RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 KRTAP3-2Q9BYR7 98 aa3.26□□□□□ -1.89
HDAC9-203ENST00000406072 KRTAP17-1Q9BYP8 105 aa3.24□□□□□ -1.89
HDAC9-203ENST00000406072 SRRM2Q9UQ35 2752 aaKnown RBP3.23□□□□□ -1.89
HDAC9-203ENST00000406072 R4GN34 69 aa3.23□□□□□ -1.89
HDAC9-203ENST00000406072 APOBP04114 4563 aaKnown RBP3.23□□□□□ -1.89
HDAC9-203ENST00000406072 P0C880 135 aa3.22□□□□□ -1.89
HDAC9-203ENST00000406072 KRTAP10-2P60368 255 aa3.22□□□□□ -1.89
HDAC9-203ENST00000406072 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.89
HDAC9-203ENST00000406072 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.89
HDAC9-203ENST00000406072 KRTAP10-1P60331 282 aa3.21□□□□□ -1.9
HDAC9-203ENST00000406072 KRTAP10-4P60372 401 aaPredicted RBP3.21□□□□□ -1.9
HDAC9-203ENST00000406072 M0QZ58 72 aa3.19□□□□□ -1.9
HDAC9-203ENST00000406072 LRP1BQ9NZR2 4599 aa3.19□□□□□ -1.9
HDAC9-203ENST00000406072 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
HDAC9-203ENST00000406072 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
HDAC9-203ENST00000406072 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
HDAC9-203ENST00000406072 FAT3Q8TDW7 4589 aa3.17□□□□□ -1.9
HDAC9-203ENST00000406072 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
HDAC9-203ENST00000406072 RYR3Q15413 4870 aa3.15□□□□□ -1.91
HDAC9-203ENST00000406072 FAT1Q14517 4588 aa3.14□□□□□ -1.91
HDAC9-203ENST00000406072 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
HDAC9-203ENST00000406072 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
HDAC9-203ENST00000406072 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
HDAC9-203ENST00000406072 HSPG2P98160 4391 aa3.12□□□□□ -1.91
HDAC9-203ENST00000406072 RYR1P21817 5038 aa3.12□□□□□ -1.91
HDAC9-203ENST00000406072 TNXBP22105 4242 aa3.11□□□□□ -1.91
HDAC9-203ENST00000406072 KRTAP10-8P60410 259 aa3.09□□□□□ -1.91
HDAC9-203ENST00000406072 TENM2Q9NT68 2774 aa3.08□□□□□ -1.92
HDAC9-203ENST00000406072 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
HDAC9-203ENST00000406072 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.92
HDAC9-203ENST00000406072 HERC2O95714 4834 aa3.02□□□□□ -1.93
HDAC9-203ENST00000406072 Q5VSD8 79 aa3.02□□□□□ -1.93
HDAC9-203ENST00000406072 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
HDAC9-203ENST00000406072 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
HDAC9-203ENST00000406072 MUC17Q685J3 4493 aa3□□□□□ -1.93
HDAC9-203ENST00000406072 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
HDAC9-203ENST00000406072 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
HDAC9-203ENST00000406072 TNP1P09430 55 aa2.98□□□□□ -1.93
HDAC9-203ENST00000406072 KRTAP3-1Q9BYR8 98 aa2.97□□□□□ -1.93
HDAC9-203ENST00000406072 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
HDAC9-203ENST00000406072 KRTAP12-1P59990 96 aa2.95□□□□□ -1.94
HDAC9-203ENST00000406072 M0R2T5 61 aa2.94□□□□□ -1.94
HDAC9-203ENST00000406072 KRTAP10-6P60371 365 aaPredicted RBP2.92□□□□□ -1.94
HDAC9-203ENST00000406072 MYCBP2O75592 4640 aa2.91□□□□□ -1.94
HDAC9-203ENST00000406072 XP32Q5T750 250 aa2.89□□□□□ -1.95
HDAC9-203ENST00000406072 ABCA13Q86UQ4 5058 aa2.89□□□□□ -1.95
HDAC9-203ENST00000406072 LCE2AQ5TA79 106 aaPredicted RBP2.89□□□□□ -1.95
HDAC9-203ENST00000406072 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
HDAC9-203ENST00000406072 KRTAP4-5Q9BYR2 181 aa2.86□□□□□ -1.95
HDAC9-203ENST00000406072 LCE2BO14633 110 aa2.85□□□□□ -1.95
HDAC9-203ENST00000406072 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
HDAC9-203ENST00000406072 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
HDAC9-203ENST00000406072 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
HDAC9-203ENST00000406072 LCE2CQ5TA81 110 aa2.79□□□□□ -1.96
HDAC9-203ENST00000406072 KRTAP4-8Q9BYQ9 185 aa2.77□□□□□ -1.97
HDAC9-203ENST00000406072 INE1O15225 51 aa2.75□□□□□ -1.97
HDAC9-203ENST00000406072 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
HDAC9-203ENST00000406072 HERC1Q15751 4861 aa2.74□□□□□ -1.97
HDAC9-203ENST00000406072 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
HDAC9-203ENST00000406072 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.64□□□□□ -1.99
HDAC9-203ENST00000406072 LPAP08519 4548 aa2.63□□□□□ -1.99
HDAC9-203ENST00000406072 LORP23490 312 aaPredicted RBP2.62□□□□□ -1.99
HDAC9-203ENST00000406072 KRTAP4-1Q9BYQ7 146 aa2.62□□□□□ -1.99
HDAC9-203ENST00000406072 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
HDAC9-203ENST00000406072 KRTAP9-2Q9BYQ4 174 aa2.6□□□□□ -1.99
HDAC9-203ENST00000406072 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
HDAC9-203ENST00000406072 LRP2P98164 4655 aa2.59□□□□□ -1.99
HDAC9-203ENST00000406072 KRTAP10-10P60014 251 aa2.58□□□□□ -2
HDAC9-203ENST00000406072 KRTAP4-8A0A0G2JLE6 195 aa2.54□□□□□ -2
HDAC9-203ENST00000406072 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
HDAC9-203ENST00000406072 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
HDAC9-203ENST00000406072 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
HDAC9-203ENST00000406072 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
HDAC9-203ENST00000406072 MT1HP80294 61 aa2.5□□□□□ -2.01
HDAC9-203ENST00000406072 RNF213Q63HN8 5207 aa2.5□□□□□ -2.01
HDAC9-203ENST00000406072 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
HDAC9-203ENST00000406072 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
HDAC9-203ENST00000406072 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
HDAC9-203ENST00000406072 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
HDAC9-203ENST00000406072 KRTAP9-8Q9BYQ0 159 aa2.43□□□□□ -2.02
HDAC9-203ENST00000406072 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
HDAC9-203ENST00000406072 KRTAP4-9Q9BYQ8 210 aa2.41□□□□□ -2.02
HDAC9-203ENST00000406072 UBR4Q5T4S7 5183 aa2.41□□□□□ -2.02
HDAC9-203ENST00000406072 KRTAP10-12P60413 245 aa2.4□□□□□ -2.02
HDAC9-203ENST00000406072 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.02
HDAC9-203ENST00000406072 MT2AP02795 61 aa2.39□□□□□ -2.03
HDAC9-203ENST00000406072 KRTAP19-8Q3LI54 63 aa2.39□□□□□ -2.03
HDAC9-203ENST00000406072 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
HDAC9-203ENST00000406072 MT1FP04733 61 aa2.35□□□□□ -2.03
HDAC9-203ENST00000406072 KRTAP19-1Q8IUB9 90 aa2.34□□□□□ -2.03
HDAC9-203ENST00000406072 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
HDAC9-203ENST00000406072 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.04
HDAC9-203ENST00000406072 KRTAP19-4Q3LI73 84 aa2.33□□□□□ -2.04
HDAC9-203ENST00000406072 MUC2Q02817 5179 aa2.31□□□□□ -2.04
HDAC9-203ENST00000406072 MT1BP07438 61 aa2.27□□□□□ -2.05
HDAC9-203ENST00000406072 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
HDAC9-203ENST00000406072 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
HDAC9-203ENST00000406072 LCE1DQ5T752 114 aa2.24□□□□□ -2.05
HDAC9-203ENST00000406072 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
HDAC9-203ENST00000406072 MT1XP80297 61 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 228.5 ms