RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
SHROOM2-201ENST00000380913 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
SHROOM2-201ENST00000380913 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
SHROOM2-201ENST00000380913 ZNF469Q96JG9 3925 aaPredicted RBP6.03□□□□□ -1.44
SHROOM2-201ENST00000380913 HUWE1Q7Z6Z7 4374 aaKnown RBP5.99□□□□□ -1.45
SHROOM2-201ENST00000380913 KRTAP10-4P60372 401 aaPredicted RBP5.9□□□□□ -1.46
SHROOM2-201ENST00000380913 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.47
SHROOM2-201ENST00000380913 AKAP9Q99996 3911 aa5.9□□□□□ -1.47
SHROOM2-201ENST00000380913 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
SHROOM2-201ENST00000380913 MT1HP80294 61 aa5.79□□□□□ -1.48
SHROOM2-201ENST00000380913 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
SHROOM2-201ENST00000380913 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
SHROOM2-201ENST00000380913 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
SHROOM2-201ENST00000380913 SPRR2EP22531 72 aa5.69□□□□□ -1.5
SHROOM2-201ENST00000380913 SPRR2BP35325 72 aa5.69□□□□□ -1.5
SHROOM2-201ENST00000380913 SPRR2AP35326 72 aa5.69□□□□□ -1.5
SHROOM2-201ENST00000380913 MT2AP02795 61 aa5.68□□□□□ -1.5
SHROOM2-201ENST00000380913 DNAH2Q9P225 4427 aa5.61□□□□□ -1.51
SHROOM2-201ENST00000380913 DNAH10Q8IVF4 4471 aa5.6□□□□□ -1.51
SHROOM2-201ENST00000380913 MT1FP04733 61 aa5.59□□□□□ -1.51
SHROOM2-201ENST00000380913 DNAH9Q9NYC9 4486 aa5.57□□□□□ -1.52
SHROOM2-201ENST00000380913 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
SHROOM2-201ENST00000380913 SPRR2GQ9BYE4 73 aa5.54□□□□□ -1.52
SHROOM2-201ENST00000380913 MT1GP13640 62 aa5.53□□□□□ -1.52
SHROOM2-201ENST00000380913 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
SHROOM2-201ENST00000380913 SPRR2DP22532 72 aa5.47□□□□□ -1.53
SHROOM2-201ENST00000380913 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
SHROOM2-201ENST00000380913 PLECQ15149 4684 aaKnown RBP5.44□□□□□ -1.54
SHROOM2-201ENST00000380913 DNAH5Q8TE73 4624 aa5.43□□□□□ -1.54
SHROOM2-201ENST00000380913 DNAH8Q96JB1 4490 aa5.43□□□□□ -1.54
SHROOM2-201ENST00000380913 ANK2Q01484 3957 aa5.39□□□□□ -1.55
SHROOM2-201ENST00000380913 FRAS1Q86XX4 4008 aa5.39□□□□□ -1.55
SHROOM2-201ENST00000380913 KMT2AQ03164 3969 aa5.38□□□□□ -1.55
SHROOM2-201ENST00000380913 LCE2BO14633 110 aa5.38□□□□□ -1.55
SHROOM2-201ENST00000380913 FAT1Q14517 4588 aa5.36□□□□□ -1.55
SHROOM2-201ENST00000380913 LYSTQ99698 3801 aa5.36□□□□□ -1.55
SHROOM2-201ENST00000380913 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
SHROOM2-201ENST00000380913 DNAH17Q9UFH2 4485 aa5.3□□□□□ -1.56
SHROOM2-201ENST00000380913 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
SHROOM2-201ENST00000380913 STARD9Q9P2P6 4700 aa5.24□□□□□ -1.57
SHROOM2-201ENST00000380913 DNAH3Q8TD57 4116 aa5.23□□□□□ -1.57
SHROOM2-201ENST00000380913 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
SHROOM2-201ENST00000380913 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
SHROOM2-201ENST00000380913 LRP1BQ9NZR2 4599 aa5.2□□□□□ -1.58
SHROOM2-201ENST00000380913 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
SHROOM2-201ENST00000380913 PRKDCP78527 4128 aaKnown RBP5.19□□□□□ -1.58
SHROOM2-201ENST00000380913 FAT2Q9NYQ8 4349 aa5.17□□□□□ -1.58
SHROOM2-201ENST00000380913 CMYA5Q8N3K9 4069 aa5.16□□□□□ -1.58
SHROOM2-201ENST00000380913 DNHD1Q96M86 4753 aa5.14□□□□□ -1.59
SHROOM2-201ENST00000380913 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
SHROOM2-201ENST00000380913 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
SHROOM2-201ENST00000380913 MT1XP80297 61 aa5.08□□□□□ -1.6
SHROOM2-201ENST00000380913 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
SHROOM2-201ENST00000380913 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
SHROOM2-201ENST00000380913 MT4P47944 62 aa5.06□□□□□ -1.6
SHROOM2-201ENST00000380913 DNAH6Q9C0G6 4158 aa5.05□□□□□ -1.6
SHROOM2-201ENST00000380913 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
SHROOM2-201ENST00000380913 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
SHROOM2-201ENST00000380913 SACSQ9NZJ4 4579 aa5.05□□□□□ -1.6
SHROOM2-201ENST00000380913 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
SHROOM2-201ENST00000380913 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
SHROOM2-201ENST00000380913 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
SHROOM2-201ENST00000380913 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
SHROOM2-201ENST00000380913 DNAH7Q8WXX0 4024 aa5□□□□□ -1.61
SHROOM2-201ENST00000380913 FAT3Q8TDW7 4589 aa5□□□□□ -1.61
SHROOM2-201ENST00000380913 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
SHROOM2-201ENST00000380913 RYR1P21817 5038 aa4.99□□□□□ -1.61
SHROOM2-201ENST00000380913 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
SHROOM2-201ENST00000380913 PRM1P04553 51 aa4.97□□□□□ -1.61
SHROOM2-201ENST00000380913 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
SHROOM2-201ENST00000380913 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
SHROOM2-201ENST00000380913 LCE1DQ5T752 114 aa4.9□□□□□ -1.62
SHROOM2-201ENST00000380913 MT1BP07438 61 aa4.89□□□□□ -1.63
SHROOM2-201ENST00000380913 LRP1Q07954 4544 aaKnown RBP4.87□□□□□ -1.63
SHROOM2-201ENST00000380913 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
SHROOM2-201ENST00000380913 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
SHROOM2-201ENST00000380913 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
SHROOM2-201ENST00000380913 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
SHROOM2-201ENST00000380913 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
SHROOM2-201ENST00000380913 LPAP08519 4548 aa4.71□□□□□ -1.66
SHROOM2-201ENST00000380913 MT3P25713 68 aa4.69□□□□□ -1.66
SHROOM2-201ENST00000380913 MT1LQ93083 61 aa4.68□□□□□ -1.66
SHROOM2-201ENST00000380913 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
SHROOM2-201ENST00000380913 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
SHROOM2-201ENST00000380913 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
SHROOM2-201ENST00000380913 RYR3Q15413 4870 aa4.62□□□□□ -1.67
SHROOM2-201ENST00000380913 LRP2P98164 4655 aa4.62□□□□□ -1.67
SHROOM2-201ENST00000380913 MT1EP04732 61 aa4.6□□□□□ -1.67
SHROOM2-201ENST00000380913 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
SHROOM2-201ENST00000380913 PKD1P98161 4303 aa4.59□□□□□ -1.67
SHROOM2-201ENST00000380913 HSPG2P98160 4391 aa4.56□□□□□ -1.68
SHROOM2-201ENST00000380913 MT1MQ8N339 61 aa4.53□□□□□ -1.68
SHROOM2-201ENST00000380913 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
SHROOM2-201ENST00000380913 HYDINQ4G0P3 5121 aa4.49□□□□□ -1.69
SHROOM2-201ENST00000380913 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
SHROOM2-201ENST00000380913 LCE1CQ5T751 118 aa4.44□□□□□ -1.7
SHROOM2-201ENST00000380913 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
SHROOM2-201ENST00000380913 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
SHROOM2-201ENST00000380913 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
SHROOM2-201ENST00000380913 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms