RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
VLDLR-203ENST00000382100 MYT1Q01538 1121 aa16.5■□□□□ 0.23
VLDLR-203ENST00000382100 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
VLDLR-203ENST00000382100 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
VLDLR-203ENST00000382100 CENPBP07199 599 aaPredicted RBP15.32■□□□□ 0.04
VLDLR-203ENST00000382100 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
VLDLR-203ENST00000382100 FAM9AQ8IZU1 332 aaPredicted RBP15.29■□□□□ 0.04
VLDLR-203ENST00000382100 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
VLDLR-203ENST00000382100 ERICH6Q7L0X2 663 aa15.16■□□□□ 0.02
VLDLR-203ENST00000382100 APLP2Q06481 763 aa15.06■□□□□ 0
VLDLR-203ENST00000382100 NEFLP07196 543 aa14.92□□□□□ -0.02
VLDLR-203ENST00000382100 DCAF8L2P0C7V8 631 aa14.73□□□□□ -0.05
VLDLR-203ENST00000382100 DAXXQ9UER7 740 aaPredicted RBP14.66□□□□□ -0.06
VLDLR-203ENST00000382100 NISCHQ9Y2I1 1504 aa14.62□□□□□ -0.07
VLDLR-203ENST00000382100 MYT1LQ9UL68 1186 aa14.5□□□□□ -0.09
VLDLR-203ENST00000382100 CLSPNQ9HAW4 1339 aa14.46□□□□□ -0.09
VLDLR-203ENST00000382100 RTL5Q5HYW3 569 aaPredicted RBP14.41□□□□□ -0.1
VLDLR-203ENST00000382100 GLIPR1L2Q4G1C9 344 aa14.35□□□□□ -0.11
VLDLR-203ENST00000382100 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
VLDLR-203ENST00000382100 ZNF316A6NFI3 1004 aaPredicted RBP14.14□□□□□ -0.15
VLDLR-203ENST00000382100 NEFMP07197 916 aa14.07□□□□□ -0.16
VLDLR-203ENST00000382100 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
VLDLR-203ENST00000382100 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.18
VLDLR-203ENST00000382100 TRIM26Q12899 539 aaPredicted RBP13.9□□□□□ -0.18
VLDLR-203ENST00000382100 ANP32EQ9BTT0 268 aa13.85□□□□□ -0.19
VLDLR-203ENST00000382100 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
VLDLR-203ENST00000382100 ACIN1Q9UKV3 1341 aaKnown RBP13.81□□□□□ -0.2
VLDLR-203ENST00000382100 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
VLDLR-203ENST00000382100 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
VLDLR-203ENST00000382100 NCLP19338 710 aaKnown RBP13.71□□□□□ -0.22
VLDLR-203ENST00000382100 ANP32AP39687 249 aaKnown RBP13.7□□□□□ -0.22
VLDLR-203ENST00000382100 TNNT2P45379 298 aaPredicted RBP13.7□□□□□ -0.22
VLDLR-203ENST00000382100 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
VLDLR-203ENST00000382100 HRCP23327 699 aa13.68□□□□□ -0.22
VLDLR-203ENST00000382100 ARID4BQ4LE39 1312 aaPredicted RBP13.66□□□□□ -0.22
VLDLR-203ENST00000382100 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
VLDLR-203ENST00000382100 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
VLDLR-203ENST00000382100 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
VLDLR-203ENST00000382100 RANGAP1P46060 587 aaPredicted RBP13.54□□□□□ -0.24
VLDLR-203ENST00000382100 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
VLDLR-203ENST00000382100 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
VLDLR-203ENST00000382100 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
VLDLR-203ENST00000382100 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
VLDLR-203ENST00000382100 ANP32CO43423 234 aa13.42□□□□□ -0.26
VLDLR-203ENST00000382100 CDK11BP21127 795 aaKnown RBP13.39□□□□□ -0.27
VLDLR-203ENST00000382100 ERICH6BQ5W0A0 696 aa13.37□□□□□ -0.27
VLDLR-203ENST00000382100 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
VLDLR-203ENST00000382100 USP35Q9P2H5 1018 aa13.33□□□□□ -0.28
VLDLR-203ENST00000382100 NRDCO43847 1150 aa13.33□□□□□ -0.28
VLDLR-203ENST00000382100 L1TD1Q5T7N2 865 aaKnown RBP13.33□□□□□ -0.28
VLDLR-203ENST00000382100 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
VLDLR-203ENST00000382100 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
VLDLR-203ENST00000382100 CANXP27824 592 aaKnown RBP13.28□□□□□ -0.28
VLDLR-203ENST00000382100 BECN1Q14457 450 aa13.27□□□□□ -0.29
VLDLR-203ENST00000382100 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
VLDLR-203ENST00000382100 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
VLDLR-203ENST00000382100 CFAP44Q96MT7 982 aa13.23□□□□□ -0.29
VLDLR-203ENST00000382100 GOLGA6L6A8MZA4 724 aa13.2□□□□□ -0.3
VLDLR-203ENST00000382100 POLR3GLQ9BT43 218 aa13.2□□□□□ -0.3
VLDLR-203ENST00000382100 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
VLDLR-203ENST00000382100 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
VLDLR-203ENST00000382100 PTMSP20962 102 aa13.16□□□□□ -0.3
VLDLR-203ENST00000382100 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
VLDLR-203ENST00000382100 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
VLDLR-203ENST00000382100 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-203ENST00000382100 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
VLDLR-203ENST00000382100 DCAF1Q9Y4B6 1507 aa13.06□□□□□ -0.32
VLDLR-203ENST00000382100 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
VLDLR-203ENST00000382100 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
VLDLR-203ENST00000382100 CASC1Q6TDU7 716 aa13□□□□□ -0.33
VLDLR-203ENST00000382100 MS4A1P11836 297 aa12.98□□□□□ -0.33
VLDLR-203ENST00000382100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
VLDLR-203ENST00000382100 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
VLDLR-203ENST00000382100 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
VLDLR-203ENST00000382100 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
VLDLR-203ENST00000382100 LAS1LQ9Y4W2 734 aaKnown RBP12.95□□□□□ -0.34
VLDLR-203ENST00000382100 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
VLDLR-203ENST00000382100 CALRP27797 417 aaKnown RBP12.95□□□□□ -0.34
VLDLR-203ENST00000382100 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
VLDLR-203ENST00000382100 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
VLDLR-203ENST00000382100 TONSLQ96HA7 1378 aa12.93□□□□□ -0.34
VLDLR-203ENST00000382100 A0A0U1RQG5 324 aaPredicted RBP12.93□□□□□ -0.34
VLDLR-203ENST00000382100 CCDC34Q96HJ3 373 aa12.92□□□□□ -0.34
VLDLR-203ENST00000382100 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
VLDLR-203ENST00000382100 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
VLDLR-203ENST00000382100 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
VLDLR-203ENST00000382100 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
VLDLR-203ENST00000382100 EEA1Q15075 1411 aa12.89□□□□□ -0.35
VLDLR-203ENST00000382100 PTMAP06454 111 aaKnown RBP12.83□□□□□ -0.36
VLDLR-203ENST00000382100 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
VLDLR-203ENST00000382100 CHMP4CQ96CF2 233 aa12.82□□□□□ -0.36
VLDLR-203ENST00000382100 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
VLDLR-203ENST00000382100 SYAP1Q96A49 352 aaPredicted RBP12.8□□□□□ -0.36
VLDLR-203ENST00000382100 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
VLDLR-203ENST00000382100 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
VLDLR-203ENST00000382100 MTERF4Q7Z6M4 381 aaKnown RBP12.76□□□□□ -0.37
VLDLR-203ENST00000382100 DNTTIP2Q5QJE6 756 aaKnown RBP12.76□□□□□ -0.37
VLDLR-203ENST00000382100 GOLGA6L3A6NEY3 463 aa12.76□□□□□ -0.37
VLDLR-203ENST00000382100 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
VLDLR-203ENST00000382100 FAM50AQ14320 339 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms