RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ALMS1Q8TCU4 4167 aa5.94□□□□□ -1.46
VAPA-202ENST00000400000 ZNF469Q96JG9 3925 aaPredicted RBP5.91□□□□□ -1.46
VAPA-202ENST00000400000 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
VAPA-202ENST00000400000 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
VAPA-202ENST00000400000 INE1O15225 51 aa5.81□□□□□ -1.48
VAPA-202ENST00000400000 DNAH9Q9NYC9 4486 aa5.71□□□□□ -1.49
VAPA-202ENST00000400000 DNAH1Q9P2D7 4330 aa5.65□□□□□ -1.5
VAPA-202ENST00000400000 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
VAPA-202ENST00000400000 DNAH10Q8IVF4 4471 aa5.6□□□□□ -1.51
VAPA-202ENST00000400000 MT1HP80294 61 aa5.57□□□□□ -1.52
VAPA-202ENST00000400000 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
VAPA-202ENST00000400000 DNAH2Q9P225 4427 aa5.55□□□□□ -1.52
VAPA-202ENST00000400000 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
VAPA-202ENST00000400000 ANK2Q01484 3957 aa5.48□□□□□ -1.53
VAPA-202ENST00000400000 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
VAPA-202ENST00000400000 PLECQ15149 4684 aaKnown RBP5.45□□□□□ -1.54
VAPA-202ENST00000400000 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
VAPA-202ENST00000400000 VPS13BQ7Z7G8 4022 aa5.43□□□□□ -1.54
VAPA-202ENST00000400000 MT2AP02795 61 aa5.4□□□□□ -1.55
VAPA-202ENST00000400000 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
VAPA-202ENST00000400000 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
VAPA-202ENST00000400000 DNAH11Q96DT5 4516 aa5.39□□□□□ -1.55
VAPA-202ENST00000400000 DNAH3Q8TD57 4116 aa5.38□□□□□ -1.55
VAPA-202ENST00000400000 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
VAPA-202ENST00000400000 FAT2Q9NYQ8 4349 aa5.36□□□□□ -1.55
VAPA-202ENST00000400000 MT1FP04733 61 aa5.34□□□□□ -1.55
VAPA-202ENST00000400000 DNAH8Q96JB1 4490 aa5.33□□□□□ -1.56
VAPA-202ENST00000400000 LYSTQ99698 3801 aa5.32□□□□□ -1.56
VAPA-202ENST00000400000 STARD9Q9P2P6 4700 aa5.3□□□□□ -1.56
VAPA-202ENST00000400000 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
VAPA-202ENST00000400000 SPRR2EP22531 72 aa5.28□□□□□ -1.56
VAPA-202ENST00000400000 SPRR2BP35325 72 aa5.28□□□□□ -1.56
VAPA-202ENST00000400000 SPRR2AP35326 72 aa5.28□□□□□ -1.56
VAPA-202ENST00000400000 DNAH17Q9UFH2 4485 aa5.25□□□□□ -1.57
VAPA-202ENST00000400000 FAT1Q14517 4588 aa5.22□□□□□ -1.57
VAPA-202ENST00000400000 PRKDCP78527 4128 aaKnown RBP5.21□□□□□ -1.58
VAPA-202ENST00000400000 VPS13DQ5THJ4 4388 aa5.21□□□□□ -1.58
VAPA-202ENST00000400000 CMYA5Q8N3K9 4069 aa5.2□□□□□ -1.58
VAPA-202ENST00000400000 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
VAPA-202ENST00000400000 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
VAPA-202ENST00000400000 SACSQ9NZJ4 4579 aa5.16□□□□□ -1.58
VAPA-202ENST00000400000 SPRR2GQ9BYE4 73 aa5.15□□□□□ -1.58
VAPA-202ENST00000400000 DYNC2H1Q8NCM8 4307 aaKnown RBP5.15□□□□□ -1.59
VAPA-202ENST00000400000 DNAH7Q8WXX0 4024 aa5.14□□□□□ -1.59
VAPA-202ENST00000400000 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
VAPA-202ENST00000400000 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
VAPA-202ENST00000400000 DYNC1H1Q14204 4646 aaKnown RBP5.11□□□□□ -1.59
VAPA-202ENST00000400000 SPRR2DP22532 72 aa5.08□□□□□ -1.6
VAPA-202ENST00000400000 MT1GP13640 62 aa5.05□□□□□ -1.6
VAPA-202ENST00000400000 RYR1P21817 5038 aa5.02□□□□□ -1.61
VAPA-202ENST00000400000 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
VAPA-202ENST00000400000 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
VAPA-202ENST00000400000 LCE2BO14633 110 aa4.95□□□□□ -1.62
VAPA-202ENST00000400000 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
VAPA-202ENST00000400000 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
VAPA-202ENST00000400000 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
VAPA-202ENST00000400000 LPAP08519 4548 aa4.9□□□□□ -1.63
VAPA-202ENST00000400000 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
VAPA-202ENST00000400000 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
VAPA-202ENST00000400000 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
VAPA-202ENST00000400000 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
VAPA-202ENST00000400000 LRP1Q07954 4544 aaKnown RBP4.8□□□□□ -1.64
VAPA-202ENST00000400000 MT1XP80297 61 aa4.8□□□□□ -1.64
VAPA-202ENST00000400000 HSPG2P98160 4391 aa4.74□□□□□ -1.65
VAPA-202ENST00000400000 RYR3Q15413 4870 aa4.73□□□□□ -1.65
VAPA-202ENST00000400000 MT4P47944 62 aa4.7□□□□□ -1.66
VAPA-202ENST00000400000 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
VAPA-202ENST00000400000 MT1BP07438 61 aa4.68□□□□□ -1.66
VAPA-202ENST00000400000 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
VAPA-202ENST00000400000 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
VAPA-202ENST00000400000 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
VAPA-202ENST00000400000 PKD1P98161 4303 aa4.67□□□□□ -1.66
VAPA-202ENST00000400000 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
VAPA-202ENST00000400000 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
VAPA-202ENST00000400000 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
VAPA-202ENST00000400000 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
VAPA-202ENST00000400000 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
VAPA-202ENST00000400000 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
VAPA-202ENST00000400000 LOC100996750A0A140TA64 210 aa4.5□□□□□ -1.69
VAPA-202ENST00000400000 HYDINQ4G0P3 5121 aa4.48□□□□□ -1.69
VAPA-202ENST00000400000 LRP2P98164 4655 aa4.47□□□□□ -1.69
VAPA-202ENST00000400000 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
VAPA-202ENST00000400000 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
VAPA-202ENST00000400000 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
VAPA-202ENST00000400000 TNXBP22105 4242 aa4.45□□□□□ -1.7
VAPA-202ENST00000400000 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
VAPA-202ENST00000400000 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
VAPA-202ENST00000400000 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
VAPA-202ENST00000400000 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
VAPA-202ENST00000400000 MT1LQ93083 61 aa4.35□□□□□ -1.71
VAPA-202ENST00000400000 PRM1P04553 51 aa4.33□□□□□ -1.72
VAPA-202ENST00000400000 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
VAPA-202ENST00000400000 MT1EP04732 61 aa4.31□□□□□ -1.72
VAPA-202ENST00000400000 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
VAPA-202ENST00000400000 HERC2O95714 4834 aa4.26□□□□□ -1.73
VAPA-202ENST00000400000 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
VAPA-202ENST00000400000 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
VAPA-202ENST00000400000 MT1MQ8N339 61 aa4.23□□□□□ -1.73
VAPA-202ENST00000400000 RYR2Q92736 4967 aa4.22□□□□□ -1.73
VAPA-202ENST00000400000 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms