RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 DNAH5Q8TE73 4624 aa7.24□□□□□ -1.25
CYTH3-202ENST00000396741 HECTD4Q9Y4D8 3996 aa7.23□□□□□ -1.25
CYTH3-202ENST00000396741 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
CYTH3-202ENST00000396741 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
CYTH3-202ENST00000396741 DNAH2Q9P225 4427 aa7.22□□□□□ -1.25
CYTH3-202ENST00000396741 DNAH17Q9UFH2 4485 aa7.22□□□□□ -1.25
CYTH3-202ENST00000396741 STARD9Q9P2P6 4700 aa7.2□□□□□ -1.26
CYTH3-202ENST00000396741 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
CYTH3-202ENST00000396741 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
CYTH3-202ENST00000396741 KRTAP10-6P60371 365 aaPredicted RBP7.18□□□□□ -1.26
CYTH3-202ENST00000396741 DNAH8Q96JB1 4490 aa7.17□□□□□ -1.26
CYTH3-202ENST00000396741 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
CYTH3-202ENST00000396741 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
CYTH3-202ENST00000396741 FAT1Q14517 4588 aa7.15□□□□□ -1.27
CYTH3-202ENST00000396741 KRTAP12-1P59990 96 aa7.15□□□□□ -1.27
CYTH3-202ENST00000396741 KRTAP4-5Q9BYR2 181 aa7.1□□□□□ -1.27
CYTH3-202ENST00000396741 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
CYTH3-202ENST00000396741 LRP1BQ9NZR2 4599 aa7.02□□□□□ -1.29
CYTH3-202ENST00000396741 PKD1P98161 4303 aa7.01□□□□□ -1.29
CYTH3-202ENST00000396741 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
CYTH3-202ENST00000396741 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
CYTH3-202ENST00000396741 FAT2Q9NYQ8 4349 aa6.97□□□□□ -1.29
CYTH3-202ENST00000396741 DYNC1H1Q14204 4646 aaKnown RBP6.94□□□□□ -1.3
CYTH3-202ENST00000396741 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
CYTH3-202ENST00000396741 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.3
CYTH3-202ENST00000396741 RYR1P21817 5038 aa6.88□□□□□ -1.31
CYTH3-202ENST00000396741 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
CYTH3-202ENST00000396741 SACSQ9NZJ4 4579 aa6.84□□□□□ -1.31
CYTH3-202ENST00000396741 KIAA1109Q2LD37 5005 aa6.82□□□□□ -1.32
CYTH3-202ENST00000396741 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
CYTH3-202ENST00000396741 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
CYTH3-202ENST00000396741 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
CYTH3-202ENST00000396741 VPS13BQ7Z7G8 4022 aa6.72□□□□□ -1.33
CYTH3-202ENST00000396741 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
CYTH3-202ENST00000396741 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.33
CYTH3-202ENST00000396741 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
CYTH3-202ENST00000396741 INE1O15225 51 aa6.66□□□□□ -1.34
CYTH3-202ENST00000396741 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.35
CYTH3-202ENST00000396741 RYR3Q15413 4870 aa6.62□□□□□ -1.35
CYTH3-202ENST00000396741 RYR2Q92736 4967 aa6.59□□□□□ -1.36
CYTH3-202ENST00000396741 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
CYTH3-202ENST00000396741 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
CYTH3-202ENST00000396741 TNXBP22105 4242 aa6.43□□□□□ -1.38
CYTH3-202ENST00000396741 HSPG2P98160 4391 aa6.42□□□□□ -1.38
CYTH3-202ENST00000396741 LRP2P98164 4655 aa6.4□□□□□ -1.38
CYTH3-202ENST00000396741 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
CYTH3-202ENST00000396741 KMT2CQ8NEZ4 4911 aaKnown RBP6.29□□□□□ -1.4
CYTH3-202ENST00000396741 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
CYTH3-202ENST00000396741 HERC2O95714 4834 aa6.25□□□□□ -1.41
CYTH3-202ENST00000396741 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
CYTH3-202ENST00000396741 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
CYTH3-202ENST00000396741 MT1HP80294 61 aa6.11□□□□□ -1.43
CYTH3-202ENST00000396741 LPAP08519 4548 aa6.08□□□□□ -1.44
CYTH3-202ENST00000396741 MT2AP02795 61 aa6.06□□□□□ -1.44
CYTH3-202ENST00000396741 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
CYTH3-202ENST00000396741 MT1FP04733 61 aa6.02□□□□□ -1.45
CYTH3-202ENST00000396741 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.45
CYTH3-202ENST00000396741 PCLOQ9Y6V0 5065 aa5.95□□□□□ -1.46
CYTH3-202ENST00000396741 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
CYTH3-202ENST00000396741 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
CYTH3-202ENST00000396741 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
CYTH3-202ENST00000396741 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
CYTH3-202ENST00000396741 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
CYTH3-202ENST00000396741 HERC1Q15751 4861 aa5.75□□□□□ -1.49
CYTH3-202ENST00000396741 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
CYTH3-202ENST00000396741 MUC2Q02817 5179 aa5.7□□□□□ -1.5
CYTH3-202ENST00000396741 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
CYTH3-202ENST00000396741 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
CYTH3-202ENST00000396741 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
CYTH3-202ENST00000396741 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
CYTH3-202ENST00000396741 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.51
CYTH3-202ENST00000396741 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.51
CYTH3-202ENST00000396741 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
CYTH3-202ENST00000396741 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
CYTH3-202ENST00000396741 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
CYTH3-202ENST00000396741 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
CYTH3-202ENST00000396741 MT1BP07438 61 aa5.56□□□□□ -1.52
CYTH3-202ENST00000396741 MT1XP80297 61 aa5.56□□□□□ -1.52
CYTH3-202ENST00000396741 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
CYTH3-202ENST00000396741 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
CYTH3-202ENST00000396741 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
CYTH3-202ENST00000396741 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
CYTH3-202ENST00000396741 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
CYTH3-202ENST00000396741 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
CYTH3-202ENST00000396741 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.55
CYTH3-202ENST00000396741 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
CYTH3-202ENST00000396741 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
CYTH3-202ENST00000396741 LCE2BO14633 110 aa5.28□□□□□ -1.56
CYTH3-202ENST00000396741 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
CYTH3-202ENST00000396741 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
CYTH3-202ENST00000396741 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
CYTH3-202ENST00000396741 MT1GP13640 62 aa5.14□□□□□ -1.59
CYTH3-202ENST00000396741 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
CYTH3-202ENST00000396741 USH2AO75445 5202 aa5.01□□□□□ -1.61
CYTH3-202ENST00000396741 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.61
CYTH3-202ENST00000396741 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
CYTH3-202ENST00000396741 MT1LQ93083 61 aa4.94□□□□□ -1.62
CYTH3-202ENST00000396741 FCGBPQ9Y6R7 5405 aaPredicted RBP4.94□□□□□ -1.62
CYTH3-202ENST00000396741 MT1EP04732 61 aa4.91□□□□□ -1.62
CYTH3-202ENST00000396741 SPRR2EP22531 72 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms