RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 DNHD1Q96M86 4753 aa6.28□□□□□ -1.4
SLC28A1-203ENST00000394573 FAT2Q9NYQ8 4349 aa6.27□□□□□ -1.41
SLC28A1-203ENST00000394573 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
SLC28A1-203ENST00000394573 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
SLC28A1-203ENST00000394573 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
SLC28A1-203ENST00000394573 PKHD1P08F94 4074 aa6.18□□□□□ -1.42
SLC28A1-203ENST00000394573 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
SLC28A1-203ENST00000394573 KRTAP10-1P60331 282 aa6.12□□□□□ -1.43
SLC28A1-203ENST00000394573 MYCBP2O75592 4640 aa6.06□□□□□ -1.44
SLC28A1-203ENST00000394573 HSPG2P98160 4391 aa6.05□□□□□ -1.44
SLC28A1-203ENST00000394573 PKD1P98161 4303 aa6.01□□□□□ -1.45
SLC28A1-203ENST00000394573 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
SLC28A1-203ENST00000394573 M0QZ58 72 aa5.96□□□□□ -1.45
SLC28A1-203ENST00000394573 FAT1Q14517 4588 aa5.96□□□□□ -1.45
SLC28A1-203ENST00000394573 SACSQ9NZJ4 4579 aa5.96□□□□□ -1.46
SLC28A1-203ENST00000394573 SMR3BP02814 79 aaPredicted RBP5.94□□□□□ -1.46
SLC28A1-203ENST00000394573 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
SLC28A1-203ENST00000394573 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
SLC28A1-203ENST00000394573 KRTAP21-3Q3LHN1 58 aa5.91□□□□□ -1.46
SLC28A1-203ENST00000394573 HYDINQ4G0P3 5121 aa5.9□□□□□ -1.47
SLC28A1-203ENST00000394573 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
SLC28A1-203ENST00000394573 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
SLC28A1-203ENST00000394573 LPAP08519 4548 aa5.87□□□□□ -1.47
SLC28A1-203ENST00000394573 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
SLC28A1-203ENST00000394573 R4GN34 69 aa5.85□□□□□ -1.47
SLC28A1-203ENST00000394573 J3QL48 77 aa5.81□□□□□ -1.48
SLC28A1-203ENST00000394573 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
SLC28A1-203ENST00000394573 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
SLC28A1-203ENST00000394573 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
SLC28A1-203ENST00000394573 TNXBP22105 4242 aa5.66□□□□□ -1.5
SLC28A1-203ENST00000394573 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
SLC28A1-203ENST00000394573 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
SLC28A1-203ENST00000394573 LRP2P98164 4655 aa5.61□□□□□ -1.51
SLC28A1-203ENST00000394573 RYR2Q92736 4967 aa5.54□□□□□ -1.52
SLC28A1-203ENST00000394573 INE1O15225 51 aa5.53□□□□□ -1.52
SLC28A1-203ENST00000394573 KRTAP10-4P60372 401 aaPredicted RBP5.53□□□□□ -1.52
SLC28A1-203ENST00000394573 RYR3Q15413 4870 aa5.49□□□□□ -1.53
SLC28A1-203ENST00000394573 TNP1P09430 55 aa5.44□□□□□ -1.54
SLC28A1-203ENST00000394573 A0A1B0GVY2 172 aa5.4□□□□□ -1.55
SLC28A1-203ENST00000394573 RYR1P21817 5038 aa5.34□□□□□ -1.56
SLC28A1-203ENST00000394573 EPPK1P58107 5090 aaKnown RBP5.31□□□□□ -1.56
SLC28A1-203ENST00000394573 KIAA1109Q2LD37 5005 aa5.28□□□□□ -1.56
SLC28A1-203ENST00000394573 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
SLC28A1-203ENST00000394573 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.57
SLC28A1-203ENST00000394573 Q5VSD8 79 aa5.21□□□□□ -1.58
SLC28A1-203ENST00000394573 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
SLC28A1-203ENST00000394573 MUC17Q685J3 4493 aa5.15□□□□□ -1.59
SLC28A1-203ENST00000394573 ABCA13Q86UQ4 5058 aa5.12□□□□□ -1.59
SLC28A1-203ENST00000394573 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.59
SLC28A1-203ENST00000394573 MUC2Q02817 5179 aa5.08□□□□□ -1.6
SLC28A1-203ENST00000394573 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
SLC28A1-203ENST00000394573 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
SLC28A1-203ENST00000394573 FLGP20930 4061 aaPredicted RBP5.01□□□□□ -1.61
SLC28A1-203ENST00000394573 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
SLC28A1-203ENST00000394573 HERC2O95714 4834 aa4.94□□□□□ -1.62
SLC28A1-203ENST00000394573 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
SLC28A1-203ENST00000394573 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
SLC28A1-203ENST00000394573 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
SLC28A1-203ENST00000394573 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
SLC28A1-203ENST00000394573 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
SLC28A1-203ENST00000394573 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
SLC28A1-203ENST00000394573 HERC1Q15751 4861 aa4.81□□□□□ -1.64
SLC28A1-203ENST00000394573 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
SLC28A1-203ENST00000394573 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
SLC28A1-203ENST00000394573 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.66
SLC28A1-203ENST00000394573 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
SLC28A1-203ENST00000394573 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
SLC28A1-203ENST00000394573 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
SLC28A1-203ENST00000394573 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
SLC28A1-203ENST00000394573 KMT2DO14686 5537 aa4.54□□□□□ -1.68
SLC28A1-203ENST00000394573 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
SLC28A1-203ENST00000394573 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
SLC28A1-203ENST00000394573 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
SLC28A1-203ENST00000394573 MT1XP80297 61 aa4.49□□□□□ -1.69
SLC28A1-203ENST00000394573 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
SLC28A1-203ENST00000394573 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
SLC28A1-203ENST00000394573 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
SLC28A1-203ENST00000394573 M0R2T5 61 aa4.46□□□□□ -1.7
SLC28A1-203ENST00000394573 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
SLC28A1-203ENST00000394573 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
SLC28A1-203ENST00000394573 MT1FP04733 61 aa4.39□□□□□ -1.71
SLC28A1-203ENST00000394573 MT1BP07438 61 aa4.34□□□□□ -1.72
SLC28A1-203ENST00000394573 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
SLC28A1-203ENST00000394573 MT2AP02795 61 aa4.31□□□□□ -1.72
SLC28A1-203ENST00000394573 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
SLC28A1-203ENST00000394573 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
SLC28A1-203ENST00000394573 USH2AO75445 5202 aa4.22□□□□□ -1.73
SLC28A1-203ENST00000394573 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
SLC28A1-203ENST00000394573 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
SLC28A1-203ENST00000394573 MT1HP80294 61 aa4.19□□□□□ -1.74
SLC28A1-203ENST00000394573 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
SLC28A1-203ENST00000394573 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
SLC28A1-203ENST00000394573 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
SLC28A1-203ENST00000394573 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
SLC28A1-203ENST00000394573 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
SLC28A1-203ENST00000394573 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
SLC28A1-203ENST00000394573 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
SLC28A1-203ENST00000394573 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
SLC28A1-203ENST00000394573 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
SLC28A1-203ENST00000394573 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms