RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 CSMD3Q7Z407 3707 aa2.73□□□□□ -1.97
A1CF-206ENST00000395489 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
A1CF-206ENST00000395489 HECTD4Q9Y4D8 3996 aa2.71□□□□□ -1.97
A1CF-206ENST00000395489 DNAH7Q8WXX0 4024 aa2.66□□□□□ -1.98
A1CF-206ENST00000395489 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
A1CF-206ENST00000395489 A0A1B0GVY2 172 aa2.63□□□□□ -1.99
A1CF-206ENST00000395489 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
A1CF-206ENST00000395489 KMT2AQ03164 3969 aa2.6□□□□□ -1.99
A1CF-206ENST00000395489 DNAH6Q9C0G6 4158 aa2.58□□□□□ -2
A1CF-206ENST00000395489 KRTAP17-1Q9BYP8 105 aa2.53□□□□□ -2
A1CF-206ENST00000395489 SPRR2GQ9BYE4 73 aa2.52□□□□□ -2.01
A1CF-206ENST00000395489 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
A1CF-206ENST00000395489 PRKDCP78527 4128 aaKnown RBP2.5□□□□□ -2.01
A1CF-206ENST00000395489 KRTAP10-4P60372 401 aaPredicted RBP2.48□□□□□ -2.01
A1CF-206ENST00000395489 FRAS1Q86XX4 4008 aa2.44□□□□□ -2.02
A1CF-206ENST00000395489 DNAH2Q9P225 4427 aa2.44□□□□□ -2.02
A1CF-206ENST00000395489 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
A1CF-206ENST00000395489 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
A1CF-206ENST00000395489 HUWE1Q7Z6Z7 4374 aaKnown RBP2.41□□□□□ -2.02
A1CF-206ENST00000395489 FLGP20930 4061 aaPredicted RBP2.4□□□□□ -2.02
A1CF-206ENST00000395489 LORP23490 312 aaPredicted RBP2.4□□□□□ -2.02
A1CF-206ENST00000395489 VPS13BQ7Z7G8 4022 aa2.4□□□□□ -2.02
A1CF-206ENST00000395489 DNAH10Q8IVF4 4471 aa2.4□□□□□ -2.02
A1CF-206ENST00000395489 MT1HL1P0DM35 61 aa2.4□□□□□ -2.03
A1CF-206ENST00000395489 LCE2CQ5TA81 110 aa2.36□□□□□ -2.03
A1CF-206ENST00000395489 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
A1CF-206ENST00000395489 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
A1CF-206ENST00000395489 ANK3Q12955 4377 aaKnown RBP2.28□□□□□ -2.04
A1CF-206ENST00000395489 KRTAP19-8Q3LI54 63 aa2.26□□□□□ -2.05
A1CF-206ENST00000395489 KRTAP19-5Q3LI72 72 aa2.25□□□□□ -2.05
A1CF-206ENST00000395489 RYR1P21817 5038 aa2.24□□□□□ -2.05
A1CF-206ENST00000395489 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
A1CF-206ENST00000395489 LCE2DQ5TA82 110 aaPredicted RBP2.22□□□□□ -2.05
A1CF-206ENST00000395489 RYR3Q15413 4870 aa2.22□□□□□ -2.05
A1CF-206ENST00000395489 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
A1CF-206ENST00000395489 DYNC2H1Q8NCM8 4307 aaKnown RBP2.22□□□□□ -2.05
A1CF-206ENST00000395489 DNHD1Q96M86 4753 aa2.22□□□□□ -2.05
A1CF-206ENST00000395489 LCE2BO14633 110 aa2.22□□□□□ -2.05
A1CF-206ENST00000395489 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
A1CF-206ENST00000395489 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
A1CF-206ENST00000395489 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
A1CF-206ENST00000395489 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
A1CF-206ENST00000395489 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
A1CF-206ENST00000395489 DNAH17Q9UFH2 4485 aa2.19□□□□□ -2.06
A1CF-206ENST00000395489 KRTAP10-7P60409 375 aaPredicted RBP2.15□□□□□ -2.06
A1CF-206ENST00000395489 MT1LQ93083 61 aa2.14□□□□□ -2.07
A1CF-206ENST00000395489 HSPG2P98160 4391 aa2.14□□□□□ -2.07
A1CF-206ENST00000395489 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
A1CF-206ENST00000395489 PCLOQ9Y6V0 5065 aa2.14□□□□□ -2.07
A1CF-206ENST00000395489 KRTAP19-1Q8IUB9 90 aa2.13□□□□□ -2.07
A1CF-206ENST00000395489 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
A1CF-206ENST00000395489 PKD1P98161 4303 aa2.12□□□□□ -2.07
A1CF-206ENST00000395489 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
A1CF-206ENST00000395489 LRP1Q07954 4544 aaKnown RBP2.12□□□□□ -2.07
A1CF-206ENST00000395489 MT1XP80297 61 aa2.11□□□□□ -2.07
A1CF-206ENST00000395489 MT2AP02795 61 aa2.11□□□□□ -2.07
A1CF-206ENST00000395489 MT1EP04732 61 aa2.1□□□□□ -2.07
A1CF-206ENST00000395489 FAT3Q8TDW7 4589 aa2.1□□□□□ -2.07
A1CF-206ENST00000395489 SPRR2AP35326 72 aa2.09□□□□□ -2.07
A1CF-206ENST00000395489 MT1AP04731 61 aa2.09□□□□□ -2.08
A1CF-206ENST00000395489 DNAH9Q9NYC9 4486 aa2.08□□□□□ -2.08
A1CF-206ENST00000395489 FAT2Q9NYQ8 4349 aa2.08□□□□□ -2.08
A1CF-206ENST00000395489 MT1GP13640 62 aa2.07□□□□□ -2.08
A1CF-206ENST00000395489 SPRR2BP35325 72 aa2.07□□□□□ -2.08
A1CF-206ENST00000395489 DYNC1H1Q14204 4646 aaKnown RBP2.06□□□□□ -2.08
A1CF-206ENST00000395489 HYDINQ4G0P3 5121 aa2.06□□□□□ -2.08
A1CF-206ENST00000395489 LCE2AQ5TA79 106 aaPredicted RBP2.06□□□□□ -2.08
A1CF-206ENST00000395489 MT1HP80294 61 aa2.04□□□□□ -2.08
A1CF-206ENST00000395489 PKHD1L1Q86WI1 4243 aa2.04□□□□□ -2.08
A1CF-206ENST00000395489 PRM1P04553 51 aa2.03□□□□□ -2.09
A1CF-206ENST00000395489 MT1FP04733 61 aa2.01□□□□□ -2.09
A1CF-206ENST00000395489 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
A1CF-206ENST00000395489 LCE3BQ5TA77 95 aa2□□□□□ -2.09
A1CF-206ENST00000395489 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
A1CF-206ENST00000395489 DNAH5Q8TE73 4624 aa1.98□□□□□ -2.09
A1CF-206ENST00000395489 STARD9Q9P2P6 4700 aa1.97□□□□□ -2.09
A1CF-206ENST00000395489 KRTAP4-5Q9BYR2 181 aa1.97□□□□□ -2.09
A1CF-206ENST00000395489 RYR2Q92736 4967 aa1.96□□□□□ -2.09
A1CF-206ENST00000395489 MT1BP07438 61 aa1.94□□□□□ -2.1
A1CF-206ENST00000395489 TNXBP22105 4242 aa1.93□□□□□ -2.1
A1CF-206ENST00000395489 SPRR2DP22532 72 aa1.93□□□□□ -2.1
A1CF-206ENST00000395489 EPPK1P58107 5090 aaKnown RBP1.92□□□□□ -2.1
A1CF-206ENST00000395489 PLECQ15149 4684 aaKnown RBP1.92□□□□□ -2.1
A1CF-206ENST00000395489 SACSQ9NZJ4 4579 aa1.91□□□□□ -2.1
A1CF-206ENST00000395489 MYCBP2O75592 4640 aa1.91□□□□□ -2.1
A1CF-206ENST00000395489 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
A1CF-206ENST00000395489 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
A1CF-206ENST00000395489 MT1MQ8N339 61 aa1.88□□□□□ -2.11
A1CF-206ENST00000395489 KMT2CQ8NEZ4 4911 aaKnown RBP1.86□□□□□ -2.11
A1CF-206ENST00000395489 SPRR2EP22531 72 aa1.86□□□□□ -2.11
A1CF-206ENST00000395489 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
A1CF-206ENST00000395489 KRTAP9-8Q9BYQ0 159 aa1.84□□□□□ -2.12
A1CF-206ENST00000395489 KIAA1109Q2LD37 5005 aa1.82□□□□□ -2.12
A1CF-206ENST00000395489 KRTAP9-3Q9BYQ3 159 aa1.81□□□□□ -2.12
A1CF-206ENST00000395489 KRTAP2-2Q9BYT5 123 aa1.81□□□□□ -2.12
A1CF-206ENST00000395489 KRTAP9-6A0A140TA67 174 aa1.8□□□□□ -2.12
A1CF-206ENST00000395489 KRTAP19-2Q3LHN2 52 aa1.8□□□□□ -2.12
A1CF-206ENST00000395489 LRP1BQ9NZR2 4599 aa1.79□□□□□ -2.12
A1CF-206ENST00000395489 MUC17Q685J3 4493 aa1.79□□□□□ -2.12
A1CF-206ENST00000395489 KRTAP9-2Q9BYQ4 174 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms