RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 FAT1Q14517 4588 aa1.76□□□□□ -2.13
A1CF-206ENST00000395489 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
A1CF-206ENST00000395489 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
A1CF-206ENST00000395489 HERC2O95714 4834 aa1.75□□□□□ -2.13
A1CF-206ENST00000395489 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
A1CF-206ENST00000395489 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
A1CF-206ENST00000395489 HERC1Q15751 4861 aa1.74□□□□□ -2.13
A1CF-206ENST00000395489 KRTAP9-6A8MVA2 160 aa1.73□□□□□ -2.13
A1CF-206ENST00000395489 LCE4AQ5TA78 99 aa1.72□□□□□ -2.13
A1CF-206ENST00000395489 KRTAP4-8A0A0G2JLE6 195 aa1.66□□□□□ -2.14
A1CF-206ENST00000395489 KRTAP4-8Q9BYQ9 185 aa1.66□□□□□ -2.14
A1CF-206ENST00000395489 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.14
A1CF-206ENST00000395489 LCE1AQ5T7P2 110 aa1.65□□□□□ -2.15
A1CF-206ENST00000395489 KRTAP4-7Q9BYR0 210 aa1.64□□□□□ -2.15
A1CF-206ENST00000395489 KRTAP9-7A8MTY7 169 aa1.63□□□□□ -2.15
A1CF-206ENST00000395489 KRTAP19-6Q3LI70 58 aa1.62□□□□□ -2.15
A1CF-206ENST00000395489 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
A1CF-206ENST00000395489 SYNE1Q8NF91 8797 aaKnown RBP1.6□□□□□ -2.15
A1CF-206ENST00000395489 LRP2P98164 4655 aa1.6□□□□□ -2.15
A1CF-206ENST00000395489 LCE1FQ5T754 118 aa1.59□□□□□ -2.15
A1CF-206ENST00000395489 LCE5AQ5TCM9 118 aa1.59□□□□□ -2.16
A1CF-206ENST00000395489 LPAP08519 4548 aa1.59□□□□□ -2.16
A1CF-206ENST00000395489 KRTAP9-4Q9BYQ2 154 aa1.58□□□□□ -2.16
A1CF-206ENST00000395489 LOC100996750A0A140TA64 210 aa1.56□□□□□ -2.16
A1CF-206ENST00000395489 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
A1CF-206ENST00000395489 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
A1CF-206ENST00000395489 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
A1CF-206ENST00000395489 LCE1EQ5T753 118 aa1.51□□□□□ -2.17
A1CF-206ENST00000395489 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
A1CF-206ENST00000395489 KRTAP4-6Q9BYQ5 205 aa1.49□□□□□ -2.17
A1CF-206ENST00000395489 LCE1DQ5T752 114 aa1.49□□□□□ -2.17
A1CF-206ENST00000395489 KRTAP4-9Q9BYQ8 210 aa1.48□□□□□ -2.17
A1CF-206ENST00000395489 KRTAP5-5Q701N2 237 aaPredicted RBP1.46□□□□□ -2.18
A1CF-206ENST00000395489 KRTAP20-1Q3LI63 56 aa1.46□□□□□ -2.18
A1CF-206ENST00000395489 MUC2Q02817 5179 aa1.46□□□□□ -2.18
A1CF-206ENST00000395489 KRTAP5-3Q6L8H2 238 aa1.46□□□□□ -2.18
A1CF-206ENST00000395489 USH2AO75445 5202 aa1.44□□□□□ -2.18
A1CF-206ENST00000395489 KRTAP4-3Q9BYR4 195 aa1.42□□□□□ -2.18
A1CF-206ENST00000395489 KRTAP9-9Q9BYP9 154 aa1.42□□□□□ -2.18
A1CF-206ENST00000395489 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
A1CF-206ENST00000395489 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.41□□□□□ -2.18
A1CF-206ENST00000395489 MT4P47944 62 aa1.34□□□□□ -2.19
A1CF-206ENST00000395489 KMT2DO14686 5537 aa1.32□□□□□ -2.2
A1CF-206ENST00000395489 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
A1CF-206ENST00000395489 KRTAP5-2Q701N4 177 aa1.31□□□□□ -2.2
A1CF-206ENST00000395489 KRTAP4-11Q9BYQ6 195 aa1.31□□□□□ -2.2
A1CF-206ENST00000395489 KRTAP4-2Q9BYR5 136 aa1.3□□□□□ -2.2
A1CF-206ENST00000395489 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
A1CF-206ENST00000395489 SYNE2Q8WXH0 6885 aaKnown RBP1.23□□□□□ -2.21
A1CF-206ENST00000395489 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
A1CF-206ENST00000395489 KRTAP5-9P26371 169 aa1.2□□□□□ -2.22
A1CF-206ENST00000395489 FCGBPQ9Y6R7 5405 aaPredicted RBP1.18□□□□□ -2.22
A1CF-206ENST00000395489 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
A1CF-206ENST00000395489 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.22
A1CF-206ENST00000395489 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
A1CF-206ENST00000395489 FSIP2Q5CZC0 6907 aa1.14□□□□□ -2.23
A1CF-206ENST00000395489 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
A1CF-206ENST00000395489 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
A1CF-206ENST00000395489 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
A1CF-206ENST00000395489 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
A1CF-206ENST00000395489 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
A1CF-206ENST00000395489 KRTAP5-4Q6L8H1 288 aa1.09□□□□□ -2.24
A1CF-206ENST00000395489 KRTAP4-4Q9BYR3 166 aa1.05□□□□□ -2.24
A1CF-206ENST00000395489 KRTAP4-12Q9BQ66 201 aa1.03□□□□□ -2.24
A1CF-206ENST00000395489 MACF1Q9UPN3 7388 aaKnown RBP1.03□□□□□ -2.24
A1CF-206ENST00000395489 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
A1CF-206ENST00000395489 KRTAP5-1Q6L8H4 278 aa1□□□□□ -2.25
A1CF-206ENST00000395489 GPR98Q8WXG9 6306 aa0.99□□□□□ -2.25
A1CF-206ENST00000395489 MUC19Q7Z5P9 8384 aa0.99□□□□□ -2.25
A1CF-206ENST00000395489 NEBP20929 6669 aa0.98□□□□□ -2.25
A1CF-206ENST00000395489 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
A1CF-206ENST00000395489 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
A1CF-206ENST00000395489 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
A1CF-206ENST00000395489 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
A1CF-206ENST00000395489 KRTAP5-7Q6L8G8 165 aa0.82□□□□□ -2.28
A1CF-206ENST00000395489 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
A1CF-206ENST00000395489 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms