RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 COL7A1Q02388 2944 aa5.13□□□□□ -1.59
SMU1-201ENST00000397149 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
SMU1-201ENST00000397149 MT1HL1P0DM35 61 aa5.1□□□□□ -1.59
SMU1-201ENST00000397149 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
SMU1-201ENST00000397149 DNAH10Q8IVF4 4471 aa4.99□□□□□ -1.61
SMU1-201ENST00000397149 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
SMU1-201ENST00000397149 ALMS1Q8TCU4 4167 aa4.96□□□□□ -1.61
SMU1-201ENST00000397149 DNAH9Q9NYC9 4486 aa4.96□□□□□ -1.62
SMU1-201ENST00000397149 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
SMU1-201ENST00000397149 CMYA5Q8N3K9 4069 aa4.92□□□□□ -1.62
SMU1-201ENST00000397149 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
SMU1-201ENST00000397149 LYSTQ99698 3801 aa4.9□□□□□ -1.62
SMU1-201ENST00000397149 DNAH1Q9P2D7 4330 aa4.9□□□□□ -1.62
SMU1-201ENST00000397149 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
SMU1-201ENST00000397149 KMT2AQ03164 3969 aa4.86□□□□□ -1.63
SMU1-201ENST00000397149 ANK2Q01484 3957 aa4.84□□□□□ -1.63
SMU1-201ENST00000397149 DNAH3Q8TD57 4116 aa4.8□□□□□ -1.64
SMU1-201ENST00000397149 PLECQ15149 4684 aaKnown RBP4.79□□□□□ -1.64
SMU1-201ENST00000397149 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
SMU1-201ENST00000397149 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
SMU1-201ENST00000397149 DNAH2Q9P225 4427 aa4.71□□□□□ -1.66
SMU1-201ENST00000397149 SPRR2EP22531 72 aa4.7□□□□□ -1.66
SMU1-201ENST00000397149 SPRR2BP35325 72 aa4.7□□□□□ -1.66
SMU1-201ENST00000397149 SPRR2AP35326 72 aa4.7□□□□□ -1.66
SMU1-201ENST00000397149 STARD9Q9P2P6 4700 aa4.69□□□□□ -1.66
SMU1-201ENST00000397149 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
SMU1-201ENST00000397149 PRKDCP78527 4128 aaKnown RBP4.68□□□□□ -1.66
SMU1-201ENST00000397149 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
SMU1-201ENST00000397149 MT1HP80294 61 aa4.64□□□□□ -1.67
SMU1-201ENST00000397149 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
SMU1-201ENST00000397149 VPS13BQ7Z7G8 4022 aa4.64□□□□□ -1.67
SMU1-201ENST00000397149 VPS13DQ5THJ4 4388 aa4.6□□□□□ -1.67
SMU1-201ENST00000397149 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
SMU1-201ENST00000397149 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
SMU1-201ENST00000397149 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
SMU1-201ENST00000397149 MT2AP02795 61 aa4.56□□□□□ -1.68
SMU1-201ENST00000397149 KRTAP4-1Q9BYQ7 146 aa4.55□□□□□ -1.68
SMU1-201ENST00000397149 DNAH17Q9UFH2 4485 aa4.55□□□□□ -1.68
SMU1-201ENST00000397149 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
SMU1-201ENST00000397149 SPRR2DP22532 72 aa4.53□□□□□ -1.68
SMU1-201ENST00000397149 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
SMU1-201ENST00000397149 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
SMU1-201ENST00000397149 DYNC2H1Q8NCM8 4307 aaKnown RBP4.51□□□□□ -1.69
SMU1-201ENST00000397149 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
SMU1-201ENST00000397149 MT1GP13640 62 aa4.5□□□□□ -1.69
SMU1-201ENST00000397149 MT1FP04733 61 aa4.47□□□□□ -1.69
SMU1-201ENST00000397149 FAT1Q14517 4588 aa4.44□□□□□ -1.7
SMU1-201ENST00000397149 LCE2BO14633 110 aa4.43□□□□□ -1.7
SMU1-201ENST00000397149 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
SMU1-201ENST00000397149 DNHD1Q96M86 4753 aa4.41□□□□□ -1.7
SMU1-201ENST00000397149 DYNC1H1Q14204 4646 aaKnown RBP4.35□□□□□ -1.71
SMU1-201ENST00000397149 SACSQ9NZJ4 4579 aa4.35□□□□□ -1.71
SMU1-201ENST00000397149 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
SMU1-201ENST00000397149 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
SMU1-201ENST00000397149 PKHD1P08F94 4074 aa4.27□□□□□ -1.73
SMU1-201ENST00000397149 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
SMU1-201ENST00000397149 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
SMU1-201ENST00000397149 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
SMU1-201ENST00000397149 LPAP08519 4548 aa4.21□□□□□ -1.73
SMU1-201ENST00000397149 KRTAP17-1Q9BYP8 105 aa4.21□□□□□ -1.74
SMU1-201ENST00000397149 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.74
SMU1-201ENST00000397149 FAT3Q8TDW7 4589 aa4.18□□□□□ -1.74
SMU1-201ENST00000397149 MT4P47944 62 aa4.17□□□□□ -1.74
SMU1-201ENST00000397149 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
SMU1-201ENST00000397149 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
SMU1-201ENST00000397149 KRTAP4-8Q9BYQ9 185 aa4.17□□□□□ -1.74
SMU1-201ENST00000397149 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
SMU1-201ENST00000397149 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
SMU1-201ENST00000397149 HSPG2P98160 4391 aa4.16□□□□□ -1.74
SMU1-201ENST00000397149 HYDINQ4G0P3 5121 aa4.15□□□□□ -1.75
SMU1-201ENST00000397149 RYR1P21817 5038 aa4.15□□□□□ -1.75
SMU1-201ENST00000397149 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
SMU1-201ENST00000397149 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
SMU1-201ENST00000397149 PKD1P98161 4303 aa4.07□□□□□ -1.76
SMU1-201ENST00000397149 PRM1P04553 51 aa4.06□□□□□ -1.76
SMU1-201ENST00000397149 MT1XP80297 61 aa4.03□□□□□ -1.76
SMU1-201ENST00000397149 TNXBP22105 4242 aa4.03□□□□□ -1.76
SMU1-201ENST00000397149 PKHD1L1Q86WI1 4243 aa4.01□□□□□ -1.77
SMU1-201ENST00000397149 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
SMU1-201ENST00000397149 KRTAP19-1Q8IUB9 90 aa4□□□□□ -1.77
SMU1-201ENST00000397149 RYR3Q15413 4870 aa3.98□□□□□ -1.77
SMU1-201ENST00000397149 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
SMU1-201ENST00000397149 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
SMU1-201ENST00000397149 MT1BP07438 61 aa3.87□□□□□ -1.79
SMU1-201ENST00000397149 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
SMU1-201ENST00000397149 MT3P25713 68 aa3.87□□□□□ -1.79
SMU1-201ENST00000397149 LRP2P98164 4655 aa3.85□□□□□ -1.79
SMU1-201ENST00000397149 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
SMU1-201ENST00000397149 KRTAP9-8Q9BYQ0 159 aa3.77□□□□□ -1.81
SMU1-201ENST00000397149 RYR2Q92736 4967 aa3.76□□□□□ -1.81
SMU1-201ENST00000397149 KMT2CQ8NEZ4 4911 aaKnown RBP3.75□□□□□ -1.81
SMU1-201ENST00000397149 MT1LQ93083 61 aa3.75□□□□□ -1.81
SMU1-201ENST00000397149 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
SMU1-201ENST00000397149 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
SMU1-201ENST00000397149 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
SMU1-201ENST00000397149 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
SMU1-201ENST00000397149 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
SMU1-201ENST00000397149 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.81
SMU1-201ENST00000397149 FLGP20930 4061 aaPredicted RBP3.71□□□□□ -1.82
SMU1-201ENST00000397149 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms