RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 PKD1P98161 4303 aa9.68□□□□□ -0.86
SMARCC2-203ENST00000394023 MYCBP2O75592 4640 aa9.65□□□□□ -0.87
SMARCC2-203ENST00000394023 APOBP04114 4563 aaKnown RBP9.64□□□□□ -0.87
SMARCC2-203ENST00000394023 SEC61BP60468 96 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-203ENST00000394023 LRP1Q07954 4544 aaKnown RBP9.62□□□□□ -0.87
SMARCC2-203ENST00000394023 KMT2CQ8NEZ4 4911 aaKnown RBP9.59□□□□□ -0.87
SMARCC2-203ENST00000394023 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
SMARCC2-203ENST00000394023 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
SMARCC2-203ENST00000394023 RYR2Q92736 4967 aa9.53□□□□□ -0.88
SMARCC2-203ENST00000394023 P0C880 135 aa9.53□□□□□ -0.88
SMARCC2-203ENST00000394023 R4GN34 69 aa9.51□□□□□ -0.89
SMARCC2-203ENST00000394023 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
SMARCC2-203ENST00000394023 M0QZ58 72 aa9.49□□□□□ -0.89
SMARCC2-203ENST00000394023 ROMO1P60602 79 aa9.49□□□□□ -0.89
SMARCC2-203ENST00000394023 RYR3Q15413 4870 aa9.46□□□□□ -0.89
SMARCC2-203ENST00000394023 RYR1P21817 5038 aa9.45□□□□□ -0.9
SMARCC2-203ENST00000394023 KRTAP4-5Q9BYR2 181 aa9.43□□□□□ -0.9
SMARCC2-203ENST00000394023 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
SMARCC2-203ENST00000394023 KRTAP25-1Q3LHN0 102 aa9.37□□□□□ -0.91
SMARCC2-203ENST00000394023 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
SMARCC2-203ENST00000394023 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
SMARCC2-203ENST00000394023 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
SMARCC2-203ENST00000394023 KRTAP13-4Q3LI77 160 aa9.31□□□□□ -0.92
SMARCC2-203ENST00000394023 CAMK2N1Q7Z7J9 78 aa9.26□□□□□ -0.93
SMARCC2-203ENST00000394023 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
SMARCC2-203ENST00000394023 M0R2T5 61 aa9.21□□□□□ -0.94
SMARCC2-203ENST00000394023 HSPG2P98160 4391 aa9.21□□□□□ -0.94
SMARCC2-203ENST00000394023 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
SMARCC2-203ENST00000394023 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
SMARCC2-203ENST00000394023 LRP2P98164 4655 aa9.09□□□□□ -0.95
SMARCC2-203ENST00000394023 PKHD1L1Q86WI1 4243 aa9.09□□□□□ -0.95
SMARCC2-203ENST00000394023 KRTAP12-1P59990 96 aa9.01□□□□□ -0.97
SMARCC2-203ENST00000394023 EPPK1P58107 5090 aaKnown RBP8.98□□□□□ -0.97
SMARCC2-203ENST00000394023 TNXBP22105 4242 aa8.96□□□□□ -0.97
SMARCC2-203ENST00000394023 LPAP08519 4548 aa8.9□□□□□ -0.99
SMARCC2-203ENST00000394023 HERC2O95714 4834 aa8.83□□□□□ -1
SMARCC2-203ENST00000394023 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
SMARCC2-203ENST00000394023 H3BS24 57 aa8.82□□□□□ -1
SMARCC2-203ENST00000394023 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
SMARCC2-203ENST00000394023 ABCA13Q86UQ4 5058 aa8.72□□□□□ -1.01
SMARCC2-203ENST00000394023 PLAC4Q8WY50 150 aa8.7□□□□□ -1.02
SMARCC2-203ENST00000394023 NDUFAF8A1L188 74 aa8.61□□□□□ -1.03
SMARCC2-203ENST00000394023 KRTAP10-10P60014 251 aa8.55□□□□□ -1.04
SMARCC2-203ENST00000394023 TNP1P09430 55 aa8.55□□□□□ -1.04
SMARCC2-203ENST00000394023 LUZP6Q538Z0 58 aa8.54□□□□□ -1.04
SMARCC2-203ENST00000394023 MUC2Q02817 5179 aa8.42□□□□□ -1.06
SMARCC2-203ENST00000394023 BIRC6Q9NR09 4857 aa8.4□□□□□ -1.06
SMARCC2-203ENST00000394023 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
SMARCC2-203ENST00000394023 HERC1Q15751 4861 aa8.31□□□□□ -1.08
SMARCC2-203ENST00000394023 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
SMARCC2-203ENST00000394023 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
SMARCC2-203ENST00000394023 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
SMARCC2-203ENST00000394023 RNF213Q63HN8 5207 aa8.1□□□□□ -1.11
SMARCC2-203ENST00000394023 MUC17Q685J3 4493 aa8.09□□□□□ -1.11
SMARCC2-203ENST00000394023 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
SMARCC2-203ENST00000394023 MT1HP80294 61 aa8.05□□□□□ -1.12
SMARCC2-203ENST00000394023 FLGP20930 4061 aaPredicted RBP7.98□□□□□ -1.13
SMARCC2-203ENST00000394023 LCE2CQ5TA81 110 aa7.94□□□□□ -1.14
SMARCC2-203ENST00000394023 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
SMARCC2-203ENST00000394023 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
SMARCC2-203ENST00000394023 MT2AP02795 61 aa7.92□□□□□ -1.14
SMARCC2-203ENST00000394023 A0A0A0MQY5 61 aa7.92□□□□□ -1.14
SMARCC2-203ENST00000394023 MT1FP04733 61 aa7.92□□□□□ -1.14
SMARCC2-203ENST00000394023 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
SMARCC2-203ENST00000394023 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
SMARCC2-203ENST00000394023 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
SMARCC2-203ENST00000394023 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
SMARCC2-203ENST00000394023 KRTAP9-8Q9BYQ0 159 aa7.66□□□□□ -1.18
SMARCC2-203ENST00000394023 KRTAP10-12P60413 245 aa7.65□□□□□ -1.18
SMARCC2-203ENST00000394023 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
SMARCC2-203ENST00000394023 KRTAP12-3P60328 96 aa7.52□□□□□ -1.2
SMARCC2-203ENST00000394023 MT1BP07438 61 aa7.46□□□□□ -1.21
SMARCC2-203ENST00000394023 KRTAP19-8Q3LI54 63 aa7.46□□□□□ -1.22
SMARCC2-203ENST00000394023 MT1XP80297 61 aa7.4□□□□□ -1.22
SMARCC2-203ENST00000394023 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
SMARCC2-203ENST00000394023 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
SMARCC2-203ENST00000394023 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
SMARCC2-203ENST00000394023 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
SMARCC2-203ENST00000394023 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
SMARCC2-203ENST00000394023 LCE2BO14633 110 aa7.16□□□□□ -1.26
SMARCC2-203ENST00000394023 USH2AO75445 5202 aa7.15□□□□□ -1.26
SMARCC2-203ENST00000394023 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.27
SMARCC2-203ENST00000394023 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
SMARCC2-203ENST00000394023 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
SMARCC2-203ENST00000394023 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
SMARCC2-203ENST00000394023 KMT2DO14686 5537 aa6.93□□□□□ -1.3
SMARCC2-203ENST00000394023 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
SMARCC2-203ENST00000394023 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
SMARCC2-203ENST00000394023 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
SMARCC2-203ENST00000394023 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
SMARCC2-203ENST00000394023 INE1O15225 51 aa6.64□□□□□ -1.35
SMARCC2-203ENST00000394023 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
SMARCC2-203ENST00000394023 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
SMARCC2-203ENST00000394023 MT1EP04732 61 aa6.46□□□□□ -1.38
SMARCC2-203ENST00000394023 MT1LQ93083 61 aa6.45□□□□□ -1.38
SMARCC2-203ENST00000394023 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
SMARCC2-203ENST00000394023 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
SMARCC2-203ENST00000394023 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
SMARCC2-203ENST00000394023 MT1GP13640 62 aa6.36□□□□□ -1.39
SMARCC2-203ENST00000394023 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms