RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 KRTAP1-4P0C5Y4 121 aa1.9□□□□□ -2.11
TRAV39-201ENST00000390466 KRTAP25-1Q3LHN0 102 aa1.9□□□□□ -2.11
TRAV39-201ENST00000390466 SSBP3-AS1Q7Z2R9 100 aa1.9□□□□□ -2.11
TRAV39-201ENST00000390466 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
TRAV39-201ENST00000390466 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
TRAV39-201ENST00000390466 TYMSOSQ8TAI1 123 aa1.89□□□□□ -2.11
TRAV39-201ENST00000390466 KRTAP3-1Q9BYR8 98 aa1.89□□□□□ -2.11
TRAV39-201ENST00000390466 FAT2Q9NYQ8 4349 aa1.89□□□□□ -2.11
TRAV39-201ENST00000390466 VPS13BQ7Z7G8 4022 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 P0C880 135 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 ROMO1P60602 79 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 C1orf134Q5TEV5 83 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 UBE2DNLQ8IWF7 75 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 CIRBP-AS1Q8TBR5 109 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 PKD1P98161 4303 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 TNXBP22105 4242 aa1.88□□□□□ -2.11
TRAV39-201ENST00000390466 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
TRAV39-201ENST00000390466 HYDINQ4G0P3 5121 aa1.87□□□□□ -2.11
TRAV39-201ENST00000390466 KRTAP5-9P26371 169 aa1.87□□□□□ -2.11
TRAV39-201ENST00000390466 BIRC6Q9NR09 4857 aa1.86□□□□□ -2.11
TRAV39-201ENST00000390466 APOBP04114 4563 aaKnown RBP1.86□□□□□ -2.11
TRAV39-201ENST00000390466 H1FX-AS1Q4G0G2 97 aa1.86□□□□□ -2.11
TRAV39-201ENST00000390466 Q8N1X5 172 aa1.86□□□□□ -2.11
TRAV39-201ENST00000390466 RYR2Q92736 4967 aa1.86□□□□□ -2.11
TRAV39-201ENST00000390466 RYR1P21817 5038 aa1.85□□□□□ -2.11
TRAV39-201ENST00000390466 NUPR2A6NF83 97 aa1.84□□□□□ -2.11
TRAV39-201ENST00000390466 KRTAP19-4Q3LI73 84 aa1.84□□□□□ -2.11
TRAV39-201ENST00000390466 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
TRAV39-201ENST00000390466 HSPG2P98160 4391 aa1.83□□□□□ -2.12
TRAV39-201ENST00000390466 PCLOQ9Y6V0 5065 aa1.83□□□□□ -2.12
TRAV39-201ENST00000390466 KRTAP10-2P60368 255 aa1.83□□□□□ -2.12
TRAV39-201ENST00000390466 KRTAP10-6P60371 365 aaPredicted RBP1.83□□□□□ -2.12
TRAV39-201ENST00000390466 TPRXLQ17RH7 258 aa1.83□□□□□ -2.12
TRAV39-201ENST00000390466 C20orf166-AS1Q96NR2 134 aa1.83□□□□□ -2.12
TRAV39-201ENST00000390466 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
TRAV39-201ENST00000390466 A0A1B0GU33 70 aa1.82□□□□□ -2.12
TRAV39-201ENST00000390466 SPINK1P00995 79 aa1.82□□□□□ -2.12
TRAV39-201ENST00000390466 RPS29P62273 56 aaKnown RBP1.82□□□□□ -2.12
TRAV39-201ENST00000390466 KRTAP15-1Q3LI76 137 aa1.82□□□□□ -2.12
TRAV39-201ENST00000390466 KRTAP13-4Q3LI77 160 aa1.82□□□□□ -2.12
TRAV39-201ENST00000390466 COX6B2Q6YFQ2 88 aa1.82□□□□□ -2.12
TRAV39-201ENST00000390466 DYNC1H1Q14204 4646 aaKnown RBP1.82□□□□□ -2.12
TRAV39-201ENST00000390466 KRTAP10-1P60331 282 aa1.81□□□□□ -2.12
TRAV39-201ENST00000390466 FAT1Q14517 4588 aa1.81□□□□□ -2.12
TRAV39-201ENST00000390466 FAT3Q8TDW7 4589 aa1.81□□□□□ -2.12
TRAV39-201ENST00000390466 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
TRAV39-201ENST00000390466 KRTAP10-4P60372 401 aaPredicted RBP1.78□□□□□ -2.12
TRAV39-201ENST00000390466 HERC2O95714 4834 aa1.77□□□□□ -2.13
TRAV39-201ENST00000390466 DMBT1Q9UGM3 2413 aaPredicted RBP1.76□□□□□ -2.13
TRAV39-201ENST00000390466 A0A1B0GVY2 172 aa1.76□□□□□ -2.13
TRAV39-201ENST00000390466 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
TRAV39-201ENST00000390466 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
TRAV39-201ENST00000390466 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
TRAV39-201ENST00000390466 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
TRAV39-201ENST00000390466 MYCBP2O75592 4640 aa1.74□□□□□ -2.13
TRAV39-201ENST00000390466 C9orf92A6NGG3 77 aa1.73□□□□□ -2.13
TRAV39-201ENST00000390466 KRTAP12-2P59991 146 aa1.73□□□□□ -2.13
TRAV39-201ENST00000390466 KRTAP10-8P60410 259 aa1.73□□□□□ -2.13
TRAV39-201ENST00000390466 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
TRAV39-201ENST00000390466 S4R3F8 94 aa1.73□□□□□ -2.13
TRAV39-201ENST00000390466 NDUFAF8A1L188 74 aa1.72□□□□□ -2.13
TRAV39-201ENST00000390466 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
TRAV39-201ENST00000390466 K7ERS5 55 aa1.71□□□□□ -2.14
TRAV39-201ENST00000390466 A0A0D9SG42 100 aa1.69□□□□□ -2.14
TRAV39-201ENST00000390466 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
TRAV39-201ENST00000390466 SPINT4Q6UDR6 99 aa1.69□□□□□ -2.14
TRAV39-201ENST00000390466 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
TRAV39-201ENST00000390466 HERC1Q15751 4861 aa1.65□□□□□ -2.14
TRAV39-201ENST00000390466 SMR3BP02814 79 aaPredicted RBP1.65□□□□□ -2.15
TRAV39-201ENST00000390466 M0QZ58 72 aa1.64□□□□□ -2.15
TRAV39-201ENST00000390466 Q5VSD8 79 aa1.64□□□□□ -2.15
TRAV39-201ENST00000390466 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
TRAV39-201ENST00000390466 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
TRAV39-201ENST00000390466 LPAP08519 4548 aa1.61□□□□□ -2.15
TRAV39-201ENST00000390466 A0A0A0MQY5 61 aa1.61□□□□□ -2.15
TRAV39-201ENST00000390466 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
TRAV39-201ENST00000390466 KRTAP10-7P60409 375 aaPredicted RBP1.61□□□□□ -2.15
TRAV39-201ENST00000390466 LRP2P98164 4655 aa1.61□□□□□ -2.15
TRAV39-201ENST00000390466 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
TRAV39-201ENST00000390466 MT1HL1P0DM35 61 aa1.6□□□□□ -2.15
TRAV39-201ENST00000390466 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
TRAV39-201ENST00000390466 PLAC4Q8WY50 150 aa1.59□□□□□ -2.15
TRAV39-201ENST00000390466 LUZP6Q538Z0 58 aa1.57□□□□□ -2.16
TRAV39-201ENST00000390466 MUC2Q02817 5179 aa1.57□□□□□ -2.16
TRAV39-201ENST00000390466 PP632Q6XCG6 107 aa1.54□□□□□ -2.16
TRAV39-201ENST00000390466 KRTAP4-1Q9BYQ7 146 aa1.53□□□□□ -2.16
TRAV39-201ENST00000390466 KRTAP23-1A1A580 65 aa1.52□□□□□ -2.17
TRAV39-201ENST00000390466 HMCN2Q8NDA2 5059 aa1.51□□□□□ -2.17
TRAV39-201ENST00000390466 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
TRAV39-201ENST00000390466 R4GN34 69 aa1.5□□□□□ -2.17
TRAV39-201ENST00000390466 RNF213Q63HN8 5207 aa1.5□□□□□ -2.17
TRAV39-201ENST00000390466 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
TRAV39-201ENST00000390466 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
TRAV39-201ENST00000390466 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
TRAV39-201ENST00000390466 PRO2289Q9P1D8 64 aa1.44□□□□□ -2.18
TRAV39-201ENST00000390466 FAT4Q6V0I7 4981 aa1.43□□□□□ -2.18
TRAV39-201ENST00000390466 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
TRAV39-201ENST00000390466 TNP1P09430 55 aa1.43□□□□□ -2.18
TRAV39-201ENST00000390466 SEC61BP60468 96 aaKnown RBP1.42□□□□□ -2.18
TRAV39-201ENST00000390466 CAMK2N1Q7Z7J9 78 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms