RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 INE1O15225 51 aa2.87□□□□□ -1.95
PGBD4-201ENST00000397766 COL7A1Q02388 2944 aa2.87□□□□□ -1.95
PGBD4-201ENST00000397766 ALMS1Q8TCU4 4167 aa2.85□□□□□ -1.95
PGBD4-201ENST00000397766 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
PGBD4-201ENST00000397766 RYR3Q15413 4870 aa2.84□□□□□ -1.95
PGBD4-201ENST00000397766 LCE2AQ5TA79 106 aaPredicted RBP2.83□□□□□ -1.96
PGBD4-201ENST00000397766 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
PGBD4-201ENST00000397766 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
PGBD4-201ENST00000397766 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
PGBD4-201ENST00000397766 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
PGBD4-201ENST00000397766 KRTAP4-5Q9BYR2 181 aa2.8□□□□□ -1.96
PGBD4-201ENST00000397766 DNAH7Q8WXX0 4024 aa2.8□□□□□ -1.96
PGBD4-201ENST00000397766 KRTAP3-2Q9BYR7 98 aa2.79□□□□□ -1.96
PGBD4-201ENST00000397766 DNAH9Q9NYC9 4486 aa2.77□□□□□ -1.97
PGBD4-201ENST00000397766 KRTAP3-3Q9BYR6 98 aa2.77□□□□□ -1.97
PGBD4-201ENST00000397766 DYNC2H1Q8NCM8 4307 aaKnown RBP2.74□□□□□ -1.97
PGBD4-201ENST00000397766 BIRC6Q9NR09 4857 aa2.74□□□□□ -1.97
PGBD4-201ENST00000397766 KRTAP10-4P60372 401 aaPredicted RBP2.73□□□□□ -1.97
PGBD4-201ENST00000397766 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
PGBD4-201ENST00000397766 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
PGBD4-201ENST00000397766 DNAH10Q8IVF4 4471 aa2.71□□□□□ -1.97
PGBD4-201ENST00000397766 PRKDCP78527 4128 aaKnown RBP2.71□□□□□ -1.98
PGBD4-201ENST00000397766 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
PGBD4-201ENST00000397766 HERC1Q15751 4861 aa2.7□□□□□ -1.98
PGBD4-201ENST00000397766 HUWE1Q7Z6Z7 4374 aaKnown RBP2.7□□□□□ -1.98
PGBD4-201ENST00000397766 FRAS1Q86XX4 4008 aa2.68□□□□□ -1.98
PGBD4-201ENST00000397766 KMT2CQ8NEZ4 4911 aaKnown RBP2.67□□□□□ -1.98
PGBD4-201ENST00000397766 MEGF8Q7Z7M0 2845 aa2.67□□□□□ -1.98
PGBD4-201ENST00000397766 LORP23490 312 aaPredicted RBP2.67□□□□□ -1.98
PGBD4-201ENST00000397766 MYCBP2O75592 4640 aa2.66□□□□□ -1.98
PGBD4-201ENST00000397766 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
PGBD4-201ENST00000397766 DNAH2Q9P225 4427 aa2.66□□□□□ -1.98
PGBD4-201ENST00000397766 HECTD4Q9Y4D8 3996 aa2.65□□□□□ -1.99
PGBD4-201ENST00000397766 FAT2Q9NYQ8 4349 aa2.64□□□□□ -1.99
PGBD4-201ENST00000397766 DNAH6Q9C0G6 4158 aa2.64□□□□□ -1.99
PGBD4-201ENST00000397766 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
PGBD4-201ENST00000397766 KMT2AQ03164 3969 aa2.64□□□□□ -1.99
PGBD4-201ENST00000397766 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
PGBD4-201ENST00000397766 PLECQ15149 4684 aaKnown RBP2.62□□□□□ -1.99
PGBD4-201ENST00000397766 KIAA1109Q2LD37 5005 aa2.62□□□□□ -1.99
PGBD4-201ENST00000397766 STARD9Q9P2P6 4700 aa2.62□□□□□ -1.99
PGBD4-201ENST00000397766 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
PGBD4-201ENST00000397766 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
PGBD4-201ENST00000397766 ABCA13Q86UQ4 5058 aa2.61□□□□□ -1.99
PGBD4-201ENST00000397766 HYDINQ4G0P3 5121 aa2.6□□□□□ -1.99
PGBD4-201ENST00000397766 PKD1P98161 4303 aa2.59□□□□□ -1.99
PGBD4-201ENST00000397766 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
PGBD4-201ENST00000397766 KRTAP4-8Q9BYQ9 185 aa2.59□□□□□ -2
PGBD4-201ENST00000397766 DNAH11Q96DT5 4516 aa2.59□□□□□ -2
PGBD4-201ENST00000397766 DNAH8Q96JB1 4490 aa2.59□□□□□ -2
PGBD4-201ENST00000397766 DNAH17Q9UFH2 4485 aa2.57□□□□□ -2
PGBD4-201ENST00000397766 HERC2O95714 4834 aa2.55□□□□□ -2
PGBD4-201ENST00000397766 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
PGBD4-201ENST00000397766 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
PGBD4-201ENST00000397766 VPS13BQ7Z7G8 4022 aa2.53□□□□□ -2.01
PGBD4-201ENST00000397766 DNAH5Q8TE73 4624 aa2.52□□□□□ -2.01
PGBD4-201ENST00000397766 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
PGBD4-201ENST00000397766 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.51□□□□□ -2.01
PGBD4-201ENST00000397766 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
PGBD4-201ENST00000397766 SACSQ9NZJ4 4579 aa2.51□□□□□ -2.01
PGBD4-201ENST00000397766 MT1HP80294 61 aa2.5□□□□□ -2.01
PGBD4-201ENST00000397766 FAT3Q8TDW7 4589 aa2.5□□□□□ -2.01
PGBD4-201ENST00000397766 PKHD1P08F94 4074 aa2.49□□□□□ -2.01
PGBD4-201ENST00000397766 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
PGBD4-201ENST00000397766 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
PGBD4-201ENST00000397766 MT2AP02795 61 aa2.45□□□□□ -2.02
PGBD4-201ENST00000397766 SPRR2EP22531 72 aa2.44□□□□□ -2.02
PGBD4-201ENST00000397766 SPRR2BP35325 72 aa2.44□□□□□ -2.02
PGBD4-201ENST00000397766 SPRR2AP35326 72 aa2.44□□□□□ -2.02
PGBD4-201ENST00000397766 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
PGBD4-201ENST00000397766 KRTAP4-1Q9BYQ7 146 aa2.43□□□□□ -2.02
PGBD4-201ENST00000397766 PKHD1L1Q86WI1 4243 aa2.43□□□□□ -2.02
PGBD4-201ENST00000397766 LRP2P98164 4655 aa2.43□□□□□ -2.02
PGBD4-201ENST00000397766 KRTAP9-2Q9BYQ4 174 aa2.42□□□□□ -2.02
PGBD4-201ENST00000397766 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
PGBD4-201ENST00000397766 DYNC1H1Q14204 4646 aaKnown RBP2.42□□□□□ -2.02
PGBD4-201ENST00000397766 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
PGBD4-201ENST00000397766 SPRR2DP22532 72 aa2.38□□□□□ -2.03
PGBD4-201ENST00000397766 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
PGBD4-201ENST00000397766 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
PGBD4-201ENST00000397766 MT1FP04733 61 aa2.37□□□□□ -2.03
PGBD4-201ENST00000397766 USH2AO75445 5202 aa2.36□□□□□ -2.03
PGBD4-201ENST00000397766 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
PGBD4-201ENST00000397766 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
PGBD4-201ENST00000397766 KRTAP9-4Q9BYQ2 154 aa2.35□□□□□ -2.03
PGBD4-201ENST00000397766 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.03
PGBD4-201ENST00000397766 APOBP04114 4563 aaKnown RBP2.33□□□□□ -2.04
PGBD4-201ENST00000397766 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
PGBD4-201ENST00000397766 TNXBP22105 4242 aa2.31□□□□□ -2.04
PGBD4-201ENST00000397766 HSPG2P98160 4391 aa2.3□□□□□ -2.04
PGBD4-201ENST00000397766 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
PGBD4-201ENST00000397766 LCE2BO14633 110 aa2.3□□□□□ -2.04
PGBD4-201ENST00000397766 KRTAP9-6A0A140TA67 174 aa2.29□□□□□ -2.04
PGBD4-201ENST00000397766 KRTAP4-7Q9BYR0 210 aa2.28□□□□□ -2.04
PGBD4-201ENST00000397766 LRP1Q07954 4544 aaKnown RBP2.28□□□□□ -2.04
PGBD4-201ENST00000397766 FAT1Q14517 4588 aa2.27□□□□□ -2.05
PGBD4-201ENST00000397766 HMCN2Q8NDA2 5059 aa2.26□□□□□ -2.05
PGBD4-201ENST00000397766 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
PGBD4-201ENST00000397766 KRTAP19-1Q8IUB9 90 aa2.24□□□□□ -2.05
PGBD4-201ENST00000397766 LPAP08519 4548 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms