RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 KRTAP12-2P59991 146 aa1.88□□□□□ -2.11
RFX3-203ENST00000381984 COX6B2Q6YFQ2 88 aa1.88□□□□□ -2.11
RFX3-203ENST00000381984 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
RFX3-203ENST00000381984 STAB1Q9NY15 2570 aa1.88□□□□□ -2.11
RFX3-203ENST00000381984 FLG2Q5D862 2391 aaPredicted RBP1.87□□□□□ -2.11
RFX3-203ENST00000381984 SVEP1Q4LDE5 3571 aa1.87□□□□□ -2.11
RFX3-203ENST00000381984 SPINK1P00995 79 aa1.87□□□□□ -2.11
RFX3-203ENST00000381984 RPL37P61927 97 aaKnown RBP1.87□□□□□ -2.11
RFX3-203ENST00000381984 DEFB135Q30KP9 77 aa1.87□□□□□ -2.11
RFX3-203ENST00000381984 TYMSOSQ8TAI1 123 aa1.87□□□□□ -2.11
RFX3-203ENST00000381984 ZANQ9Y493 2812 aa1.87□□□□□ -2.11
RFX3-203ENST00000381984 KMT2CQ8NEZ4 4911 aaKnown RBP1.87□□□□□ -2.11
RFX3-203ENST00000381984 C10orf95Q9H7T3 257 aa1.86□□□□□ -2.11
RFX3-203ENST00000381984 ANK3Q12955 4377 aaKnown RBP1.86□□□□□ -2.11
RFX3-203ENST00000381984 NBEAL1Q6ZS30 2694 aa1.86□□□□□ -2.11
RFX3-203ENST00000381984 MEGF8Q7Z7M0 2845 aa1.85□□□□□ -2.11
RFX3-203ENST00000381984 ANK2Q01484 3957 aa1.85□□□□□ -2.11
RFX3-203ENST00000381984 BIRC6Q9NR09 4857 aa1.85□□□□□ -2.11
RFX3-203ENST00000381984 SPINK6Q6UWN8 80 aa1.84□□□□□ -2.11
RFX3-203ENST00000381984 EPPK1P58107 5090 aaKnown RBP1.83□□□□□ -2.12
RFX3-203ENST00000381984 PLAC4Q8WY50 150 aa1.81□□□□□ -2.12
RFX3-203ENST00000381984 TRRAPQ9Y4A5 3859 aa1.8□□□□□ -2.12
RFX3-203ENST00000381984 MGAM2Q2M2H8 2515 aa1.8□□□□□ -2.12
RFX3-203ENST00000381984 HYDINQ4G0P3 5121 aa1.79□□□□□ -2.12
RFX3-203ENST00000381984 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
RFX3-203ENST00000381984 S4R3F8 94 aa1.79□□□□□ -2.12
RFX3-203ENST00000381984 TENM1Q9UKZ4 2725 aa1.79□□□□□ -2.12
RFX3-203ENST00000381984 PKD1L1Q8TDX9 2849 aa1.78□□□□□ -2.12
RFX3-203ENST00000381984 TGP01266 2768 aa1.78□□□□□ -2.12
RFX3-203ENST00000381984 KRTAP1-4P0C5Y4 121 aa1.77□□□□□ -2.13
RFX3-203ENST00000381984 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
RFX3-203ENST00000381984 HERC2O95714 4834 aa1.76□□□□□ -2.13
RFX3-203ENST00000381984 PRKDCP78527 4128 aaKnown RBP1.76□□□□□ -2.13
RFX3-203ENST00000381984 Q6ZRN7 208 aaPredicted RBP1.76□□□□□ -2.13
RFX3-203ENST00000381984 APLNQ9ULZ1 77 aa1.76□□□□□ -2.13
RFX3-203ENST00000381984 NBEAL2Q6ZNJ1 2754 aa1.76□□□□□ -2.13
RFX3-203ENST00000381984 VWFP04275 2813 aa1.76□□□□□ -2.13
RFX3-203ENST00000381984 NOTCH1P46531 2555 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 PCLOQ9Y6V0 5065 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 A0A0D9SG42 100 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 CMYA5Q8N3K9 4069 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 DNAH1Q9P2D7 4330 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 RYR2Q92736 4967 aa1.75□□□□□ -2.13
RFX3-203ENST00000381984 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
RFX3-203ENST00000381984 UBR4Q5T4S7 5183 aa1.73□□□□□ -2.13
RFX3-203ENST00000381984 SACSQ9NZJ4 4579 aa1.73□□□□□ -2.13
RFX3-203ENST00000381984 VPS13DQ5THJ4 4388 aa1.72□□□□□ -2.13
RFX3-203ENST00000381984 INE1O15225 51 aa1.71□□□□□ -2.14
RFX3-203ENST00000381984 UBE2DNLQ8IWF7 75 aa1.7□□□□□ -2.14
RFX3-203ENST00000381984 DYNC2H1Q8NCM8 4307 aaKnown RBP1.7□□□□□ -2.14
RFX3-203ENST00000381984 RYR1P21817 5038 aa1.69□□□□□ -2.14
RFX3-203ENST00000381984 KRTAP13-2Q52LG2 175 aa1.69□□□□□ -2.14
RFX3-203ENST00000381984 R4GN34 69 aa1.69□□□□□ -2.14
RFX3-203ENST00000381984 COL7A1Q02388 2944 aa1.69□□□□□ -2.14
RFX3-203ENST00000381984 SRRM2Q9UQ35 2752 aaKnown RBP1.69□□□□□ -2.14
RFX3-203ENST00000381984 DNAH3Q8TD57 4116 aa1.68□□□□□ -2.14
RFX3-203ENST00000381984 TENM3Q9P273 2699 aa1.68□□□□□ -2.14
RFX3-203ENST00000381984 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
RFX3-203ENST00000381984 PP632Q6XCG6 107 aa1.67□□□□□ -2.14
RFX3-203ENST00000381984 CSMD3Q7Z407 3707 aa1.67□□□□□ -2.14
RFX3-203ENST00000381984 DNAH9Q9NYC9 4486 aa1.67□□□□□ -2.14
RFX3-203ENST00000381984 LYSTQ99698 3801 aa1.66□□□□□ -2.14
RFX3-203ENST00000381984 M0QZ58 72 aa1.66□□□□□ -2.14
RFX3-203ENST00000381984 FRAS1Q86XX4 4008 aa1.66□□□□□ -2.14
RFX3-203ENST00000381984 KIAA1109Q2LD37 5005 aa1.65□□□□□ -2.15
RFX3-203ENST00000381984 DNAH8Q96JB1 4490 aa1.65□□□□□ -2.15
RFX3-203ENST00000381984 STARD9Q9P2P6 4700 aa1.64□□□□□ -2.15
RFX3-203ENST00000381984 DNAH7Q8WXX0 4024 aa1.64□□□□□ -2.15
RFX3-203ENST00000381984 RPS29P62273 56 aaKnown RBP1.64□□□□□ -2.15
RFX3-203ENST00000381984 ABCA13Q86UQ4 5058 aa1.63□□□□□ -2.15
RFX3-203ENST00000381984 STAB2Q8WWQ8 2551 aa1.63□□□□□ -2.15
RFX3-203ENST00000381984 HUWE1Q7Z6Z7 4374 aaKnown RBP1.62□□□□□ -2.15
RFX3-203ENST00000381984 DNAH11Q96DT5 4516 aa1.62□□□□□ -2.15
RFX3-203ENST00000381984 DMBT1Q9UGM3 2413 aaPredicted RBP1.62□□□□□ -2.15
RFX3-203ENST00000381984 DNAH17Q9UFH2 4485 aa1.6□□□□□ -2.15
RFX3-203ENST00000381984 HERC1Q15751 4861 aa1.6□□□□□ -2.15
RFX3-203ENST00000381984 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
RFX3-203ENST00000381984 PLECQ15149 4684 aaKnown RBP1.6□□□□□ -2.15
RFX3-203ENST00000381984 KMT2AQ03164 3969 aa1.59□□□□□ -2.15
RFX3-203ENST00000381984 C9orf92A6NGG3 77 aa1.58□□□□□ -2.16
RFX3-203ENST00000381984 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
RFX3-203ENST00000381984 DNAH6Q9C0G6 4158 aa1.58□□□□□ -2.16
RFX3-203ENST00000381984 HECTD4Q9Y4D8 3996 aa1.57□□□□□ -2.16
RFX3-203ENST00000381984 DNAH2Q9P225 4427 aa1.57□□□□□ -2.16
RFX3-203ENST00000381984 MYCBP2O75592 4640 aa1.56□□□□□ -2.16
RFX3-203ENST00000381984 DYNC1H1Q14204 4646 aaKnown RBP1.56□□□□□ -2.16
RFX3-203ENST00000381984 LCE3DQ9BYE3 92 aa1.56□□□□□ -2.16
RFX3-203ENST00000381984 Q5VSD8 79 aa1.55□□□□□ -2.16
RFX3-203ENST00000381984 HSPG2P98160 4391 aa1.52□□□□□ -2.17
RFX3-203ENST00000381984 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
RFX3-203ENST00000381984 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
RFX3-203ENST00000381984 HMCN2Q8NDA2 5059 aa1.5□□□□□ -2.17
RFX3-203ENST00000381984 PKD1P98161 4303 aa1.5□□□□□ -2.17
RFX3-203ENST00000381984 MUC2Q02817 5179 aa1.5□□□□□ -2.17
RFX3-203ENST00000381984 DNAH5Q8TE73 4624 aa1.48□□□□□ -2.17
RFX3-203ENST00000381984 APOBP04114 4563 aaKnown RBP1.48□□□□□ -2.17
RFX3-203ENST00000381984 LRP1BQ9NZR2 4599 aa1.47□□□□□ -2.17
RFX3-203ENST00000381984 TNP1P09430 55 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms