR5 109 aa1.72□□□□□ -2.13
CUL3-204ENST00000409777 RETNLBQ9BQ08 111 aa1.72□□□□□ -2.13
CUL3-204ENST00000409777 SPINK6Q6UWN8 80 aa1.72□□□□□ -2.13
CUL3-204ENST00000409777 KMT2AQ03164 3969 aa1.72□□□□□ -2.13
CUL3-204ENST00000409777 H0YAA0 97 aa1.71□□□□□ -2.14
CUL3-204ENST00000409777 LRP1BQ9NZR2 4599 aa1.71□□□□□ -2.14
CUL3-204ENST00000409777 STAB2Q8WWQ8 2551 aa1.71□□□□□ -2.14
CUL3-204ENST00000409777 C20orf166-AS1Q96NR2 134 aa1.71□□□□□ -2.14
CUL3-204ENST00000409777 PKHD1P08F94 4074 aa1.7□□□□□ -2.14
CUL3-204ENST00000409777 NOTCH1P46531 2555 aa1.7□□□□□ -2.14
CUL3-204ENST00000409777 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
CUL3-204ENST00000409777 SPINK1P00995 79 aa1.7□□□□□ -2.14
CUL3-204ENST00000409777 C1orf134Q5TEV5 83 aa1.7□□□□□ -2.14
CUL3-204ENST00000409777 CSAG1Q6PB30 78 aa1.7□□□□□ -2.14
CUL3-204ENST00000409777 RYR1P21817 5038 aa1.69□□□□□ -2.14
CUL3-204ENST00000409777 LINC00304Q8N9R0 145 aa1.69□□□□□ -2.14
CUL3-204ENST00000409777 KRTAP25-1Q3LHN0 102 aa1.69□□□□□ -2.14
CUL3-204ENST00000409777 TYMSOSQ8TAI1 123 aa1.69□□□□□ -2.14
CUL3-204ENST00000409777 APOBP04114 4563 aaKnown RBP1.68□□□□□ -2.14
CUL3-204ENST00000409777 KRTAP10-1P60331 282 aa1.68□□□□□ -2.14
CUL3-204ENST00000409777 H1FX-AS1Q4G0G2 97 aa1.68□□□□□ -2.14
CUL3-204ENST00000409777 VPS13BQ7Z7G8 4022 aa1.67□□□□□ -2.14
CUL3-204ENST00000409777 KRTAP10-4P60372 401 aaPredicted RBP1.66□□□□□ -2.14
CUL3-204ENST00000409777 TNXBP22105 4242 aa1.66□□□□□ -2.14
CUL3-204ENST00000409777 TGP01266 2768 aa1.66□□□□□ -2.14
CUL3-204ENST00000409777 HSPG2P98160 4391 aa1.66□□□□□ -2.14
CUL3-204ENST00000409777 A0A1B0GU33 70 aa1.66□□□□□ -2.14
CUL3-204ENST00000409777 LUZP6Q538Z0 58 aa1.66□□□□□ -2.14
CUL3-204ENST00000409777 MGAM2Q2M2H8 2515 aa1.65□□□□□ -2.15
CUL3-204ENST00000409777 NDUFAF8A1L188 74 aa1.65□□□□□ -2.15
CUL3-204ENST00000409777 ROMO1P60602 79 aa1.65□□□□□ -2.15
CUL3-204ENST00000409777 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
CUL3-204ENST00000409777 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
CUL3-204ENST00000409777 KRTAP10-6P60371 365 aaPredicted RBP1.64□□□□□ -2.15
CUL3-204ENST00000409777 COX6B2Q6YFQ2 88 aa1.64□□□□□ -2.15
CUL3-204ENST00000409777 CAMK2N1Q7Z7J9 78 aa1.64□□□□□ -2.15
CUL3-204ENST00000409777 LCE1AQ5T7P2 110 aa1.62□□□□□ -2.15
CUL3-204ENST00000409777 P0C880 135 aa1.62□□□□□ -2.15
CUL3-204ENST00000409777 LRP1Q07954 4544 aaKnown RBP1.62□□□□□ -2.15
CUL3-204ENST00000409777 DYNC1H1Q14204 4646 aaKnown RBP1.61□□□□□ -2.15
CUL3-204ENST00000409777 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
CUL3-204ENST00000409777 FAT3Q8TDW7 4589 aa1.61□□□□□ -2.15
CUL3-204ENST00000409777 A0A1B0GVY2 172 aa1.61□□□□□ -2.15
CUL3-204ENST00000409777 KRTAP5-9P26371 169 aa1.61□□□□□ -2.15
CUL3-204ENST00000409777 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
CUL3-204ENST00000409777 FAT1Q14517 4588 aa1.61□□□□□ -2.15
CUL3-204ENST00000409777 TPRXLQ17RH7 258 aa1.6□□□□□ -2.15
CUL3-204ENST00000409777 RPL37P61927 97 aaKnown RBP1.59□□□□□ -2.15
CUL3-204ENST00000409777 HERC1Q15751 4861 aa1.58□□□□□ -2.16
CUL3-204ENST00000409777 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
CUL3-204ENST00000409777 K7ERS5 55 aa1.58□□□□□ -2.16
CUL3-204ENST00000409777 C9orf92A6NGG3 77 aa1.57□□□□□ -2.16
CUL3-204ENST00000409777 KRTAP10-8P60410 259 aa1.57□□□□□ -2.16
CUL3-204ENST00000409777 MYCBP2O75592 4640 aa1.56□□□□□ -2.16
CUL3-204ENST00000409777 KRTAP12-1P59990 96 aa1.55□□□□□ -2.16
CUL3-204ENST00000409777 S4R3F8 94 aa1.55□□□□□ -2.16
CUL3-204ENST00000409777 KRTAP12-2P59991 146 aa1.55□□□□□ -2.16
CUL3-204ENST00000409777 FLG2Q5D862 2391 aaPredicted RBP1.54□□□□□ -2.16
CUL3-204ENST00000409777 CRIPTQ9P021 101 aa1.53□□□□□ -2.16
CUL3-204ENST00000409777 FAT4Q6V0I7 4981 aa1.53□□□□□ -2.16
CUL3-204ENST00000409777 M0QZ58 72 aa1.53□□□□□ -2.17
CUL3-204ENST00000409777 MUC2Q02817 5179 aa1.53□□□□□ -2.17
CUL3-204ENST00000409777 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
CUL3-204ENST00000409777 MT3P25713 68 aa1.51□□□□□ -2.17
CUL3-204ENST00000409777 SMR3BP02814 79 aaPredicted RBP1.51□□□□□ -2.17
CUL3-204ENST00000409777 LCE1EQ5T753 118 aa1.51□□□□□ -2.17
CUL3-204ENST00000409777 MT1HL1P0DM35 61 aa1.5□□□□□ -2.17
CUL3-204ENST00000409777 A0A0D9SG42 100 aa1.49□□□□□ -2.17
CUL3-204ENST00000409777 SPINT4Q6UDR6 99 aa1.49□□□□□ -2.17
CUL3-204ENST00000409777 KRTAP4-4Q9BYR3 166 aa1.47□□□□□ -2.17
CUL3-204ENST00000409777 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
CUL3-204ENST00000409777 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
CUL3-204ENST00000409777 MUC17Q685J3 4493 aa1.47□□□□□ -2.17
CUL3-204ENST00000409777 KRTAP10-7P60409 375 aaPredicted RBP1.46□□□□□ -2.18
CUL3-204ENST00000409777 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
CUL3-204ENST00000409777 LPAP08519 4548 aa1.45□□□□□ -2.18
CUL3-204ENST00000409777 Q5VSD8 79 aa1.45□□□□□ -2.18
CUL3-204ENST00000409777 SPRR5A0A1B0GTR4 108 aa1.44□□□□□ -2.18
CUL3-204ENST00000409777 R4GN34 69 aa1.44□□□□□ -2.18
CUL3-204ENST00000409777 PP632Q6XCG6 107 aa1.44□□□□□ -2.18
CUL3-204ENST00000409777 FLGP20930 4061 aaPredicted RBP1.44□□□□□ -2.18
CUL3-204ENST00000409777 HMCN2Q8NDA2 5059 aa1.44□□□□□ -2.18
CUL3-204ENST00000409777 LCE1FQ5T754 118 aa1.43□□□□□ -2.18
CUL3-204ENST00000409777 KRTAP2-2Q9BYT5 123 aa1.43□□□□□ -2.18
CUL3-204ENST00000409777 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
CUL3-204ENST00000409777 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
CUL3-204ENST00000409777 LRP2P98164 4655 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms