RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
ERCC2-204ENST00000391945 HYDINQ4G0P3 5121 aa6.64□□□□□ -1.35
ERCC2-204ENST00000391945 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
ERCC2-204ENST00000391945 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
ERCC2-204ENST00000391945 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
ERCC2-204ENST00000391945 M0QZ58 72 aa6.59□□□□□ -1.35
ERCC2-204ENST00000391945 SACSQ9NZJ4 4579 aa6.57□□□□□ -1.36
ERCC2-204ENST00000391945 FRAS1Q86XX4 4008 aa6.55□□□□□ -1.36
ERCC2-204ENST00000391945 H0YAA0 97 aa6.54□□□□□ -1.36
ERCC2-204ENST00000391945 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
ERCC2-204ENST00000391945 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
ERCC2-204ENST00000391945 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
ERCC2-204ENST00000391945 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
ERCC2-204ENST00000391945 RYR1P21817 5038 aa6.5□□□□□ -1.37
ERCC2-204ENST00000391945 PKHD1P08F94 4074 aa6.49□□□□□ -1.37
ERCC2-204ENST00000391945 RYR3Q15413 4870 aa6.49□□□□□ -1.37
ERCC2-204ENST00000391945 FAT2Q9NYQ8 4349 aa6.49□□□□□ -1.37
ERCC2-204ENST00000391945 KMT2CQ8NEZ4 4911 aaKnown RBP6.48□□□□□ -1.37
ERCC2-204ENST00000391945 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
ERCC2-204ENST00000391945 RYR2Q92736 4967 aa6.44□□□□□ -1.38
ERCC2-204ENST00000391945 P0C880 135 aa6.42□□□□□ -1.38
ERCC2-204ENST00000391945 MYCBP2O75592 4640 aa6.41□□□□□ -1.38
ERCC2-204ENST00000391945 LRP1Q07954 4544 aaKnown RBP6.41□□□□□ -1.38
ERCC2-204ENST00000391945 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
ERCC2-204ENST00000391945 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
ERCC2-204ENST00000391945 PKD1P98161 4303 aa6.29□□□□□ -1.4
ERCC2-204ENST00000391945 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
ERCC2-204ENST00000391945 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
ERCC2-204ENST00000391945 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
ERCC2-204ENST00000391945 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
ERCC2-204ENST00000391945 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
ERCC2-204ENST00000391945 HSPG2P98160 4391 aa6.16□□□□□ -1.42
ERCC2-204ENST00000391945 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
ERCC2-204ENST00000391945 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
ERCC2-204ENST00000391945 HERC2O95714 4834 aa6.12□□□□□ -1.43
ERCC2-204ENST00000391945 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
ERCC2-204ENST00000391945 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
ERCC2-204ENST00000391945 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
ERCC2-204ENST00000391945 LRP2P98164 4655 aa6.04□□□□□ -1.44
ERCC2-204ENST00000391945 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
ERCC2-204ENST00000391945 BIRC6Q9NR09 4857 aa5.93□□□□□ -1.46
ERCC2-204ENST00000391945 TNP1P09430 55 aa5.93□□□□□ -1.46
ERCC2-204ENST00000391945 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
ERCC2-204ENST00000391945 LPAP08519 4548 aa5.88□□□□□ -1.47
ERCC2-204ENST00000391945 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
ERCC2-204ENST00000391945 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
ERCC2-204ENST00000391945 TNXBP22105 4242 aa5.82□□□□□ -1.48
ERCC2-204ENST00000391945 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
ERCC2-204ENST00000391945 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
ERCC2-204ENST00000391945 HERC1Q15751 4861 aa5.65□□□□□ -1.5
ERCC2-204ENST00000391945 MT1HP80294 61 aa5.64□□□□□ -1.51
ERCC2-204ENST00000391945 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
ERCC2-204ENST00000391945 PCLOQ9Y6V0 5065 aa5.6□□□□□ -1.51
ERCC2-204ENST00000391945 MUC2Q02817 5179 aa5.55□□□□□ -1.52
ERCC2-204ENST00000391945 MT2AP02795 61 aa5.51□□□□□ -1.53
ERCC2-204ENST00000391945 RNF213Q63HN8 5207 aa5.5□□□□□ -1.53
ERCC2-204ENST00000391945 MT1FP04733 61 aa5.48□□□□□ -1.53
ERCC2-204ENST00000391945 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
ERCC2-204ENST00000391945 UBR4Q5T4S7 5183 aa5.43□□□□□ -1.54
ERCC2-204ENST00000391945 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.54
ERCC2-204ENST00000391945 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
ERCC2-204ENST00000391945 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
ERCC2-204ENST00000391945 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
ERCC2-204ENST00000391945 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
ERCC2-204ENST00000391945 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
ERCC2-204ENST00000391945 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
ERCC2-204ENST00000391945 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
ERCC2-204ENST00000391945 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
ERCC2-204ENST00000391945 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
ERCC2-204ENST00000391945 INE1O15225 51 aa5.16□□□□□ -1.58
ERCC2-204ENST00000391945 KRTAP12-3P60328 96 aa5.15□□□□□ -1.58
ERCC2-204ENST00000391945 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
ERCC2-204ENST00000391945 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
ERCC2-204ENST00000391945 MT1BP07438 61 aa5.1□□□□□ -1.59
ERCC2-204ENST00000391945 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
ERCC2-204ENST00000391945 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
ERCC2-204ENST00000391945 MT1XP80297 61 aa5.02□□□□□ -1.61
ERCC2-204ENST00000391945 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
ERCC2-204ENST00000391945 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
ERCC2-204ENST00000391945 LCE2BO14633 110 aa4.97□□□□□ -1.61
ERCC2-204ENST00000391945 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
ERCC2-204ENST00000391945 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
ERCC2-204ENST00000391945 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
ERCC2-204ENST00000391945 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
ERCC2-204ENST00000391945 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
ERCC2-204ENST00000391945 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
ERCC2-204ENST00000391945 USH2AO75445 5202 aa4.78□□□□□ -1.64
ERCC2-204ENST00000391945 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
ERCC2-204ENST00000391945 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
ERCC2-204ENST00000391945 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
ERCC2-204ENST00000391945 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
ERCC2-204ENST00000391945 KMT2DO14686 5537 aa4.52□□□□□ -1.69
ERCC2-204ENST00000391945 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
ERCC2-204ENST00000391945 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
ERCC2-204ENST00000391945 MT1EP04732 61 aa4.43□□□□□ -1.7
ERCC2-204ENST00000391945 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
ERCC2-204ENST00000391945 MT1LQ93083 61 aa4.4□□□□□ -1.71
ERCC2-204ENST00000391945 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
ERCC2-204ENST00000391945 MT1GP13640 62 aa4.38□□□□□ -1.71
ERCC2-204ENST00000391945 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms