RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
IFT140-202ENST00000397417 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
IFT140-202ENST00000397417 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
IFT140-202ENST00000397417 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
IFT140-202ENST00000397417 RYR1P21817 5038 aa5.69□□□□□ -1.5
IFT140-202ENST00000397417 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
IFT140-202ENST00000397417 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
IFT140-202ENST00000397417 H0YAA0 97 aa5.66□□□□□ -1.5
IFT140-202ENST00000397417 LUZP6Q538Z0 58 aa5.65□□□□□ -1.5
IFT140-202ENST00000397417 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
IFT140-202ENST00000397417 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
IFT140-202ENST00000397417 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
IFT140-202ENST00000397417 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
IFT140-202ENST00000397417 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
IFT140-202ENST00000397417 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
IFT140-202ENST00000397417 FAT2Q9NYQ8 4349 aa5.61□□□□□ -1.51
IFT140-202ENST00000397417 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
IFT140-202ENST00000397417 DYNC1H1Q14204 4646 aaKnown RBP5.6□□□□□ -1.51
IFT140-202ENST00000397417 PKD1P98161 4303 aa5.59□□□□□ -1.51
IFT140-202ENST00000397417 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
IFT140-202ENST00000397417 SACSQ9NZJ4 4579 aa5.58□□□□□ -1.52
IFT140-202ENST00000397417 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
IFT140-202ENST00000397417 VPS13BQ7Z7G8 4022 aa5.53□□□□□ -1.52
IFT140-202ENST00000397417 RYR3Q15413 4870 aa5.52□□□□□ -1.53
IFT140-202ENST00000397417 LRP1Q07954 4544 aaKnown RBP5.5□□□□□ -1.53
IFT140-202ENST00000397417 RYR2Q92736 4967 aa5.47□□□□□ -1.53
IFT140-202ENST00000397417 KMT2CQ8NEZ4 4911 aaKnown RBP5.41□□□□□ -1.54
IFT140-202ENST00000397417 PKHD1P08F94 4074 aa5.41□□□□□ -1.54
IFT140-202ENST00000397417 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
IFT140-202ENST00000397417 KRTAP13-4Q3LI77 160 aa5.39□□□□□ -1.55
IFT140-202ENST00000397417 KRTAP12-2P59991 146 aa5.38□□□□□ -1.55
IFT140-202ENST00000397417 TNP1P09430 55 aa5.35□□□□□ -1.55
IFT140-202ENST00000397417 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
IFT140-202ENST00000397417 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
IFT140-202ENST00000397417 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
IFT140-202ENST00000397417 LRP2P98164 4655 aa5.29□□□□□ -1.56
IFT140-202ENST00000397417 PKHD1L1Q86WI1 4243 aa5.26□□□□□ -1.57
IFT140-202ENST00000397417 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
IFT140-202ENST00000397417 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
IFT140-202ENST00000397417 HERC2O95714 4834 aa5.24□□□□□ -1.57
IFT140-202ENST00000397417 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
IFT140-202ENST00000397417 HSPG2P98160 4391 aa5.19□□□□□ -1.58
IFT140-202ENST00000397417 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
IFT140-202ENST00000397417 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
IFT140-202ENST00000397417 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
IFT140-202ENST00000397417 EPPK1P58107 5090 aaKnown RBP5.13□□□□□ -1.59
IFT140-202ENST00000397417 TNXBP22105 4242 aa5.07□□□□□ -1.6
IFT140-202ENST00000397417 LPAP08519 4548 aa5.04□□□□□ -1.6
IFT140-202ENST00000397417 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
IFT140-202ENST00000397417 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
IFT140-202ENST00000397417 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
IFT140-202ENST00000397417 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
IFT140-202ENST00000397417 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
IFT140-202ENST00000397417 MUC2Q02817 5179 aa4.91□□□□□ -1.62
IFT140-202ENST00000397417 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
IFT140-202ENST00000397417 HERC1Q15751 4861 aa4.87□□□□□ -1.63
IFT140-202ENST00000397417 MT1HP80294 61 aa4.8□□□□□ -1.64
IFT140-202ENST00000397417 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
IFT140-202ENST00000397417 FAT4Q6V0I7 4981 aa4.77□□□□□ -1.65
IFT140-202ENST00000397417 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
IFT140-202ENST00000397417 MT2AP02795 61 aa4.72□□□□□ -1.65
IFT140-202ENST00000397417 MT1FP04733 61 aa4.72□□□□□ -1.65
IFT140-202ENST00000397417 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
IFT140-202ENST00000397417 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
IFT140-202ENST00000397417 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
IFT140-202ENST00000397417 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
IFT140-202ENST00000397417 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
IFT140-202ENST00000397417 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
IFT140-202ENST00000397417 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
IFT140-202ENST00000397417 KRTAP19-1Q8IUB9 90 aa4.5□□□□□ -1.69
IFT140-202ENST00000397417 INE1O15225 51 aa4.49□□□□□ -1.69
IFT140-202ENST00000397417 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
IFT140-202ENST00000397417 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
IFT140-202ENST00000397417 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
IFT140-202ENST00000397417 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
IFT140-202ENST00000397417 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
IFT140-202ENST00000397417 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.7
IFT140-202ENST00000397417 FLGP20930 4061 aaPredicted RBP4.4□□□□□ -1.71
IFT140-202ENST00000397417 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
IFT140-202ENST00000397417 USH2AO75445 5202 aa4.35□□□□□ -1.71
IFT140-202ENST00000397417 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
IFT140-202ENST00000397417 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
IFT140-202ENST00000397417 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
IFT140-202ENST00000397417 MT1BP07438 61 aa4.3□□□□□ -1.72
IFT140-202ENST00000397417 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
IFT140-202ENST00000397417 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
IFT140-202ENST00000397417 MT1XP80297 61 aa4.26□□□□□ -1.73
IFT140-202ENST00000397417 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
IFT140-202ENST00000397417 LCE2BO14633 110 aa4.22□□□□□ -1.73
IFT140-202ENST00000397417 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
IFT140-202ENST00000397417 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.73
IFT140-202ENST00000397417 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
IFT140-202ENST00000397417 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
IFT140-202ENST00000397417 KMT2DO14686 5537 aa4.13□□□□□ -1.75
IFT140-202ENST00000397417 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
IFT140-202ENST00000397417 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
IFT140-202ENST00000397417 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
IFT140-202ENST00000397417 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
IFT140-202ENST00000397417 MT1GP13640 62 aa3.97□□□□□ -1.77
IFT140-202ENST00000397417 LCE2DQ5TA82 110 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms