RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
VLDLR-203ENST00000382100 DNAH3Q8TD57 4116 aa3.79□□□□□ -1.8
VLDLR-203ENST00000382100 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
VLDLR-203ENST00000382100 CSMD1Q96PZ7 3565 aa3.72□□□□□ -1.81
VLDLR-203ENST00000382100 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
VLDLR-203ENST00000382100 CSMD2Q7Z408 3487 aa3.71□□□□□ -1.81
VLDLR-203ENST00000382100 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
VLDLR-203ENST00000382100 ANK2Q01484 3957 aa3.69□□□□□ -1.82
VLDLR-203ENST00000382100 LYSTQ99698 3801 aa3.67□□□□□ -1.82
VLDLR-203ENST00000382100 CMYA5Q8N3K9 4069 aa3.66□□□□□ -1.82
VLDLR-203ENST00000382100 HECTD4Q9Y4D8 3996 aa3.66□□□□□ -1.82
VLDLR-203ENST00000382100 KRTAP12-4P60329 112 aa3.65□□□□□ -1.82
VLDLR-203ENST00000382100 ANK3Q12955 4377 aaKnown RBP3.64□□□□□ -1.83
VLDLR-203ENST00000382100 VPS13CQ709C8 3753 aa3.63□□□□□ -1.83
VLDLR-203ENST00000382100 SVEP1Q4LDE5 3571 aa3.61□□□□□ -1.83
VLDLR-203ENST00000382100 CUBNO60494 3623 aa3.58□□□□□ -1.84
VLDLR-203ENST00000382100 DNAH7Q8WXX0 4024 aa3.58□□□□□ -1.84
VLDLR-203ENST00000382100 KMT2AQ03164 3969 aa3.58□□□□□ -1.84
VLDLR-203ENST00000382100 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
VLDLR-203ENST00000382100 VPS13BQ7Z7G8 4022 aa3.56□□□□□ -1.84
VLDLR-203ENST00000382100 SPRR2EP22531 72 aa3.54□□□□□ -1.84
VLDLR-203ENST00000382100 SPRR2BP35325 72 aa3.54□□□□□ -1.84
VLDLR-203ENST00000382100 SPRR2AP35326 72 aa3.54□□□□□ -1.84
VLDLR-203ENST00000382100 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
VLDLR-203ENST00000382100 CSMD3Q7Z407 3707 aa3.52□□□□□ -1.85
VLDLR-203ENST00000382100 HUWE1Q7Z6Z7 4374 aaKnown RBP3.52□□□□□ -1.85
VLDLR-203ENST00000382100 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
VLDLR-203ENST00000382100 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
VLDLR-203ENST00000382100 MT1GP13640 62 aa3.52□□□□□ -1.85
VLDLR-203ENST00000382100 DNAH1Q9P2D7 4330 aa3.51□□□□□ -1.85
VLDLR-203ENST00000382100 KRTAP4-5Q9BYR2 181 aa3.49□□□□□ -1.85
VLDLR-203ENST00000382100 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
VLDLR-203ENST00000382100 MT2AP02795 61 aa3.49□□□□□ -1.85
VLDLR-203ENST00000382100 SPRR2DP22532 72 aa3.46□□□□□ -1.86
VLDLR-203ENST00000382100 LRP1Q07954 4544 aaKnown RBP3.45□□□□□ -1.86
VLDLR-203ENST00000382100 MT1FP04733 61 aa3.44□□□□□ -1.86
VLDLR-203ENST00000382100 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
VLDLR-203ENST00000382100 MT1HP80294 61 aa3.42□□□□□ -1.86
VLDLR-203ENST00000382100 MT1LQ93083 61 aa3.4□□□□□ -1.86
VLDLR-203ENST00000382100 FRAS1Q86XX4 4008 aa3.37□□□□□ -1.87
VLDLR-203ENST00000382100 DNAH6Q9C0G6 4158 aa3.36□□□□□ -1.87
VLDLR-203ENST00000382100 LCE2BO14633 110 aa3.35□□□□□ -1.87
VLDLR-203ENST00000382100 HSPG2P98160 4391 aa3.32□□□□□ -1.88
VLDLR-203ENST00000382100 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
VLDLR-203ENST00000382100 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
VLDLR-203ENST00000382100 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
VLDLR-203ENST00000382100 DNAH11Q96DT5 4516 aa3.24□□□□□ -1.89
VLDLR-203ENST00000382100 DNAH2Q9P225 4427 aa3.24□□□□□ -1.89
VLDLR-203ENST00000382100 DNAH9Q9NYC9 4486 aa3.24□□□□□ -1.89
VLDLR-203ENST00000382100 MT1XP80297 61 aa3.22□□□□□ -1.89
VLDLR-203ENST00000382100 LCE2DQ5TA82 110 aaPredicted RBP3.21□□□□□ -1.9
VLDLR-203ENST00000382100 MT1EP04732 61 aa3.2□□□□□ -1.9
VLDLR-203ENST00000382100 RYR1P21817 5038 aa3.2□□□□□ -1.9
VLDLR-203ENST00000382100 KRTAP19-3Q7Z4W3 81 aa3.19□□□□□ -1.9
VLDLR-203ENST00000382100 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
VLDLR-203ENST00000382100 MT1AP04731 61 aa3.08□□□□□ -1.92
VLDLR-203ENST00000382100 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
VLDLR-203ENST00000382100 MT1MQ8N339 61 aa3.07□□□□□ -1.92
VLDLR-203ENST00000382100 MT1BP07438 61 aa3.06□□□□□ -1.92
VLDLR-203ENST00000382100 MT4P47944 62 aa3.06□□□□□ -1.92
VLDLR-203ENST00000382100 FAT3Q8TDW7 4589 aa3.05□□□□□ -1.92
VLDLR-203ENST00000382100 PKHD1P08F94 4074 aa3.04□□□□□ -1.92
VLDLR-203ENST00000382100 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
VLDLR-203ENST00000382100 DNHD1Q96M86 4753 aa3□□□□□ -1.93
VLDLR-203ENST00000382100 PLECQ15149 4684 aaKnown RBP3□□□□□ -1.93
VLDLR-203ENST00000382100 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
VLDLR-203ENST00000382100 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
VLDLR-203ENST00000382100 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
VLDLR-203ENST00000382100 STARD9Q9P2P6 4700 aa2.98□□□□□ -1.93
VLDLR-203ENST00000382100 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
VLDLR-203ENST00000382100 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
VLDLR-203ENST00000382100 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
VLDLR-203ENST00000382100 VPS13DQ5THJ4 4388 aa2.96□□□□□ -1.94
VLDLR-203ENST00000382100 PRM1P04553 51 aa2.95□□□□□ -1.94
VLDLR-203ENST00000382100 DNAH8Q96JB1 4490 aa2.95□□□□□ -1.94
VLDLR-203ENST00000382100 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
VLDLR-203ENST00000382100 DYNC2H1Q8NCM8 4307 aaKnown RBP2.93□□□□□ -1.94
VLDLR-203ENST00000382100 KRTAP9-8Q9BYQ0 159 aa2.93□□□□□ -1.94
VLDLR-203ENST00000382100 KRTAP9-3Q9BYQ3 159 aa2.92□□□□□ -1.94
VLDLR-203ENST00000382100 DNAH17Q9UFH2 4485 aa2.92□□□□□ -1.94
VLDLR-203ENST00000382100 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
VLDLR-203ENST00000382100 PCLOQ9Y6V0 5065 aa2.91□□□□□ -1.94
VLDLR-203ENST00000382100 DYNC1H1Q14204 4646 aaKnown RBP2.9□□□□□ -1.95
VLDLR-203ENST00000382100 KRTAP17-1Q9BYP8 105 aa2.88□□□□□ -1.95
VLDLR-203ENST00000382100 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
VLDLR-203ENST00000382100 SACSQ9NZJ4 4579 aa2.88□□□□□ -1.95
VLDLR-203ENST00000382100 PKD1P98161 4303 aa2.88□□□□□ -1.95
VLDLR-203ENST00000382100 LRP1BQ9NZR2 4599 aa2.87□□□□□ -1.95
VLDLR-203ENST00000382100 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
VLDLR-203ENST00000382100 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
VLDLR-203ENST00000382100 DNAH5Q8TE73 4624 aa2.85□□□□□ -1.95
VLDLR-203ENST00000382100 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
VLDLR-203ENST00000382100 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
VLDLR-203ENST00000382100 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
VLDLR-203ENST00000382100 HERC1Q15751 4861 aa2.77□□□□□ -1.97
VLDLR-203ENST00000382100 FAT1Q14517 4588 aa2.75□□□□□ -1.97
VLDLR-203ENST00000382100 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
VLDLR-203ENST00000382100 KRTAP9-6A0A140TA67 174 aa2.74□□□□□ -1.97
VLDLR-203ENST00000382100 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
VLDLR-203ENST00000382100 KRTAP4-8A0A0G2JLE6 195 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms