RNA–Protein interactions for RNA: ENST00000397677.5

CHMP7-202, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-202ENST00000397677 FAT1Q14517 4588 aa7.12□□□□□ -1.27
CHMP7-202ENST00000397677 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
CHMP7-202ENST00000397677 S4R3F8 94 aa7.1□□□□□ -1.27
CHMP7-202ENST00000397677 KRTAP3-3Q9BYR6 98 aa7.1□□□□□ -1.27
CHMP7-202ENST00000397677 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
CHMP7-202ENST00000397677 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
CHMP7-202ENST00000397677 MYCBP2O75592 4640 aa7.02□□□□□ -1.29
CHMP7-202ENST00000397677 SACSQ9NZJ4 4579 aa7.01□□□□□ -1.29
CHMP7-202ENST00000397677 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
CHMP7-202ENST00000397677 DYNC1H1Q14204 4646 aaKnown RBP7□□□□□ -1.29
CHMP7-202ENST00000397677 HSPG2P98160 4391 aa6.95□□□□□ -1.3
CHMP7-202ENST00000397677 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
CHMP7-202ENST00000397677 LUZP6Q538Z0 58 aa6.91□□□□□ -1.3
CHMP7-202ENST00000397677 APOBP04114 4563 aaKnown RBP6.89□□□□□ -1.31
CHMP7-202ENST00000397677 LRP1Q07954 4544 aaKnown RBP6.87□□□□□ -1.31
CHMP7-202ENST00000397677 PKHD1L1Q86WI1 4243 aa6.85□□□□□ -1.31
CHMP7-202ENST00000397677 XP32Q5T750 250 aa6.85□□□□□ -1.31
CHMP7-202ENST00000397677 FAT3Q8TDW7 4589 aa6.79□□□□□ -1.32
CHMP7-202ENST00000397677 LPAP08519 4548 aa6.78□□□□□ -1.32
CHMP7-202ENST00000397677 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
CHMP7-202ENST00000397677 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
CHMP7-202ENST00000397677 M0QZ58 72 aa6.69□□□□□ -1.34
CHMP7-202ENST00000397677 R4GN34 69 aa6.62□□□□□ -1.35
CHMP7-202ENST00000397677 KMT2CQ8NEZ4 4911 aaKnown RBP6.61□□□□□ -1.35
CHMP7-202ENST00000397677 LRP2P98164 4655 aa6.6□□□□□ -1.35
CHMP7-202ENST00000397677 TNXBP22105 4242 aa6.6□□□□□ -1.35
CHMP7-202ENST00000397677 Q5VSD8 79 aa6.54□□□□□ -1.36
CHMP7-202ENST00000397677 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
CHMP7-202ENST00000397677 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
CHMP7-202ENST00000397677 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
CHMP7-202ENST00000397677 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
CHMP7-202ENST00000397677 KRTAP21-3Q3LHN1 58 aa6.37□□□□□ -1.39
CHMP7-202ENST00000397677 RYR1P21817 5038 aa6.37□□□□□ -1.39
CHMP7-202ENST00000397677 RYR3Q15413 4870 aa6.3□□□□□ -1.4
CHMP7-202ENST00000397677 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
CHMP7-202ENST00000397677 RYR2Q92736 4967 aa6.28□□□□□ -1.4
CHMP7-202ENST00000397677 MT1HL1P0DM35 61 aa6.24□□□□□ -1.41
CHMP7-202ENST00000397677 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
CHMP7-202ENST00000397677 ABCA13Q86UQ4 5058 aa6.22□□□□□ -1.41
CHMP7-202ENST00000397677 J3QL48 77 aa6.21□□□□□ -1.41
CHMP7-202ENST00000397677 MUC2Q02817 5179 aa6.17□□□□□ -1.42
CHMP7-202ENST00000397677 EPPK1P58107 5090 aaKnown RBP6.15□□□□□ -1.43
CHMP7-202ENST00000397677 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.43
CHMP7-202ENST00000397677 KRTAP4-5Q9BYR2 181 aa6.1□□□□□ -1.43
CHMP7-202ENST00000397677 TNP1P09430 55 aa6.08□□□□□ -1.44
CHMP7-202ENST00000397677 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
CHMP7-202ENST00000397677 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
CHMP7-202ENST00000397677 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
CHMP7-202ENST00000397677 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
CHMP7-202ENST00000397677 M0R2T5 61 aa5.87□□□□□ -1.47
CHMP7-202ENST00000397677 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
CHMP7-202ENST00000397677 PCLOQ9Y6V0 5065 aa5.8□□□□□ -1.48
CHMP7-202ENST00000397677 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
CHMP7-202ENST00000397677 HERC2O95714 4834 aa5.8□□□□□ -1.48
CHMP7-202ENST00000397677 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
CHMP7-202ENST00000397677 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
CHMP7-202ENST00000397677 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
CHMP7-202ENST00000397677 HERC1Q15751 4861 aa5.73□□□□□ -1.49
CHMP7-202ENST00000397677 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
CHMP7-202ENST00000397677 INE1O15225 51 aa5.65□□□□□ -1.5
CHMP7-202ENST00000397677 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
CHMP7-202ENST00000397677 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
CHMP7-202ENST00000397677 UBR4Q5T4S7 5183 aa5.5□□□□□ -1.53
CHMP7-202ENST00000397677 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
CHMP7-202ENST00000397677 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
CHMP7-202ENST00000397677 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
CHMP7-202ENST00000397677 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
CHMP7-202ENST00000397677 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.55
CHMP7-202ENST00000397677 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
CHMP7-202ENST00000397677 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
CHMP7-202ENST00000397677 MT1FP04733 61 aa5.32□□□□□ -1.56
CHMP7-202ENST00000397677 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
CHMP7-202ENST00000397677 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
CHMP7-202ENST00000397677 MT2AP02795 61 aa5.25□□□□□ -1.57
CHMP7-202ENST00000397677 MT1XP80297 61 aa5.25□□□□□ -1.57
CHMP7-202ENST00000397677 KMT2DO14686 5537 aa5.23□□□□□ -1.57
CHMP7-202ENST00000397677 USH2AO75445 5202 aa5.23□□□□□ -1.57
CHMP7-202ENST00000397677 MT1HP80294 61 aa5.2□□□□□ -1.58
CHMP7-202ENST00000397677 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
CHMP7-202ENST00000397677 MT1BP07438 61 aa5.17□□□□□ -1.58
CHMP7-202ENST00000397677 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
CHMP7-202ENST00000397677 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
CHMP7-202ENST00000397677 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
CHMP7-202ENST00000397677 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
CHMP7-202ENST00000397677 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
CHMP7-202ENST00000397677 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
CHMP7-202ENST00000397677 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
CHMP7-202ENST00000397677 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
CHMP7-202ENST00000397677 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
CHMP7-202ENST00000397677 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
CHMP7-202ENST00000397677 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
CHMP7-202ENST00000397677 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
CHMP7-202ENST00000397677 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
CHMP7-202ENST00000397677 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
CHMP7-202ENST00000397677 LCE2BO14633 110 aa4.7□□□□□ -1.66
CHMP7-202ENST00000397677 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
CHMP7-202ENST00000397677 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
CHMP7-202ENST00000397677 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
CHMP7-202ENST00000397677 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
CHMP7-202ENST00000397677 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms