RNA–Protein interactions for RNA: ENST00000409168.7

SHISA6-202, Transcript of shisa family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA6, Length 7,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6-202ENST00000409168 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
SHISA6-202ENST00000409168 FBN1P35555 2871 aaKnown RBP6.67□□□□□ -1.34
SHISA6-202ENST00000409168 ANK3Q12955 4377 aaKnown RBP6.6□□□□□ -1.35
SHISA6-202ENST00000409168 OTOGQ6ZRI0 2925 aa6.55□□□□□ -1.36
SHISA6-202ENST00000409168 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
SHISA6-202ENST00000409168 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
SHISA6-202ENST00000409168 SPRR2EP22531 72 aa6.35□□□□□ -1.39
SHISA6-202ENST00000409168 SPRR2BP35325 72 aa6.35□□□□□ -1.39
SHISA6-202ENST00000409168 SPRR2AP35326 72 aa6.35□□□□□ -1.39
SHISA6-202ENST00000409168 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.39
SHISA6-202ENST00000409168 HUWE1Q7Z6Z7 4374 aaKnown RBP6.26□□□□□ -1.41
SHISA6-202ENST00000409168 FRAS1Q86XX4 4008 aa6.18□□□□□ -1.42
SHISA6-202ENST00000409168 MT1HP80294 61 aa6.18□□□□□ -1.42
SHISA6-202ENST00000409168 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
SHISA6-202ENST00000409168 LYSTQ99698 3801 aa6.12□□□□□ -1.43
SHISA6-202ENST00000409168 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
SHISA6-202ENST00000409168 SPRR2DP22532 72 aa6.1□□□□□ -1.43
SHISA6-202ENST00000409168 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
SHISA6-202ENST00000409168 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
SHISA6-202ENST00000409168 ANK2Q01484 3957 aa6.07□□□□□ -1.44
SHISA6-202ENST00000409168 MT1GP13640 62 aa6.04□□□□□ -1.44
SHISA6-202ENST00000409168 ALMS1Q8TCU4 4167 aa6.03□□□□□ -1.44
SHISA6-202ENST00000409168 CMYA5Q8N3K9 4069 aa6.02□□□□□ -1.45
SHISA6-202ENST00000409168 MT2AP02795 61 aa6□□□□□ -1.45
SHISA6-202ENST00000409168 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
SHISA6-202ENST00000409168 KMT2AQ03164 3969 aa5.95□□□□□ -1.46
SHISA6-202ENST00000409168 MT1FP04733 61 aa5.93□□□□□ -1.46
SHISA6-202ENST00000409168 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
SHISA6-202ENST00000409168 LCE2BO14633 110 aa5.9□□□□□ -1.46
SHISA6-202ENST00000409168 DNAH3Q8TD57 4116 aa5.87□□□□□ -1.47
SHISA6-202ENST00000409168 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
SHISA6-202ENST00000409168 DNAH7Q8WXX0 4024 aa5.83□□□□□ -1.48
SHISA6-202ENST00000409168 DNAH9Q9NYC9 4486 aa5.81□□□□□ -1.48
SHISA6-202ENST00000409168 DNAH2Q9P225 4427 aa5.79□□□□□ -1.48
SHISA6-202ENST00000409168 VPS13BQ7Z7G8 4022 aa5.75□□□□□ -1.49
SHISA6-202ENST00000409168 MT4P47944 62 aa5.73□□□□□ -1.49
SHISA6-202ENST00000409168 LCE3EQ5T5B0 92 aa5.7□□□□□ -1.5
SHISA6-202ENST00000409168 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
SHISA6-202ENST00000409168 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
SHISA6-202ENST00000409168 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
SHISA6-202ENST00000409168 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
SHISA6-202ENST00000409168 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.5
SHISA6-202ENST00000409168 LCE3DQ9BYE3 92 aa5.65□□□□□ -1.51
SHISA6-202ENST00000409168 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
SHISA6-202ENST00000409168 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
SHISA6-202ENST00000409168 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
SHISA6-202ENST00000409168 LCE1BQ5T7P3 118 aa5.63□□□□□ -1.51
SHISA6-202ENST00000409168 DNAH8Q96JB1 4490 aa5.6□□□□□ -1.51
SHISA6-202ENST00000409168 DNAH11Q96DT5 4516 aa5.59□□□□□ -1.51
SHISA6-202ENST00000409168 PRKDCP78527 4128 aaKnown RBP5.58□□□□□ -1.52
SHISA6-202ENST00000409168 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
SHISA6-202ENST00000409168 FAT1Q14517 4588 aa5.51□□□□□ -1.53
SHISA6-202ENST00000409168 DNAH17Q9UFH2 4485 aa5.5□□□□□ -1.53
SHISA6-202ENST00000409168 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
SHISA6-202ENST00000409168 VPS13DQ5THJ4 4388 aa5.48□□□□□ -1.53
SHISA6-202ENST00000409168 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
SHISA6-202ENST00000409168 DNAH5Q8TE73 4624 aa5.42□□□□□ -1.54
SHISA6-202ENST00000409168 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
SHISA6-202ENST00000409168 PRM1P04553 51 aa5.37□□□□□ -1.55
SHISA6-202ENST00000409168 FAT2Q9NYQ8 4349 aa5.35□□□□□ -1.55
SHISA6-202ENST00000409168 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.55
SHISA6-202ENST00000409168 MT1XP80297 61 aa5.29□□□□□ -1.56
SHISA6-202ENST00000409168 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
SHISA6-202ENST00000409168 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
SHISA6-202ENST00000409168 PKHD1P08F94 4074 aa5.24□□□□□ -1.57
SHISA6-202ENST00000409168 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
SHISA6-202ENST00000409168 SACSQ9NZJ4 4579 aa5.15□□□□□ -1.59
SHISA6-202ENST00000409168 APOBP04114 4563 aaKnown RBP5.12□□□□□ -1.59
SHISA6-202ENST00000409168 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
SHISA6-202ENST00000409168 LCE1CQ5T751 118 aa5.09□□□□□ -1.6
SHISA6-202ENST00000409168 LCE1EQ5T753 118 aa5.09□□□□□ -1.6
SHISA6-202ENST00000409168 LCE1FQ5T754 118 aa5.09□□□□□ -1.6
SHISA6-202ENST00000409168 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.6
SHISA6-202ENST00000409168 MT1BP07438 61 aa5.06□□□□□ -1.6
SHISA6-202ENST00000409168 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
SHISA6-202ENST00000409168 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
SHISA6-202ENST00000409168 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
SHISA6-202ENST00000409168 FAT3Q8TDW7 4589 aa5.03□□□□□ -1.6
SHISA6-202ENST00000409168 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
SHISA6-202ENST00000409168 LRP1Q07954 4544 aaKnown RBP5□□□□□ -1.61
SHISA6-202ENST00000409168 MT3P25713 68 aa5□□□□□ -1.61
SHISA6-202ENST00000409168 DYNC1H1Q14204 4646 aaKnown RBP4.99□□□□□ -1.61
SHISA6-202ENST00000409168 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
SHISA6-202ENST00000409168 PKD1P98161 4303 aa4.96□□□□□ -1.62
SHISA6-202ENST00000409168 LPAP08519 4548 aa4.93□□□□□ -1.62
SHISA6-202ENST00000409168 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
SHISA6-202ENST00000409168 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
SHISA6-202ENST00000409168 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
SHISA6-202ENST00000409168 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.62
SHISA6-202ENST00000409168 MT1LQ93083 61 aa4.89□□□□□ -1.63
SHISA6-202ENST00000409168 PKHD1L1Q86WI1 4243 aa4.87□□□□□ -1.63
SHISA6-202ENST00000409168 RYR1P21817 5038 aa4.87□□□□□ -1.63
SHISA6-202ENST00000409168 DNHD1Q96M86 4753 aa4.86□□□□□ -1.63
SHISA6-202ENST00000409168 TNXBP22105 4242 aa4.86□□□□□ -1.63
SHISA6-202ENST00000409168 HSPG2P98160 4391 aa4.85□□□□□ -1.63
SHISA6-202ENST00000409168 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
SHISA6-202ENST00000409168 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
SHISA6-202ENST00000409168 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
SHISA6-202ENST00000409168 MT1EP04732 61 aa4.79□□□□□ -1.64
SHISA6-202ENST00000409168 HYDINQ4G0P3 5121 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms