RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
HLCS-202ENST00000399120 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
HLCS-202ENST00000399120 VPS13CQ709C8 3753 aa4.47□□□□□ -1.69
HLCS-202ENST00000399120 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
HLCS-202ENST00000399120 AKAP9Q99996 3911 aa4.45□□□□□ -1.7
HLCS-202ENST00000399120 ZNF469Q96JG9 3925 aaPredicted RBP4.45□□□□□ -1.7
HLCS-202ENST00000399120 MT1HP80294 61 aa4.45□□□□□ -1.7
HLCS-202ENST00000399120 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
HLCS-202ENST00000399120 CUBNO60494 3623 aa4.42□□□□□ -1.7
HLCS-202ENST00000399120 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
HLCS-202ENST00000399120 MT2AP02795 61 aa4.39□□□□□ -1.71
HLCS-202ENST00000399120 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
HLCS-202ENST00000399120 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
HLCS-202ENST00000399120 DNAH9Q9NYC9 4486 aa4.34□□□□□ -1.71
HLCS-202ENST00000399120 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
HLCS-202ENST00000399120 MT1FP04733 61 aa4.27□□□□□ -1.73
HLCS-202ENST00000399120 SPRR2EP22531 72 aa4.26□□□□□ -1.73
HLCS-202ENST00000399120 SPRR2BP35325 72 aa4.26□□□□□ -1.73
HLCS-202ENST00000399120 SPRR2AP35326 72 aa4.26□□□□□ -1.73
HLCS-202ENST00000399120 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
HLCS-202ENST00000399120 PLECQ15149 4684 aaKnown RBP4.2□□□□□ -1.74
HLCS-202ENST00000399120 VPS13DQ5THJ4 4388 aa4.2□□□□□ -1.74
HLCS-202ENST00000399120 DNAH1Q9P2D7 4330 aa4.19□□□□□ -1.74
HLCS-202ENST00000399120 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
HLCS-202ENST00000399120 DNAH2Q9P225 4427 aa4.16□□□□□ -1.74
HLCS-202ENST00000399120 DNAH17Q9UFH2 4485 aa4.16□□□□□ -1.74
HLCS-202ENST00000399120 DNHD1Q96M86 4753 aa4.12□□□□□ -1.75
HLCS-202ENST00000399120 SPRR2DP22532 72 aa4.12□□□□□ -1.75
HLCS-202ENST00000399120 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
HLCS-202ENST00000399120 ANK2Q01484 3957 aa4.12□□□□□ -1.75
HLCS-202ENST00000399120 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
HLCS-202ENST00000399120 DNAH10Q8IVF4 4471 aa4.1□□□□□ -1.75
HLCS-202ENST00000399120 MT1GP13640 62 aa4.09□□□□□ -1.75
HLCS-202ENST00000399120 LCE2BO14633 110 aa4.09□□□□□ -1.76
HLCS-202ENST00000399120 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
HLCS-202ENST00000399120 DNAH11Q96DT5 4516 aa4.07□□□□□ -1.76
HLCS-202ENST00000399120 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
HLCS-202ENST00000399120 CSMD3Q7Z407 3707 aa4.02□□□□□ -1.77
HLCS-202ENST00000399120 DYNC2H1Q8NCM8 4307 aaKnown RBP4.02□□□□□ -1.77
HLCS-202ENST00000399120 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
HLCS-202ENST00000399120 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
HLCS-202ENST00000399120 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
HLCS-202ENST00000399120 DYNC1H1Q14204 4646 aaKnown RBP3.99□□□□□ -1.77
HLCS-202ENST00000399120 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
HLCS-202ENST00000399120 FAT1Q14517 4588 aa3.96□□□□□ -1.78
HLCS-202ENST00000399120 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.78
HLCS-202ENST00000399120 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
HLCS-202ENST00000399120 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
HLCS-202ENST00000399120 MT1XP80297 61 aa3.93□□□□□ -1.78
HLCS-202ENST00000399120 SACSQ9NZJ4 4579 aa3.92□□□□□ -1.78
HLCS-202ENST00000399120 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
HLCS-202ENST00000399120 FAT2Q9NYQ8 4349 aa3.9□□□□□ -1.79
HLCS-202ENST00000399120 KMT2AQ03164 3969 aa3.88□□□□□ -1.79
HLCS-202ENST00000399120 LCE2CQ5TA81 110 aa3.85□□□□□ -1.79
HLCS-202ENST00000399120 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.79
HLCS-202ENST00000399120 LYSTQ99698 3801 aa3.83□□□□□ -1.8
HLCS-202ENST00000399120 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
HLCS-202ENST00000399120 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
HLCS-202ENST00000399120 HECTD4Q9Y4D8 3996 aa3.81□□□□□ -1.8
HLCS-202ENST00000399120 MT1BP07438 61 aa3.81□□□□□ -1.8
HLCS-202ENST00000399120 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
HLCS-202ENST00000399120 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
HLCS-202ENST00000399120 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
HLCS-202ENST00000399120 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.8
HLCS-202ENST00000399120 RYR1P21817 5038 aa3.74□□□□□ -1.81
HLCS-202ENST00000399120 RYR2Q92736 4967 aa3.74□□□□□ -1.81
HLCS-202ENST00000399120 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
HLCS-202ENST00000399120 APOBP04114 4563 aaKnown RBP3.73□□□□□ -1.81
HLCS-202ENST00000399120 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
HLCS-202ENST00000399120 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
HLCS-202ENST00000399120 PRM1P04553 51 aa3.7□□□□□ -1.82
HLCS-202ENST00000399120 KRTAP17-1Q9BYP8 105 aa3.7□□□□□ -1.82
HLCS-202ENST00000399120 FRAS1Q86XX4 4008 aa3.69□□□□□ -1.82
HLCS-202ENST00000399120 MT1LQ93083 61 aa3.69□□□□□ -1.82
HLCS-202ENST00000399120 MT3P25713 68 aa3.68□□□□□ -1.82
HLCS-202ENST00000399120 HYDINQ4G0P3 5121 aa3.68□□□□□ -1.82
HLCS-202ENST00000399120 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
HLCS-202ENST00000399120 RYR3Q15413 4870 aa3.67□□□□□ -1.82
HLCS-202ENST00000399120 MT4P47944 62 aa3.65□□□□□ -1.82
HLCS-202ENST00000399120 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
HLCS-202ENST00000399120 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
HLCS-202ENST00000399120 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
HLCS-202ENST00000399120 PKD1P98161 4303 aa3.62□□□□□ -1.83
HLCS-202ENST00000399120 BIRC6Q9NR09 4857 aa3.61□□□□□ -1.83
HLCS-202ENST00000399120 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
HLCS-202ENST00000399120 MT1EP04732 61 aa3.59□□□□□ -1.84
HLCS-202ENST00000399120 MYCBP2O75592 4640 aa3.56□□□□□ -1.84
HLCS-202ENST00000399120 HSPG2P98160 4391 aa3.56□□□□□ -1.84
HLCS-202ENST00000399120 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
HLCS-202ENST00000399120 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
HLCS-202ENST00000399120 MT1MQ8N339 61 aa3.52□□□□□ -1.85
HLCS-202ENST00000399120 PKHD1L1Q86WI1 4243 aa3.51□□□□□ -1.85
HLCS-202ENST00000399120 HERC2O95714 4834 aa3.5□□□□□ -1.85
HLCS-202ENST00000399120 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.85
HLCS-202ENST00000399120 HERC1Q15751 4861 aa3.45□□□□□ -1.86
HLCS-202ENST00000399120 TNXBP22105 4242 aa3.43□□□□□ -1.86
HLCS-202ENST00000399120 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
HLCS-202ENST00000399120 LRP2P98164 4655 aa3.4□□□□□ -1.86
HLCS-202ENST00000399120 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.86
HLCS-202ENST00000399120 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms