RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 KRTAP10-2P60368 255 aa3.02□□□□□ -1.93
RFC1-202ENST00000381897 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
RFC1-202ENST00000381897 LCE2BO14633 110 aa2.99□□□□□ -1.93
RFC1-202ENST00000381897 DNAH6Q9C0G6 4158 aa2.99□□□□□ -1.93
RFC1-202ENST00000381897 M0QZ58 72 aa2.99□□□□□ -1.93
RFC1-202ENST00000381897 DNAH2Q9P225 4427 aa2.98□□□□□ -1.93
RFC1-202ENST00000381897 VPS13DQ5THJ4 4388 aa2.98□□□□□ -1.93
RFC1-202ENST00000381897 KRTAP1-4P0C5Y4 121 aa2.97□□□□□ -1.93
RFC1-202ENST00000381897 DNAH11Q96DT5 4516 aa2.97□□□□□ -1.93
RFC1-202ENST00000381897 ALMS1Q8TCU4 4167 aa2.97□□□□□ -1.93
RFC1-202ENST00000381897 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.93
RFC1-202ENST00000381897 DNAH17Q9UFH2 4485 aa2.96□□□□□ -1.94
RFC1-202ENST00000381897 DNAH8Q96JB1 4490 aa2.96□□□□□ -1.94
RFC1-202ENST00000381897 HYDINQ4G0P3 5121 aa2.94□□□□□ -1.94
RFC1-202ENST00000381897 LRP1BQ9NZR2 4599 aa2.89□□□□□ -1.95
RFC1-202ENST00000381897 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
RFC1-202ENST00000381897 DNAH5Q8TE73 4624 aa2.88□□□□□ -1.95
RFC1-202ENST00000381897 XP32Q5T750 250 aa2.87□□□□□ -1.95
RFC1-202ENST00000381897 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
RFC1-202ENST00000381897 PKHD1P08F94 4074 aa2.87□□□□□ -1.95
RFC1-202ENST00000381897 VPS13BQ7Z7G8 4022 aa2.87□□□□□ -1.95
RFC1-202ENST00000381897 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
RFC1-202ENST00000381897 KRTAP10-6P60371 365 aaPredicted RBP2.85□□□□□ -1.95
RFC1-202ENST00000381897 FAT1Q14517 4588 aa2.85□□□□□ -1.95
RFC1-202ENST00000381897 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.95
RFC1-202ENST00000381897 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
RFC1-202ENST00000381897 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
RFC1-202ENST00000381897 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
RFC1-202ENST00000381897 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
RFC1-202ENST00000381897 PKD1P98161 4303 aa2.78□□□□□ -1.96
RFC1-202ENST00000381897 LCE2AQ5TA79 106 aaPredicted RBP2.77□□□□□ -1.97
RFC1-202ENST00000381897 MYCBP2O75592 4640 aa2.76□□□□□ -1.97
RFC1-202ENST00000381897 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
RFC1-202ENST00000381897 SACSQ9NZJ4 4579 aa2.75□□□□□ -1.97
RFC1-202ENST00000381897 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
RFC1-202ENST00000381897 LRP1Q07954 4544 aaKnown RBP2.74□□□□□ -1.97
RFC1-202ENST00000381897 KMT2CQ8NEZ4 4911 aaKnown RBP2.74□□□□□ -1.97
RFC1-202ENST00000381897 TNP1P09430 55 aa2.74□□□□□ -1.97
RFC1-202ENST00000381897 APOBP04114 4563 aaKnown RBP2.7□□□□□ -1.98
RFC1-202ENST00000381897 FAT3Q8TDW7 4589 aa2.7□□□□□ -1.98
RFC1-202ENST00000381897 RYR2Q92736 4967 aa2.65□□□□□ -1.99
RFC1-202ENST00000381897 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
RFC1-202ENST00000381897 HSPG2P98160 4391 aa2.63□□□□□ -1.99
RFC1-202ENST00000381897 RYR3Q15413 4870 aa2.63□□□□□ -1.99
RFC1-202ENST00000381897 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
RFC1-202ENST00000381897 LPAP08519 4548 aa2.62□□□□□ -1.99
RFC1-202ENST00000381897 RYR1P21817 5038 aa2.62□□□□□ -1.99
RFC1-202ENST00000381897 KRTAP10-4P60372 401 aaPredicted RBP2.6□□□□□ -1.99
RFC1-202ENST00000381897 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -1.99
RFC1-202ENST00000381897 KRTAP17-1Q9BYP8 105 aa2.59□□□□□ -1.99
RFC1-202ENST00000381897 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
RFC1-202ENST00000381897 LRP2P98164 4655 aa2.57□□□□□ -2
RFC1-202ENST00000381897 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
RFC1-202ENST00000381897 ABCA13Q86UQ4 5058 aa2.55□□□□□ -2
RFC1-202ENST00000381897 TNXBP22105 4242 aa2.55□□□□□ -2
RFC1-202ENST00000381897 MUC2Q02817 5179 aa2.52□□□□□ -2.01
RFC1-202ENST00000381897 MT1HL1P0DM35 61 aa2.5□□□□□ -2.01
RFC1-202ENST00000381897 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
RFC1-202ENST00000381897 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
RFC1-202ENST00000381897 HERC2O95714 4834 aa2.42□□□□□ -2.02
RFC1-202ENST00000381897 HERC1Q15751 4861 aa2.39□□□□□ -2.03
RFC1-202ENST00000381897 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
RFC1-202ENST00000381897 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
RFC1-202ENST00000381897 FAT4Q6V0I7 4981 aa2.37□□□□□ -2.03
RFC1-202ENST00000381897 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
RFC1-202ENST00000381897 LCE3BQ5TA77 95 aa2.33□□□□□ -2.04
RFC1-202ENST00000381897 LCE3CQ5T5A8 94 aa2.33□□□□□ -2.04
RFC1-202ENST00000381897 PCLOQ9Y6V0 5065 aa2.32□□□□□ -2.04
RFC1-202ENST00000381897 UBR4Q5T4S7 5183 aa2.31□□□□□ -2.04
RFC1-202ENST00000381897 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
RFC1-202ENST00000381897 KRTAP9-6A0A140TA67 174 aa2.3□□□□□ -2.04
RFC1-202ENST00000381897 KRTAP10-12P60413 245 aa2.28□□□□□ -2.04
RFC1-202ENST00000381897 CRCT1Q9UGL9 99 aa2.28□□□□□ -2.04
RFC1-202ENST00000381897 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
RFC1-202ENST00000381897 HMCN2Q8NDA2 5059 aa2.25□□□□□ -2.05
RFC1-202ENST00000381897 SPRR2GQ9BYE4 73 aa2.24□□□□□ -2.05
RFC1-202ENST00000381897 BIRC6Q9NR09 4857 aa2.24□□□□□ -2.05
RFC1-202ENST00000381897 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
RFC1-202ENST00000381897 KRTAP9-2Q9BYQ4 174 aa2.22□□□□□ -2.05
RFC1-202ENST00000381897 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
RFC1-202ENST00000381897 MT1HP80294 61 aa2.19□□□□□ -2.06
RFC1-202ENST00000381897 LCE4AQ5TA78 99 aa2.19□□□□□ -2.06
RFC1-202ENST00000381897 LOC100996750A0A140TA64 210 aa2.16□□□□□ -2.06
RFC1-202ENST00000381897 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
RFC1-202ENST00000381897 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.06
RFC1-202ENST00000381897 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
RFC1-202ENST00000381897 KRTAP9-7A8MTY7 169 aa2.15□□□□□ -2.07
RFC1-202ENST00000381897 KRTAP10-5P60370 271 aa2.15□□□□□ -2.07
RFC1-202ENST00000381897 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
RFC1-202ENST00000381897 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
RFC1-202ENST00000381897 USH2AO75445 5202 aa2.14□□□□□ -2.07
RFC1-202ENST00000381897 SPRR2EP22531 72 aa2.13□□□□□ -2.07
RFC1-202ENST00000381897 SPRR2BP35325 72 aa2.13□□□□□ -2.07
RFC1-202ENST00000381897 SPRR2AP35326 72 aa2.13□□□□□ -2.07
RFC1-202ENST00000381897 MT1FP04733 61 aa2.11□□□□□ -2.07
RFC1-202ENST00000381897 LCE5AQ5TCM9 118 aa2.11□□□□□ -2.07
RFC1-202ENST00000381897 KRTAP19-1Q8IUB9 90 aa2.11□□□□□ -2.07
RFC1-202ENST00000381897 KMT2DO14686 5537 aa2.11□□□□□ -2.07
RFC1-202ENST00000381897 MT2AP02795 61 aa2.1□□□□□ -2.07
RFC1-202ENST00000381897 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms