RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
CYTH3-202ENST00000396741 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
CYTH3-202ENST00000396741 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.65
CYTH3-202ENST00000396741 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
CYTH3-202ENST00000396741 EHMT2Q96KQ7 1210 aa24.41■■□□□ 1.5
CYTH3-202ENST00000396741 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
CYTH3-202ENST00000396741 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
CYTH3-202ENST00000396741 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
CYTH3-202ENST00000396741 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
CYTH3-202ENST00000396741 RANGAP1P46060 587 aaPredicted RBP23.17■■□□□ 1.3
CYTH3-202ENST00000396741 PPARGC1BQ86YN6 1023 aaKnown RBP23.07■■□□□ 1.28
CYTH3-202ENST00000396741 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
CYTH3-202ENST00000396741 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
CYTH3-202ENST00000396741 APLP2Q06481 763 aa23.04■■□□□ 1.28
CYTH3-202ENST00000396741 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
CYTH3-202ENST00000396741 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
CYTH3-202ENST00000396741 HRCP23327 699 aa22.63■■□□□ 1.21
CYTH3-202ENST00000396741 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
CYTH3-202ENST00000396741 ZEB1P37275 1124 aaPredicted RBP22.57■■□□□ 1.2
CYTH3-202ENST00000396741 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
CYTH3-202ENST00000396741 ATP1B4Q9UN42 357 aaPredicted RBP22.57■■□□□ 1.2
CYTH3-202ENST00000396741 ABCC9O60706 1549 aa22.4■■□□□ 1.18
CYTH3-202ENST00000396741 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.17
CYTH3-202ENST00000396741 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
CYTH3-202ENST00000396741 MYT1Q01538 1121 aa22.27■■□□□ 1.16
CYTH3-202ENST00000396741 CENPBP07199 599 aaPredicted RBP22.25■■□□□ 1.15
CYTH3-202ENST00000396741 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
CYTH3-202ENST00000396741 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
CYTH3-202ENST00000396741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
CYTH3-202ENST00000396741 ITGAEP38570 1179 aa22.19■■□□□ 1.14
CYTH3-202ENST00000396741 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
CYTH3-202ENST00000396741 DIEXFQ68CQ4 756 aaKnown RBP21.72■■□□□ 1.07
CYTH3-202ENST00000396741 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
CYTH3-202ENST00000396741 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.06
CYTH3-202ENST00000396741 CNGB1Q14028 1251 aaPredicted RBP21.61■■□□□ 1.05
CYTH3-202ENST00000396741 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
CYTH3-202ENST00000396741 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.04
CYTH3-202ENST00000396741 NEFLP07196 543 aa21.54■■□□□ 1.04
CYTH3-202ENST00000396741 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
CYTH3-202ENST00000396741 POLR3GLQ9BT43 218 aa21.53■■□□□ 1.04
CYTH3-202ENST00000396741 NEUROD1Q13562 356 aa21.43■■□□□ 1.02
CYTH3-202ENST00000396741 P3H3Q8IVL6 736 aa21.43■■□□□ 1.02
CYTH3-202ENST00000396741 ERICH6Q7L0X2 663 aa21.38■■□□□ 1.01
CYTH3-202ENST00000396741 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1
CYTH3-202ENST00000396741 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
CYTH3-202ENST00000396741 ARID3CA6NKF2 412 aa21.27■■□□□ 1
CYTH3-202ENST00000396741 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
CYTH3-202ENST00000396741 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
CYTH3-202ENST00000396741 TRIM52Q96A61 297 aa21.22■□□□□ 0.99
CYTH3-202ENST00000396741 BCANQ96GW7 911 aa21.13■□□□□ 0.97
CYTH3-202ENST00000396741 FBLN2P98095 1184 aa21.11■□□□□ 0.97
CYTH3-202ENST00000396741 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
CYTH3-202ENST00000396741 ZNF326Q5BKZ1 582 aaKnown RBP21.04■□□□□ 0.96
CYTH3-202ENST00000396741 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.96
CYTH3-202ENST00000396741 ANP32CO43423 234 aa20.88■□□□□ 0.93
CYTH3-202ENST00000396741 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
CYTH3-202ENST00000396741 CLIP1P30622 1438 aa20.83■□□□□ 0.93
CYTH3-202ENST00000396741 ZNF777Q9ULD5 760 aaPredicted RBP20.83■□□□□ 0.92
CYTH3-202ENST00000396741 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
CYTH3-202ENST00000396741 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
CYTH3-202ENST00000396741 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
CYTH3-202ENST00000396741 MIER1Q8N108 512 aa20.79■□□□□ 0.92
CYTH3-202ENST00000396741 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
CYTH3-202ENST00000396741 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
CYTH3-202ENST00000396741 CHIC2Q9UKJ5 165 aa20.77■□□□□ 0.92
CYTH3-202ENST00000396741 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
CYTH3-202ENST00000396741 NACADO15069 1562 aa20.73■□□□□ 0.91
CYTH3-202ENST00000396741 SOGA1O94964 1423 aa20.69■□□□□ 0.9
CYTH3-202ENST00000396741 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
CYTH3-202ENST00000396741 GOLGA3Q08378 1498 aa20.63■□□□□ 0.89
CYTH3-202ENST00000396741 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
CYTH3-202ENST00000396741 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
CYTH3-202ENST00000396741 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
CYTH3-202ENST00000396741 FKBP8Q14318 412 aa20.56■□□□□ 0.88
CYTH3-202ENST00000396741 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
CYTH3-202ENST00000396741 DAXXQ9UER7 740 aaPredicted RBP20.56■□□□□ 0.88
CYTH3-202ENST00000396741 EEA1Q15075 1411 aa20.55■□□□□ 0.88
CYTH3-202ENST00000396741 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
CYTH3-202ENST00000396741 HNRNPUQ00839 825 aaKnown RBP eCLIP20.51■□□□□ 0.87
CYTH3-202ENST00000396741 MTUS2Q5JR59 1369 aa20.51■□□□□ 0.87
CYTH3-202ENST00000396741 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
CYTH3-202ENST00000396741 CDK11AQ9UQ88 783 aaPredicted RBP20.51■□□□□ 0.87
CYTH3-202ENST00000396741 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
CYTH3-202ENST00000396741 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
CYTH3-202ENST00000396741 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
CYTH3-202ENST00000396741 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
CYTH3-202ENST00000396741 SIN3AQ96ST3 1273 aa20.43■□□□□ 0.86
CYTH3-202ENST00000396741 SALL2Q9Y467 1007 aaPredicted RBP20.43■□□□□ 0.86
CYTH3-202ENST00000396741 SENP3-EIF4A1A0A087X0R7 540 aa20.39■□□□□ 0.85
CYTH3-202ENST00000396741 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
CYTH3-202ENST00000396741 WIZO95785 1651 aa20.38■□□□□ 0.85
CYTH3-202ENST00000396741 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
CYTH3-202ENST00000396741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
CYTH3-202ENST00000396741 KDM2AQ9Y2K7 1162 aa20.37■□□□□ 0.85
CYTH3-202ENST00000396741 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
CYTH3-202ENST00000396741 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
CYTH3-202ENST00000396741 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
CYTH3-202ENST00000396741 BCL11AQ9H165 835 aa20.27■□□□□ 0.84
CYTH3-202ENST00000396741 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
CYTH3-202ENST00000396741 CHGAP10645 457 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms