RNA–Protein interactions for RNA: ENST00000396819.7

LTBP4-205, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-205ENST00000396819 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
LTBP4-205ENST00000396819 ANK2Q01484 3957 aa7.89□□□□□ -1.15
LTBP4-205ENST00000396819 FAT1Q14517 4588 aa7.88□□□□□ -1.15
LTBP4-205ENST00000396819 RYR1P21817 5038 aa7.86□□□□□ -1.15
LTBP4-205ENST00000396819 DNAH10Q8IVF4 4471 aa7.86□□□□□ -1.15
LTBP4-205ENST00000396819 KRTAP12-1P59990 96 aa7.85□□□□□ -1.15
LTBP4-205ENST00000396819 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
LTBP4-205ENST00000396819 LRP1BQ9NZR2 4599 aa7.85□□□□□ -1.15
LTBP4-205ENST00000396819 DNAH17Q9UFH2 4485 aa7.79□□□□□ -1.16
LTBP4-205ENST00000396819 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.17
LTBP4-205ENST00000396819 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
LTBP4-205ENST00000396819 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
LTBP4-205ENST00000396819 DNAH2Q9P225 4427 aa7.66□□□□□ -1.18
LTBP4-205ENST00000396819 RYR3Q15413 4870 aa7.65□□□□□ -1.18
LTBP4-205ENST00000396819 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
LTBP4-205ENST00000396819 KMT2AQ03164 3969 aa7.63□□□□□ -1.19
LTBP4-205ENST00000396819 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
LTBP4-205ENST00000396819 DYNC2H1Q8NCM8 4307 aaKnown RBP7.58□□□□□ -1.2
LTBP4-205ENST00000396819 SACSQ9NZJ4 4579 aa7.57□□□□□ -1.2
LTBP4-205ENST00000396819 KRTAP4-1Q9BYQ7 146 aa7.55□□□□□ -1.2
LTBP4-205ENST00000396819 LYSTQ99698 3801 aa7.54□□□□□ -1.2
LTBP4-205ENST00000396819 DNAH3Q8TD57 4116 aa7.51□□□□□ -1.21
LTBP4-205ENST00000396819 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
LTBP4-205ENST00000396819 DNAH8Q96JB1 4490 aa7.45□□□□□ -1.22
LTBP4-205ENST00000396819 VPS13BQ7Z7G8 4022 aa7.42□□□□□ -1.22
LTBP4-205ENST00000396819 RYR2Q92736 4967 aa7.41□□□□□ -1.22
LTBP4-205ENST00000396819 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.22
LTBP4-205ENST00000396819 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
LTBP4-205ENST00000396819 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
LTBP4-205ENST00000396819 MT1HP80294 61 aa7.36□□□□□ -1.23
LTBP4-205ENST00000396819 MYCBP2O75592 4640 aa7.34□□□□□ -1.23
LTBP4-205ENST00000396819 HERC2O95714 4834 aa7.34□□□□□ -1.23
LTBP4-205ENST00000396819 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
LTBP4-205ENST00000396819 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
LTBP4-205ENST00000396819 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
LTBP4-205ENST00000396819 LRP1Q07954 4544 aaKnown RBP7.28□□□□□ -1.24
LTBP4-205ENST00000396819 HYDINQ4G0P3 5121 aa7.22□□□□□ -1.25
LTBP4-205ENST00000396819 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
LTBP4-205ENST00000396819 MT2AP02795 61 aa7.19□□□□□ -1.26
LTBP4-205ENST00000396819 DNAH6Q9C0G6 4158 aa7.17□□□□□ -1.26
LTBP4-205ENST00000396819 DNAH7Q8WXX0 4024 aa7.13□□□□□ -1.27
LTBP4-205ENST00000396819 KMT2CQ8NEZ4 4911 aaKnown RBP7.12□□□□□ -1.27
LTBP4-205ENST00000396819 MT1FP04733 61 aa7.06□□□□□ -1.28
LTBP4-205ENST00000396819 HECTD4Q9Y4D8 3996 aa7.04□□□□□ -1.28
LTBP4-205ENST00000396819 PKHD1P08F94 4074 aa7.04□□□□□ -1.28
LTBP4-205ENST00000396819 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
LTBP4-205ENST00000396819 HSPG2P98160 4391 aa7.02□□□□□ -1.29
LTBP4-205ENST00000396819 SPRR2GQ9BYE4 73 aa7.01□□□□□ -1.29
LTBP4-205ENST00000396819 CRCT1Q9UGL9 99 aa7□□□□□ -1.29
LTBP4-205ENST00000396819 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
LTBP4-205ENST00000396819 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.29
LTBP4-205ENST00000396819 PCLOQ9Y6V0 5065 aa6.96□□□□□ -1.3
LTBP4-205ENST00000396819 LRP2P98164 4655 aa6.96□□□□□ -1.3
LTBP4-205ENST00000396819 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
LTBP4-205ENST00000396819 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.31
LTBP4-205ENST00000396819 HERC1Q15751 4861 aa6.86□□□□□ -1.31
LTBP4-205ENST00000396819 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
LTBP4-205ENST00000396819 PKD1P98161 4303 aa6.78□□□□□ -1.32
LTBP4-205ENST00000396819 ABCA13Q86UQ4 5058 aa6.73□□□□□ -1.33
LTBP4-205ENST00000396819 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
LTBP4-205ENST00000396819 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
LTBP4-205ENST00000396819 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
LTBP4-205ENST00000396819 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
LTBP4-205ENST00000396819 SPRR2FQ96RM1 72 aa6.6□□□□□ -1.35
LTBP4-205ENST00000396819 LPAP08519 4548 aa6.6□□□□□ -1.35
LTBP4-205ENST00000396819 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
LTBP4-205ENST00000396819 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
LTBP4-205ENST00000396819 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.38
LTBP4-205ENST00000396819 MT1BP07438 61 aa6.46□□□□□ -1.38
LTBP4-205ENST00000396819 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
LTBP4-205ENST00000396819 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
LTBP4-205ENST00000396819 TNXBP22105 4242 aa6.41□□□□□ -1.38
LTBP4-205ENST00000396819 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
LTBP4-205ENST00000396819 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
LTBP4-205ENST00000396819 MT1XP80297 61 aa6.38□□□□□ -1.39
LTBP4-205ENST00000396819 RNF213Q63HN8 5207 aa6.3□□□□□ -1.4
LTBP4-205ENST00000396819 INE1O15225 51 aa6.28□□□□□ -1.4
LTBP4-205ENST00000396819 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
LTBP4-205ENST00000396819 MUC17Q685J3 4493 aa6.26□□□□□ -1.41
LTBP4-205ENST00000396819 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
LTBP4-205ENST00000396819 LCE2BO14633 110 aa6.25□□□□□ -1.41
LTBP4-205ENST00000396819 SPRR2EP22531 72 aa6.2□□□□□ -1.42
LTBP4-205ENST00000396819 SPRR2BP35325 72 aa6.2□□□□□ -1.42
LTBP4-205ENST00000396819 SPRR2AP35326 72 aa6.2□□□□□ -1.42
LTBP4-205ENST00000396819 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
LTBP4-205ENST00000396819 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
LTBP4-205ENST00000396819 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
LTBP4-205ENST00000396819 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
LTBP4-205ENST00000396819 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.43
LTBP4-205ENST00000396819 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
LTBP4-205ENST00000396819 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
LTBP4-205ENST00000396819 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
LTBP4-205ENST00000396819 SPRR2DP22532 72 aa5.99□□□□□ -1.45
LTBP4-205ENST00000396819 MT1GP13640 62 aa5.95□□□□□ -1.46
LTBP4-205ENST00000396819 MUC2Q02817 5179 aa5.94□□□□□ -1.46
LTBP4-205ENST00000396819 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
LTBP4-205ENST00000396819 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
LTBP4-205ENST00000396819 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
LTBP4-205ENST00000396819 KRTAP9-6A0A140TA67 174 aa5.76□□□□□ -1.49
LTBP4-205ENST00000396819 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms