RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 PRKDCP78527 4128 aaKnown RBP1.34□□□□□ -2.2
SNORD88.1-201ENST00000408684 NOTCH1P46531 2555 aa1.34□□□□□ -2.2
SNORD88.1-201ENST00000408684 DNAH6Q9C0G6 4158 aa1.33□□□□□ -2.2
SNORD88.1-201ENST00000408684 MEGF8Q7Z7M0 2845 aa1.33□□□□□ -2.2
SNORD88.1-201ENST00000408684 FBN1P35555 2871 aaKnown RBP1.33□□□□□ -2.2
SNORD88.1-201ENST00000408684 HECTD4Q9Y4D8 3996 aa1.33□□□□□ -2.2
SNORD88.1-201ENST00000408684 MGAM2Q2M2H8 2515 aa1.32□□□□□ -2.2
SNORD88.1-201ENST00000408684 PRO2289Q9P1D8 64 aa1.32□□□□□ -2.2
SNORD88.1-201ENST00000408684 SACSQ9NZJ4 4579 aa1.32□□□□□ -2.2
SNORD88.1-201ENST00000408684 DNAH7Q8WXX0 4024 aa1.32□□□□□ -2.2
SNORD88.1-201ENST00000408684 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
SNORD88.1-201ENST00000408684 FRAS1Q86XX4 4008 aa1.31□□□□□ -2.2
SNORD88.1-201ENST00000408684 DNAH11Q96DT5 4516 aa1.31□□□□□ -2.2
SNORD88.1-201ENST00000408684 CSMD3Q7Z407 3707 aa1.3□□□□□ -2.2
SNORD88.1-201ENST00000408684 SPRR5A0A1B0GTR4 108 aa1.3□□□□□ -2.2
SNORD88.1-201ENST00000408684 LCE2BO14633 110 aa1.3□□□□□ -2.2
SNORD88.1-201ENST00000408684 LRP1BQ9NZR2 4599 aa1.3□□□□□ -2.2
SNORD88.1-201ENST00000408684 DNAH5Q8TE73 4624 aa1.29□□□□□ -2.2
SNORD88.1-201ENST00000408684 PKHD1L1Q86WI1 4243 aa1.29□□□□□ -2.2
SNORD88.1-201ENST00000408684 STARD9Q9P2P6 4700 aa1.28□□□□□ -2.2
SNORD88.1-201ENST00000408684 COL7A1Q02388 2944 aa1.28□□□□□ -2.2
SNORD88.1-201ENST00000408684 FBN3Q75N90 2809 aa1.27□□□□□ -2.21
SNORD88.1-201ENST00000408684 DMBT1Q9UGM3 2413 aaPredicted RBP1.27□□□□□ -2.21
SNORD88.1-201ENST00000408684 VPS13BQ7Z7G8 4022 aa1.26□□□□□ -2.21
SNORD88.1-201ENST00000408684 MT1HL1P0DM35 61 aa1.26□□□□□ -2.21
SNORD88.1-201ENST00000408684 PKD1P98161 4303 aa1.26□□□□□ -2.21
SNORD88.1-201ENST00000408684 KMT2AQ03164 3969 aa1.26□□□□□ -2.21
SNORD88.1-201ENST00000408684 LCE2AQ5TA79 106 aaPredicted RBP1.25□□□□□ -2.21
SNORD88.1-201ENST00000408684 PKHD1P08F94 4074 aa1.25□□□□□ -2.21
SNORD88.1-201ENST00000408684 APOBP04114 4563 aaKnown RBP1.25□□□□□ -2.21
SNORD88.1-201ENST00000408684 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
SNORD88.1-201ENST00000408684 KRTAP4-8Q9BYQ9 185 aa1.23□□□□□ -2.21
SNORD88.1-201ENST00000408684 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
SNORD88.1-201ENST00000408684 LRP1Q07954 4544 aaKnown RBP1.22□□□□□ -2.21
SNORD88.1-201ENST00000408684 J3QL48 77 aa1.22□□□□□ -2.21
SNORD88.1-201ENST00000408684 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.21□□□□□ -2.22
SNORD88.1-201ENST00000408684 LORP23490 312 aaPredicted RBP1.21□□□□□ -2.22
SNORD88.1-201ENST00000408684 TNXBP22105 4242 aa1.21□□□□□ -2.22
SNORD88.1-201ENST00000408684 DYNC1H1Q14204 4646 aaKnown RBP1.2□□□□□ -2.22
SNORD88.1-201ENST00000408684 KRTAP19-4Q3LI73 84 aa1.2□□□□□ -2.22
SNORD88.1-201ENST00000408684 SPRR2GQ9BYE4 73 aa1.2□□□□□ -2.22
SNORD88.1-201ENST00000408684 KRTAP9-2Q9BYQ4 174 aa1.2□□□□□ -2.22
SNORD88.1-201ENST00000408684 FAT1Q14517 4588 aa1.2□□□□□ -2.22
SNORD88.1-201ENST00000408684 HSPG2P98160 4391 aa1.2□□□□□ -2.22
SNORD88.1-201ENST00000408684 KRTAP9-6A0A140TA67 174 aa1.19□□□□□ -2.22
SNORD88.1-201ENST00000408684 KRTAP8-1Q8IUC2 63 aa1.19□□□□□ -2.22
SNORD88.1-201ENST00000408684 KRTAP17-1Q9BYP8 105 aa1.18□□□□□ -2.22
SNORD88.1-201ENST00000408684 DNHD1Q96M86 4753 aa1.17□□□□□ -2.22
SNORD88.1-201ENST00000408684 MYCBP2O75592 4640 aa1.17□□□□□ -2.22
SNORD88.1-201ENST00000408684 KRTAP19-2Q3LHN2 52 aa1.16□□□□□ -2.22
SNORD88.1-201ENST00000408684 KRTAP4-8A0A0G2JLE6 195 aa1.15□□□□□ -2.23
SNORD88.1-201ENST00000408684 M0R2T5 61 aa1.15□□□□□ -2.23
SNORD88.1-201ENST00000408684 LCE3AQ5TA76 89 aa1.15□□□□□ -2.23
SNORD88.1-201ENST00000408684 HYDINQ4G0P3 5121 aa1.15□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP12-3P60328 96 aa1.14□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP9-9Q9BYP9 154 aa1.14□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP9-4Q9BYQ2 154 aa1.14□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP10-12P60413 245 aa1.13□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP4-12Q9BQ66 201 aa1.13□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP4-1Q9BYQ7 146 aa1.13□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
SNORD88.1-201ENST00000408684 LCE2CQ5TA81 110 aa1.12□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP10-10P60014 251 aa1.11□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP19-1Q8IUB9 90 aa1.11□□□□□ -2.23
SNORD88.1-201ENST00000408684 KRTAP4-7Q9BYR0 210 aa1.11□□□□□ -2.23
SNORD88.1-201ENST00000408684 MUC17Q685J3 4493 aa1.1□□□□□ -2.23
SNORD88.1-201ENST00000408684 RYR2Q92736 4967 aa1.09□□□□□ -2.23
SNORD88.1-201ENST00000408684 LCE3BQ5TA77 95 aa1.09□□□□□ -2.23
SNORD88.1-201ENST00000408684 LCE3CQ5T5A8 94 aa1.08□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP4-2Q9BYR5 136 aa1.08□□□□□ -2.24
SNORD88.1-201ENST00000408684 RYR1P21817 5038 aa1.08□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP10-5P60370 271 aa1.07□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP4-9Q9BYQ8 210 aa1.07□□□□□ -2.24
SNORD88.1-201ENST00000408684 HERC1Q15751 4861 aa1.06□□□□□ -2.24
SNORD88.1-201ENST00000408684 LRP2P98164 4655 aa1.06□□□□□ -2.24
SNORD88.1-201ENST00000408684 MT2AP02795 61 aa1.06□□□□□ -2.24
SNORD88.1-201ENST00000408684 LCE1DQ5T752 114 aa1.06□□□□□ -2.24
SNORD88.1-201ENST00000408684 LPAP08519 4548 aa1.06□□□□□ -2.24
SNORD88.1-201ENST00000408684 KMT2CQ8NEZ4 4911 aaKnown RBP1.05□□□□□ -2.24
SNORD88.1-201ENST00000408684 MT1HP80294 61 aa1.05□□□□□ -2.24
SNORD88.1-201ENST00000408684 MT1XP80297 61 aa1.05□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP5-3Q6L8H2 238 aa1.05□□□□□ -2.24
SNORD88.1-201ENST00000408684 FLGP20930 4061 aaPredicted RBP1.05□□□□□ -2.24
SNORD88.1-201ENST00000408684 MT1FP04733 61 aa1.04□□□□□ -2.24
SNORD88.1-201ENST00000408684 MT1BP07438 61 aa1.04□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP9-8Q9BYQ0 159 aa1.04□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP4-5Q9BYR2 181 aa1.04□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP2-3P0C7H8 128 aa1.03□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP2-4Q9BYR9 128 aa1.03□□□□□ -2.24
SNORD88.1-201ENST00000408684 KRTAP2-1Q9BYU5 128 aa1.03□□□□□ -2.24
SNORD88.1-201ENST00000408684 RYR3Q15413 4870 aa1.02□□□□□ -2.25
SNORD88.1-201ENST00000408684 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
SNORD88.1-201ENST00000408684 KRTAP10-7P60409 375 aaPredicted RBP1□□□□□ -2.25
SNORD88.1-201ENST00000408684 KRTAP4-11Q9BYQ6 195 aa1□□□□□ -2.25
SNORD88.1-201ENST00000408684 KRTAP9-3Q9BYQ3 159 aa0.99□□□□□ -2.25
SNORD88.1-201ENST00000408684 KIAA1109Q2LD37 5005 aa0.99□□□□□ -2.25
SNORD88.1-201ENST00000408684 BIRC6Q9NR09 4857 aa0.98□□□□□ -2.25
SNORD88.1-201ENST00000408684 MT1EP04732 61 aa0.98□□□□□ -2.25
SNORD88.1-201ENST00000408684 MT1LQ93083 61 aa0.97□□□□□ -2.25
SNORD88.1-201ENST00000408684 ABCA13Q86UQ4 5058 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms