RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
KDM3A-202ENST00000409064 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
KDM3A-202ENST00000409064 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
KDM3A-202ENST00000409064 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
KDM3A-202ENST00000409064 KRTAP13-4Q3LI77 160 aa4.83□□□□□ -1.64
KDM3A-202ENST00000409064 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
KDM3A-202ENST00000409064 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
KDM3A-202ENST00000409064 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
KDM3A-202ENST00000409064 DNAH2Q9P225 4427 aa4.8□□□□□ -1.64
KDM3A-202ENST00000409064 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
KDM3A-202ENST00000409064 FRAS1Q86XX4 4008 aa4.79□□□□□ -1.64
KDM3A-202ENST00000409064 HECTD4Q9Y4D8 3996 aa4.79□□□□□ -1.64
KDM3A-202ENST00000409064 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
KDM3A-202ENST00000409064 KMT2AQ03164 3969 aa4.77□□□□□ -1.65
KDM3A-202ENST00000409064 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
KDM3A-202ENST00000409064 KRTAP3-2Q9BYR7 98 aa4.76□□□□□ -1.65
KDM3A-202ENST00000409064 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
KDM3A-202ENST00000409064 LRP1BQ9NZR2 4599 aa4.72□□□□□ -1.65
KDM3A-202ENST00000409064 PRKDCP78527 4128 aaKnown RBP4.72□□□□□ -1.65
KDM3A-202ENST00000409064 RYR1P21817 5038 aa4.69□□□□□ -1.66
KDM3A-202ENST00000409064 DNAH6Q9C0G6 4158 aa4.65□□□□□ -1.67
KDM3A-202ENST00000409064 VPS13BQ7Z7G8 4022 aa4.64□□□□□ -1.67
KDM3A-202ENST00000409064 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
KDM3A-202ENST00000409064 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
KDM3A-202ENST00000409064 FAT1Q14517 4588 aa4.58□□□□□ -1.68
KDM3A-202ENST00000409064 SACSQ9NZJ4 4579 aa4.57□□□□□ -1.68
KDM3A-202ENST00000409064 DYNC1H1Q14204 4646 aaKnown RBP4.55□□□□□ -1.68
KDM3A-202ENST00000409064 RYR3Q15413 4870 aa4.5□□□□□ -1.69
KDM3A-202ENST00000409064 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
KDM3A-202ENST00000409064 PKD1P98161 4303 aa4.45□□□□□ -1.7
KDM3A-202ENST00000409064 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
KDM3A-202ENST00000409064 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
KDM3A-202ENST00000409064 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
KDM3A-202ENST00000409064 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
KDM3A-202ENST00000409064 MT1HP80294 61 aa4.39□□□□□ -1.71
KDM3A-202ENST00000409064 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
KDM3A-202ENST00000409064 HERC2O95714 4834 aa4.36□□□□□ -1.71
KDM3A-202ENST00000409064 PKHD1P08F94 4074 aa4.36□□□□□ -1.71
KDM3A-202ENST00000409064 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
KDM3A-202ENST00000409064 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
KDM3A-202ENST00000409064 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
KDM3A-202ENST00000409064 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
KDM3A-202ENST00000409064 PKHD1L1Q86WI1 4243 aa4.31□□□□□ -1.72
KDM3A-202ENST00000409064 MYCBP2O75592 4640 aa4.3□□□□□ -1.72
KDM3A-202ENST00000409064 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
KDM3A-202ENST00000409064 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
KDM3A-202ENST00000409064 MT2AP02795 61 aa4.28□□□□□ -1.72
KDM3A-202ENST00000409064 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
KDM3A-202ENST00000409064 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
KDM3A-202ENST00000409064 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
KDM3A-202ENST00000409064 MT1FP04733 61 aa4.2□□□□□ -1.74
KDM3A-202ENST00000409064 RYR2Q92736 4967 aa4.2□□□□□ -1.74
KDM3A-202ENST00000409064 TNXBP22105 4242 aa4.15□□□□□ -1.74
KDM3A-202ENST00000409064 LCE3AQ5TA76 89 aa4.15□□□□□ -1.74
KDM3A-202ENST00000409064 HSPG2P98160 4391 aa4.15□□□□□ -1.74
KDM3A-202ENST00000409064 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
KDM3A-202ENST00000409064 LRP2P98164 4655 aa4.11□□□□□ -1.75
KDM3A-202ENST00000409064 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.75
KDM3A-202ENST00000409064 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.76
KDM3A-202ENST00000409064 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
KDM3A-202ENST00000409064 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
KDM3A-202ENST00000409064 HERC1Q15751 4861 aa4.01□□□□□ -1.77
KDM3A-202ENST00000409064 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
KDM3A-202ENST00000409064 LPAP08519 4548 aa3.97□□□□□ -1.77
KDM3A-202ENST00000409064 INE1O15225 51 aa3.94□□□□□ -1.78
KDM3A-202ENST00000409064 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
KDM3A-202ENST00000409064 ABCA13Q86UQ4 5058 aa3.91□□□□□ -1.78
KDM3A-202ENST00000409064 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
KDM3A-202ENST00000409064 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
KDM3A-202ENST00000409064 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
KDM3A-202ENST00000409064 KRTAP9-8Q9BYQ0 159 aa3.88□□□□□ -1.79
KDM3A-202ENST00000409064 SPRR2EP22531 72 aa3.87□□□□□ -1.79
KDM3A-202ENST00000409064 SPRR2BP35325 72 aa3.87□□□□□ -1.79
KDM3A-202ENST00000409064 SPRR2AP35326 72 aa3.87□□□□□ -1.79
KDM3A-202ENST00000409064 LCE2CQ5TA81 110 aa3.87□□□□□ -1.79
KDM3A-202ENST00000409064 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
KDM3A-202ENST00000409064 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
KDM3A-202ENST00000409064 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
KDM3A-202ENST00000409064 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
KDM3A-202ENST00000409064 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
KDM3A-202ENST00000409064 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
KDM3A-202ENST00000409064 MT1BP07438 61 aa3.77□□□□□ -1.81
KDM3A-202ENST00000409064 MUC17Q685J3 4493 aa3.76□□□□□ -1.81
KDM3A-202ENST00000409064 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
KDM3A-202ENST00000409064 SPRR2DP22532 72 aa3.74□□□□□ -1.81
KDM3A-202ENST00000409064 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
KDM3A-202ENST00000409064 MT1XP80297 61 aa3.72□□□□□ -1.81
KDM3A-202ENST00000409064 KRTAP4-8A0A0G2JLE6 195 aa3.7□□□□□ -1.82
KDM3A-202ENST00000409064 KRTAP4-8Q9BYQ9 185 aa3.7□□□□□ -1.82
KDM3A-202ENST00000409064 LCE2BO14633 110 aa3.69□□□□□ -1.82
KDM3A-202ENST00000409064 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
KDM3A-202ENST00000409064 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
KDM3A-202ENST00000409064 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
KDM3A-202ENST00000409064 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
KDM3A-202ENST00000409064 MUC2Q02817 5179 aa3.61□□□□□ -1.83
KDM3A-202ENST00000409064 MT1GP13640 62 aa3.57□□□□□ -1.84
KDM3A-202ENST00000409064 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
KDM3A-202ENST00000409064 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
KDM3A-202ENST00000409064 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
KDM3A-202ENST00000409064 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms