RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 HYDINQ4G0P3 5121 aa7.1□□□□□ -1.27
R3HDM2-204ENST00000402412 SACSQ9NZJ4 4579 aa7.08□□□□□ -1.28
R3HDM2-204ENST00000402412 DNAH5Q8TE73 4624 aa7.06□□□□□ -1.28
R3HDM2-204ENST00000402412 TNP1P09430 55 aa7.05□□□□□ -1.28
R3HDM2-204ENST00000402412 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
R3HDM2-204ENST00000402412 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
R3HDM2-204ENST00000402412 FRAS1Q86XX4 4008 aa6.99□□□□□ -1.29
R3HDM2-204ENST00000402412 RYR2Q92736 4967 aa6.98□□□□□ -1.29
R3HDM2-204ENST00000402412 LRP1BQ9NZR2 4599 aa6.98□□□□□ -1.29
R3HDM2-204ENST00000402412 DYNC1H1Q14204 4646 aaKnown RBP6.98□□□□□ -1.29
R3HDM2-204ENST00000402412 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
R3HDM2-204ENST00000402412 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
R3HDM2-204ENST00000402412 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
R3HDM2-204ENST00000402412 PKD1P98161 4303 aa6.92□□□□□ -1.3
R3HDM2-204ENST00000402412 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
R3HDM2-204ENST00000402412 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
R3HDM2-204ENST00000402412 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.32
R3HDM2-204ENST00000402412 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
R3HDM2-204ENST00000402412 FAT1Q14517 4588 aa6.81□□□□□ -1.32
R3HDM2-204ENST00000402412 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
R3HDM2-204ENST00000402412 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
R3HDM2-204ENST00000402412 APOBP04114 4563 aaKnown RBP6.79□□□□□ -1.32
R3HDM2-204ENST00000402412 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
R3HDM2-204ENST00000402412 RYR3Q15413 4870 aa6.69□□□□□ -1.34
R3HDM2-204ENST00000402412 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
R3HDM2-204ENST00000402412 RYR1P21817 5038 aa6.68□□□□□ -1.34
R3HDM2-204ENST00000402412 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.35
R3HDM2-204ENST00000402412 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
R3HDM2-204ENST00000402412 KRTAP12-1P59990 96 aa6.63□□□□□ -1.35
R3HDM2-204ENST00000402412 HSPG2P98160 4391 aa6.61□□□□□ -1.35
R3HDM2-204ENST00000402412 KRTAP4-5Q9BYR2 181 aa6.6□□□□□ -1.35
R3HDM2-204ENST00000402412 KRTAP17-1Q9BYP8 105 aa6.59□□□□□ -1.35
R3HDM2-204ENST00000402412 KRTAP10-6P60371 365 aaPredicted RBP6.54□□□□□ -1.36
R3HDM2-204ENST00000402412 EPPK1P58107 5090 aaKnown RBP6.5□□□□□ -1.37
R3HDM2-204ENST00000402412 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
R3HDM2-204ENST00000402412 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
R3HDM2-204ENST00000402412 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.39
R3HDM2-204ENST00000402412 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
R3HDM2-204ENST00000402412 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
R3HDM2-204ENST00000402412 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
R3HDM2-204ENST00000402412 TNXBP22105 4242 aa6.36□□□□□ -1.39
R3HDM2-204ENST00000402412 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
R3HDM2-204ENST00000402412 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
R3HDM2-204ENST00000402412 HERC2O95714 4834 aa6.28□□□□□ -1.4
R3HDM2-204ENST00000402412 ABCA13Q86UQ4 5058 aa6.22□□□□□ -1.41
R3HDM2-204ENST00000402412 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
R3HDM2-204ENST00000402412 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
R3HDM2-204ENST00000402412 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
R3HDM2-204ENST00000402412 INE1O15225 51 aa6.09□□□□□ -1.43
R3HDM2-204ENST00000402412 LRP2P98164 4655 aa6.04□□□□□ -1.44
R3HDM2-204ENST00000402412 LPAP08519 4548 aa5.99□□□□□ -1.45
R3HDM2-204ENST00000402412 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
R3HDM2-204ENST00000402412 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
R3HDM2-204ENST00000402412 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
R3HDM2-204ENST00000402412 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
R3HDM2-204ENST00000402412 HERC1Q15751 4861 aa5.88□□□□□ -1.47
R3HDM2-204ENST00000402412 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
R3HDM2-204ENST00000402412 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
R3HDM2-204ENST00000402412 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
R3HDM2-204ENST00000402412 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
R3HDM2-204ENST00000402412 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
R3HDM2-204ENST00000402412 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
R3HDM2-204ENST00000402412 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
R3HDM2-204ENST00000402412 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
R3HDM2-204ENST00000402412 MT1HP80294 61 aa5.6□□□□□ -1.51
R3HDM2-204ENST00000402412 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
R3HDM2-204ENST00000402412 RNF213Q63HN8 5207 aa5.58□□□□□ -1.52
R3HDM2-204ENST00000402412 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
R3HDM2-204ENST00000402412 MUC2Q02817 5179 aa5.56□□□□□ -1.52
R3HDM2-204ENST00000402412 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
R3HDM2-204ENST00000402412 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
R3HDM2-204ENST00000402412 MT2AP02795 61 aa5.49□□□□□ -1.53
R3HDM2-204ENST00000402412 MT1FP04733 61 aa5.46□□□□□ -1.54
R3HDM2-204ENST00000402412 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
R3HDM2-204ENST00000402412 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
R3HDM2-204ENST00000402412 SPRR2GQ9BYE4 73 aa5.34□□□□□ -1.55
R3HDM2-204ENST00000402412 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
R3HDM2-204ENST00000402412 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
R3HDM2-204ENST00000402412 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
R3HDM2-204ENST00000402412 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
R3HDM2-204ENST00000402412 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
R3HDM2-204ENST00000402412 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
R3HDM2-204ENST00000402412 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
R3HDM2-204ENST00000402412 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
R3HDM2-204ENST00000402412 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
R3HDM2-204ENST00000402412 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
R3HDM2-204ENST00000402412 MT1BP07438 61 aa5.07□□□□□ -1.6
R3HDM2-204ENST00000402412 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
R3HDM2-204ENST00000402412 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
R3HDM2-204ENST00000402412 LCE2BO14633 110 aa4.99□□□□□ -1.61
R3HDM2-204ENST00000402412 MT1XP80297 61 aa4.98□□□□□ -1.61
R3HDM2-204ENST00000402412 FCGBPQ9Y6R7 5405 aaPredicted RBP4.94□□□□□ -1.62
R3HDM2-204ENST00000402412 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
R3HDM2-204ENST00000402412 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
R3HDM2-204ENST00000402412 MT1GP13640 62 aa4.9□□□□□ -1.62
R3HDM2-204ENST00000402412 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
R3HDM2-204ENST00000402412 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
R3HDM2-204ENST00000402412 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
R3HDM2-204ENST00000402412 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
R3HDM2-204ENST00000402412 USH2AO75445 5202 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms