RNA–Protein interactions for RNA: ENST00000397677.5

CHMP7-202, Transcript of charged multivesicular body protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP7, Length 3,403 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-202ENST00000397677 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
CHMP7-202ENST00000397677 HRCP23327 699 aa23.4■■□□□ 1.34
CHMP7-202ENST00000397677 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
CHMP7-202ENST00000397677 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
CHMP7-202ENST00000397677 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
CHMP7-202ENST00000397677 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
CHMP7-202ENST00000397677 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
CHMP7-202ENST00000397677 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
CHMP7-202ENST00000397677 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.2
CHMP7-202ENST00000397677 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.16
CHMP7-202ENST00000397677 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
CHMP7-202ENST00000397677 TRIM26Q12899 539 aaPredicted RBP22.1■■□□□ 1.13
CHMP7-202ENST00000397677 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
CHMP7-202ENST00000397677 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
CHMP7-202ENST00000397677 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.08
CHMP7-202ENST00000397677 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
CHMP7-202ENST00000397677 NEUROD1Q13562 356 aa21.71■■□□□ 1.07
CHMP7-202ENST00000397677 MYT1Q01538 1121 aa21.71■■□□□ 1.07
CHMP7-202ENST00000397677 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
CHMP7-202ENST00000397677 ACIN1Q9UKV3 1341 aaKnown RBP21.66■■□□□ 1.06
CHMP7-202ENST00000397677 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.06
CHMP7-202ENST00000397677 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.04
CHMP7-202ENST00000397677 ZCCHC6Q5VYS8 1495 aaKnown RBP21.53■■□□□ 1.04
CHMP7-202ENST00000397677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
CHMP7-202ENST00000397677 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
CHMP7-202ENST00000397677 CCER1Q8TC90 406 aaPredicted RBP21.33■■□□□ 1.01
CHMP7-202ENST00000397677 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
CHMP7-202ENST00000397677 YTHDC1Q96MU7 727 aaKnown RBP21.28■■□□□ 1
CHMP7-202ENST00000397677 TRIM41Q8WV44 630 aa21.27■■□□□ 1
CHMP7-202ENST00000397677 TTBK1Q5TCY1 1321 aaPredicted RBP21.19■□□□□ 0.98
CHMP7-202ENST00000397677 MIER1Q8N108 512 aa20.8■□□□□ 0.92
CHMP7-202ENST00000397677 ZNF316A6NFI3 1004 aaPredicted RBP20.79■□□□□ 0.92
CHMP7-202ENST00000397677 BCL11AQ9H165 835 aa20.69■□□□□ 0.9
CHMP7-202ENST00000397677 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
CHMP7-202ENST00000397677 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
CHMP7-202ENST00000397677 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
CHMP7-202ENST00000397677 ABCC9O60706 1549 aa20.46■□□□□ 0.87
CHMP7-202ENST00000397677 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
CHMP7-202ENST00000397677 ANP32EQ9BTT0 268 aa20.45■□□□□ 0.86
CHMP7-202ENST00000397677 TSHZ2Q9NRE2 1034 aa20.4■□□□□ 0.86
CHMP7-202ENST00000397677 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
CHMP7-202ENST00000397677 BCANQ96GW7 911 aa20.33■□□□□ 0.85
CHMP7-202ENST00000397677 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
CHMP7-202ENST00000397677 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
CHMP7-202ENST00000397677 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
CHMP7-202ENST00000397677 RANGAP1P46060 587 aaPredicted RBP20.11■□□□□ 0.81
CHMP7-202ENST00000397677 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
CHMP7-202ENST00000397677 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.8
CHMP7-202ENST00000397677 KCNH8Q96L42 1107 aa20.08■□□□□ 0.8
CHMP7-202ENST00000397677 PRKCSHP14314 528 aaPredicted RBP20.05■□□□□ 0.8
CHMP7-202ENST00000397677 FKBP8Q14318 412 aa20.03■□□□□ 0.8
CHMP7-202ENST00000397677 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
CHMP7-202ENST00000397677 SOGA1O94964 1423 aa20■□□□□ 0.79
CHMP7-202ENST00000397677 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
CHMP7-202ENST00000397677 ITGAEP38570 1179 aa19.98■□□□□ 0.79
CHMP7-202ENST00000397677 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
CHMP7-202ENST00000397677 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
CHMP7-202ENST00000397677 TNIKQ9UKE5 1360 aa19.94■□□□□ 0.78
CHMP7-202ENST00000397677 RBM19Q9Y4C8 960 aaKnown RBP19.94■□□□□ 0.78
CHMP7-202ENST00000397677 APLP2Q06481 763 aa19.92■□□□□ 0.78
CHMP7-202ENST00000397677 WIZO95785 1651 aa19.92■□□□□ 0.78
CHMP7-202ENST00000397677 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
CHMP7-202ENST00000397677 NEFLP07196 543 aa19.79■□□□□ 0.76
CHMP7-202ENST00000397677 MSH5O43196 834 aa19.77■□□□□ 0.76
CHMP7-202ENST00000397677 TRIM52Q96A61 297 aa19.77■□□□□ 0.75
CHMP7-202ENST00000397677 ERICH6Q7L0X2 663 aa19.74■□□□□ 0.75
CHMP7-202ENST00000397677 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
CHMP7-202ENST00000397677 DHX57Q6P158 1386 aaKnown RBP19.71■□□□□ 0.75
CHMP7-202ENST00000397677 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
CHMP7-202ENST00000397677 HIRIP3Q9BW71 556 aaPredicted RBP19.66■□□□□ 0.74
CHMP7-202ENST00000397677 CLIP1P30622 1438 aa19.65■□□□□ 0.74
CHMP7-202ENST00000397677 IRX6P78412 446 aaPredicted RBP19.64■□□□□ 0.74
CHMP7-202ENST00000397677 EIF4G1Q04637 1599 aaKnown RBP19.62■□□□□ 0.73
CHMP7-202ENST00000397677 BAZ1AQ9NRL2 1556 aaPredicted RBP19.55■□□□□ 0.72
CHMP7-202ENST00000397677 VPS8Q8N3P4 1428 aa19.54■□□□□ 0.72
CHMP7-202ENST00000397677 EEA1Q15075 1411 aa19.52■□□□□ 0.72
CHMP7-202ENST00000397677 KANK4Q5T7N3 995 aaPredicted RBP19.51■□□□□ 0.71
CHMP7-202ENST00000397677 ANO8Q9HCE9 1232 aaPredicted RBP19.5■□□□□ 0.71
CHMP7-202ENST00000397677 DEKP35659 375 aaKnown RBP19.48■□□□□ 0.71
CHMP7-202ENST00000397677 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
CHMP7-202ENST00000397677 NBR1Q14596 966 aa19.44■□□□□ 0.7
CHMP7-202ENST00000397677 SIN3AQ96ST3 1273 aa19.44■□□□□ 0.7
CHMP7-202ENST00000397677 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
CHMP7-202ENST00000397677 ANP32CO43423 234 aa19.4■□□□□ 0.7
CHMP7-202ENST00000397677 NACADO15069 1562 aa19.4■□□□□ 0.7
CHMP7-202ENST00000397677 RAPGEF2Q9Y4G8 1499 aa19.37■□□□□ 0.69
CHMP7-202ENST00000397677 FANCIQ9NVI1 1328 aa19.37■□□□□ 0.69
CHMP7-202ENST00000397677 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
CHMP7-202ENST00000397677 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHMP7-202ENST00000397677 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.69
CHMP7-202ENST00000397677 KIF21BO75037 1637 aa19.32■□□□□ 0.68
CHMP7-202ENST00000397677 PPP1R15AO75807 674 aaPredicted RBP19.31■□□□□ 0.68
CHMP7-202ENST00000397677 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
CHMP7-202ENST00000397677 SALL2Q9Y467 1007 aaPredicted RBP19.26■□□□□ 0.67
CHMP7-202ENST00000397677 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
CHMP7-202ENST00000397677 B4GALNT3Q6L9W6 998 aa19.24■□□□□ 0.67
CHMP7-202ENST00000397677 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
CHMP7-202ENST00000397677 RTN4Q9NQC3 1192 aaKnown RBP19.23■□□□□ 0.67
CHMP7-202ENST00000397677 CCER2I3L3R5 266 aa19.22■□□□□ 0.67
CHMP7-202ENST00000397677 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms