RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PLECQ15149 4684 aaKnown RBP7.43□□□□□ -1.22
PCDHA13-202ENST00000409494 DNAH11Q96DT5 4516 aa7.4□□□□□ -1.22
PCDHA13-202ENST00000409494 DNAH5Q8TE73 4624 aa7.38□□□□□ -1.23
PCDHA13-202ENST00000409494 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
PCDHA13-202ENST00000409494 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
PCDHA13-202ENST00000409494 VPS13DQ5THJ4 4388 aa7.31□□□□□ -1.24
PCDHA13-202ENST00000409494 DNAH17Q9UFH2 4485 aa7.3□□□□□ -1.24
PCDHA13-202ENST00000409494 DNHD1Q96M86 4753 aa7.27□□□□□ -1.25
PCDHA13-202ENST00000409494 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
PCDHA13-202ENST00000409494 DNAH2Q9P225 4427 aa7.14□□□□□ -1.27
PCDHA13-202ENST00000409494 STARD9Q9P2P6 4700 aa7.13□□□□□ -1.27
PCDHA13-202ENST00000409494 DYNC1H1Q14204 4646 aaKnown RBP7.11□□□□□ -1.27
PCDHA13-202ENST00000409494 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
PCDHA13-202ENST00000409494 DNAH8Q96JB1 4490 aa7.1□□□□□ -1.27
PCDHA13-202ENST00000409494 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
PCDHA13-202ENST00000409494 MT1HP80294 61 aa7.1□□□□□ -1.27
PCDHA13-202ENST00000409494 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
PCDHA13-202ENST00000409494 LRP1BQ9NZR2 4599 aa7.04□□□□□ -1.28
PCDHA13-202ENST00000409494 FAT1Q14517 4588 aa7.02□□□□□ -1.29
PCDHA13-202ENST00000409494 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
PCDHA13-202ENST00000409494 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
PCDHA13-202ENST00000409494 MT2AP02795 61 aa6.97□□□□□ -1.29
PCDHA13-202ENST00000409494 SACSQ9NZJ4 4579 aa6.93□□□□□ -1.3
PCDHA13-202ENST00000409494 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
PCDHA13-202ENST00000409494 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
PCDHA13-202ENST00000409494 INE1O15225 51 aa6.92□□□□□ -1.3
PCDHA13-202ENST00000409494 PRKDCP78527 4128 aaKnown RBP6.91□□□□□ -1.3
PCDHA13-202ENST00000409494 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.3
PCDHA13-202ENST00000409494 ANK2Q01484 3957 aa6.9□□□□□ -1.31
PCDHA13-202ENST00000409494 RYR1P21817 5038 aa6.88□□□□□ -1.31
PCDHA13-202ENST00000409494 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
PCDHA13-202ENST00000409494 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
PCDHA13-202ENST00000409494 MT1FP04733 61 aa6.77□□□□□ -1.33
PCDHA13-202ENST00000409494 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
PCDHA13-202ENST00000409494 DNAH6Q9C0G6 4158 aa6.74□□□□□ -1.33
PCDHA13-202ENST00000409494 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.33
PCDHA13-202ENST00000409494 CMYA5Q8N3K9 4069 aa6.69□□□□□ -1.34
PCDHA13-202ENST00000409494 RYR2Q92736 4967 aa6.68□□□□□ -1.34
PCDHA13-202ENST00000409494 LYSTQ99698 3801 aa6.68□□□□□ -1.34
PCDHA13-202ENST00000409494 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
PCDHA13-202ENST00000409494 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
PCDHA13-202ENST00000409494 CRCT1Q9UGL9 99 aa6.66□□□□□ -1.34
PCDHA13-202ENST00000409494 RYR3Q15413 4870 aa6.65□□□□□ -1.35
PCDHA13-202ENST00000409494 HECTD4Q9Y4D8 3996 aa6.64□□□□□ -1.35
PCDHA13-202ENST00000409494 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
PCDHA13-202ENST00000409494 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
PCDHA13-202ENST00000409494 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
PCDHA13-202ENST00000409494 DNAH7Q8WXX0 4024 aa6.55□□□□□ -1.36
PCDHA13-202ENST00000409494 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
PCDHA13-202ENST00000409494 FAT3Q8TDW7 4589 aa6.49□□□□□ -1.37
PCDHA13-202ENST00000409494 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
PCDHA13-202ENST00000409494 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
PCDHA13-202ENST00000409494 HERC1Q15751 4861 aa6.45□□□□□ -1.38
PCDHA13-202ENST00000409494 HSPG2P98160 4391 aa6.42□□□□□ -1.38
PCDHA13-202ENST00000409494 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.39
PCDHA13-202ENST00000409494 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
PCDHA13-202ENST00000409494 HERC2O95714 4834 aa6.36□□□□□ -1.39
PCDHA13-202ENST00000409494 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
PCDHA13-202ENST00000409494 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
PCDHA13-202ENST00000409494 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
PCDHA13-202ENST00000409494 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
PCDHA13-202ENST00000409494 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
PCDHA13-202ENST00000409494 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
PCDHA13-202ENST00000409494 MT1BP07438 61 aa6.24□□□□□ -1.41
PCDHA13-202ENST00000409494 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
PCDHA13-202ENST00000409494 PKHD1P08F94 4074 aa6.22□□□□□ -1.41
PCDHA13-202ENST00000409494 LRP2P98164 4655 aa6.21□□□□□ -1.41
PCDHA13-202ENST00000409494 MT1XP80297 61 aa6.2□□□□□ -1.42
PCDHA13-202ENST00000409494 PKD1P98161 4303 aa6.14□□□□□ -1.43
PCDHA13-202ENST00000409494 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
PCDHA13-202ENST00000409494 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
PCDHA13-202ENST00000409494 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
PCDHA13-202ENST00000409494 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
PCDHA13-202ENST00000409494 SPRR2EP22531 72 aa6.05□□□□□ -1.44
PCDHA13-202ENST00000409494 SPRR2BP35325 72 aa6.05□□□□□ -1.44
PCDHA13-202ENST00000409494 SPRR2AP35326 72 aa6.05□□□□□ -1.44
PCDHA13-202ENST00000409494 MT1GP13640 62 aa6□□□□□ -1.45
PCDHA13-202ENST00000409494 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
PCDHA13-202ENST00000409494 LPAP08519 4548 aa5.91□□□□□ -1.46
PCDHA13-202ENST00000409494 TNXBP22105 4242 aa5.9□□□□□ -1.46
PCDHA13-202ENST00000409494 LCE2BO14633 110 aa5.9□□□□□ -1.46
PCDHA13-202ENST00000409494 SPRR2DP22532 72 aa5.88□□□□□ -1.47
PCDHA13-202ENST00000409494 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
PCDHA13-202ENST00000409494 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
PCDHA13-202ENST00000409494 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
PCDHA13-202ENST00000409494 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
PCDHA13-202ENST00000409494 KRTAP12-4P60329 112 aa5.77□□□□□ -1.48
PCDHA13-202ENST00000409494 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
PCDHA13-202ENST00000409494 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
PCDHA13-202ENST00000409494 ABCA13Q86UQ4 5058 aa5.76□□□□□ -1.49
PCDHA13-202ENST00000409494 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
PCDHA13-202ENST00000409494 FLGP20930 4061 aaPredicted RBP5.71□□□□□ -1.5
PCDHA13-202ENST00000409494 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
PCDHA13-202ENST00000409494 EPPK1P58107 5090 aaKnown RBP5.67□□□□□ -1.5
PCDHA13-202ENST00000409494 MT1LQ93083 61 aa5.64□□□□□ -1.51
PCDHA13-202ENST00000409494 MT1EP04732 61 aa5.63□□□□□ -1.51
PCDHA13-202ENST00000409494 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
PCDHA13-202ENST00000409494 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
PCDHA13-202ENST00000409494 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
PCDHA13-202ENST00000409494 MT1MQ8N339 61 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms