RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 ALMS1Q8TCU4 4167 aa8.12□□□□□ -1.11
KDM2A-202ENST00000398645 KRTAP8-1Q8IUC2 63 aa8.09□□□□□ -1.11
KDM2A-202ENST00000398645 OTOGQ6ZRI0 2925 aa8.08□□□□□ -1.12
KDM2A-202ENST00000398645 KRTAP10-4P60372 401 aaPredicted RBP7.96□□□□□ -1.13
KDM2A-202ENST00000398645 KRTAP23-1A1A580 65 aa7.8□□□□□ -1.16
KDM2A-202ENST00000398645 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
KDM2A-202ENST00000398645 DNAH10Q8IVF4 4471 aa7.77□□□□□ -1.17
KDM2A-202ENST00000398645 DNAH2Q9P225 4427 aa7.77□□□□□ -1.17
KDM2A-202ENST00000398645 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
KDM2A-202ENST00000398645 KRTAP4-1Q9BYQ7 146 aa7.73□□□□□ -1.17
KDM2A-202ENST00000398645 DNAH9Q9NYC9 4486 aa7.68□□□□□ -1.18
KDM2A-202ENST00000398645 FRAS1Q86XX4 4008 aa7.67□□□□□ -1.18
KDM2A-202ENST00000398645 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
KDM2A-202ENST00000398645 DNAH8Q96JB1 4490 aa7.62□□□□□ -1.19
KDM2A-202ENST00000398645 ANK2Q01484 3957 aa7.61□□□□□ -1.19
KDM2A-202ENST00000398645 MT1HP80294 61 aa7.58□□□□□ -1.2
KDM2A-202ENST00000398645 SPRR2FQ96RM1 72 aa7.56□□□□□ -1.2
KDM2A-202ENST00000398645 DNAH3Q8TD57 4116 aa7.54□□□□□ -1.2
KDM2A-202ENST00000398645 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
KDM2A-202ENST00000398645 LCE3CQ5T5A8 94 aa7.42□□□□□ -1.22
KDM2A-202ENST00000398645 MT2AP02795 61 aa7.42□□□□□ -1.22
KDM2A-202ENST00000398645 DNAH5Q8TE73 4624 aa7.41□□□□□ -1.22
KDM2A-202ENST00000398645 PLECQ15149 4684 aaKnown RBP7.38□□□□□ -1.23
KDM2A-202ENST00000398645 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
KDM2A-202ENST00000398645 DNAH11Q96DT5 4516 aa7.36□□□□□ -1.23
KDM2A-202ENST00000398645 MT1FP04733 61 aa7.35□□□□□ -1.23
KDM2A-202ENST00000398645 KMT2AQ03164 3969 aa7.31□□□□□ -1.24
KDM2A-202ENST00000398645 VPS13BQ7Z7G8 4022 aa7.28□□□□□ -1.24
KDM2A-202ENST00000398645 FAT2Q9NYQ8 4349 aa7.24□□□□□ -1.25
KDM2A-202ENST00000398645 DNAH17Q9UFH2 4485 aa7.22□□□□□ -1.25
KDM2A-202ENST00000398645 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.26
KDM2A-202ENST00000398645 CMYA5Q8N3K9 4069 aa7.2□□□□□ -1.26
KDM2A-202ENST00000398645 STARD9Q9P2P6 4700 aa7.14□□□□□ -1.27
KDM2A-202ENST00000398645 FAT1Q14517 4588 aa7.13□□□□□ -1.27
KDM2A-202ENST00000398645 MT1GP13640 62 aa7.12□□□□□ -1.27
KDM2A-202ENST00000398645 DNAH7Q8WXX0 4024 aa7.12□□□□□ -1.27
KDM2A-202ENST00000398645 SPRR2EP22531 72 aa7.11□□□□□ -1.27
KDM2A-202ENST00000398645 SPRR2BP35325 72 aa7.11□□□□□ -1.27
KDM2A-202ENST00000398645 SPRR2AP35326 72 aa7.11□□□□□ -1.27
KDM2A-202ENST00000398645 VPS13DQ5THJ4 4388 aa7.11□□□□□ -1.27
KDM2A-202ENST00000398645 LYSTQ99698 3801 aa7.1□□□□□ -1.27
KDM2A-202ENST00000398645 PRKDCP78527 4128 aaKnown RBP7.09□□□□□ -1.27
KDM2A-202ENST00000398645 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.27
KDM2A-202ENST00000398645 DNAH6Q9C0G6 4158 aa7.04□□□□□ -1.28
KDM2A-202ENST00000398645 DYNC2H1Q8NCM8 4307 aaKnown RBP7.04□□□□□ -1.28
KDM2A-202ENST00000398645 KRTAP12-4P60329 112 aa7□□□□□ -1.29
KDM2A-202ENST00000398645 SACSQ9NZJ4 4579 aa6.95□□□□□ -1.3
KDM2A-202ENST00000398645 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
KDM2A-202ENST00000398645 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
KDM2A-202ENST00000398645 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
KDM2A-202ENST00000398645 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
KDM2A-202ENST00000398645 SPRR2DP22532 72 aa6.83□□□□□ -1.32
KDM2A-202ENST00000398645 HECTD4Q9Y4D8 3996 aa6.77□□□□□ -1.33
KDM2A-202ENST00000398645 MT1XP80297 61 aa6.73□□□□□ -1.33
KDM2A-202ENST00000398645 LCE2BO14633 110 aa6.69□□□□□ -1.34
KDM2A-202ENST00000398645 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
KDM2A-202ENST00000398645 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
KDM2A-202ENST00000398645 LCE3DQ9BYE3 92 aa6.62□□□□□ -1.35
KDM2A-202ENST00000398645 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
KDM2A-202ENST00000398645 LPAP08519 4548 aa6.61□□□□□ -1.35
KDM2A-202ENST00000398645 RYR1P21817 5038 aa6.55□□□□□ -1.36
KDM2A-202ENST00000398645 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
KDM2A-202ENST00000398645 PKD1P98161 4303 aa6.5□□□□□ -1.37
KDM2A-202ENST00000398645 MT1BP07438 61 aa6.5□□□□□ -1.37
KDM2A-202ENST00000398645 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
KDM2A-202ENST00000398645 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
KDM2A-202ENST00000398645 LCE3EQ5T5B0 92 aa6.43□□□□□ -1.38
KDM2A-202ENST00000398645 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
KDM2A-202ENST00000398645 DNHD1Q96M86 4753 aa6.4□□□□□ -1.38
KDM2A-202ENST00000398645 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
KDM2A-202ENST00000398645 LRP1Q07954 4544 aaKnown RBP6.37□□□□□ -1.39
KDM2A-202ENST00000398645 PRM1P04553 51 aa6.36□□□□□ -1.39
KDM2A-202ENST00000398645 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
KDM2A-202ENST00000398645 MT4P47944 62 aa6.33□□□□□ -1.4
KDM2A-202ENST00000398645 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
KDM2A-202ENST00000398645 HSPG2P98160 4391 aa6.27□□□□□ -1.41
KDM2A-202ENST00000398645 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
KDM2A-202ENST00000398645 RYR3Q15413 4870 aa6.23□□□□□ -1.41
KDM2A-202ENST00000398645 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
KDM2A-202ENST00000398645 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
KDM2A-202ENST00000398645 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
KDM2A-202ENST00000398645 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
KDM2A-202ENST00000398645 LCE1BQ5T7P3 118 aa6.19□□□□□ -1.42
KDM2A-202ENST00000398645 PKHD1P08F94 4074 aa6.14□□□□□ -1.43
KDM2A-202ENST00000398645 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
KDM2A-202ENST00000398645 MT1LQ93083 61 aa6.13□□□□□ -1.43
KDM2A-202ENST00000398645 TNXBP22105 4242 aa6.13□□□□□ -1.43
KDM2A-202ENST00000398645 LCE1DQ5T752 114 aa6.08□□□□□ -1.44
KDM2A-202ENST00000398645 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
KDM2A-202ENST00000398645 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
KDM2A-202ENST00000398645 MT1EP04732 61 aa6.02□□□□□ -1.45
KDM2A-202ENST00000398645 LRP2P98164 4655 aa5.93□□□□□ -1.46
KDM2A-202ENST00000398645 HYDINQ4G0P3 5121 aa5.91□□□□□ -1.46
KDM2A-202ENST00000398645 MT1MQ8N339 61 aa5.9□□□□□ -1.47
KDM2A-202ENST00000398645 MT3P25713 68 aa5.85□□□□□ -1.47
KDM2A-202ENST00000398645 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
KDM2A-202ENST00000398645 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
KDM2A-202ENST00000398645 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
KDM2A-202ENST00000398645 MUC17Q685J3 4493 aa5.65□□□□□ -1.51
KDM2A-202ENST00000398645 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms