RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
SHROOM2-201ENST00000380913 EHMT2Q96KQ7 1210 aa24.87■■□□□ 1.57
SHROOM2-201ENST00000380913 PELP1Q8IZL8 1130 aaKnown RBP24.66■■□□□ 1.54
SHROOM2-201ENST00000380913 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
SHROOM2-201ENST00000380913 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
SHROOM2-201ENST00000380913 TTBK1Q5TCY1 1321 aaPredicted RBP24.01■■□□□ 1.43
SHROOM2-201ENST00000380913 MYT1Q01538 1121 aa23.76■■□□□ 1.39
SHROOM2-201ENST00000380913 APLP2Q06481 763 aa23.75■■□□□ 1.39
SHROOM2-201ENST00000380913 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
SHROOM2-201ENST00000380913 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
SHROOM2-201ENST00000380913 RANGAP1P46060 587 aaPredicted RBP23.5■■□□□ 1.35
SHROOM2-201ENST00000380913 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
SHROOM2-201ENST00000380913 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
SHROOM2-201ENST00000380913 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
SHROOM2-201ENST00000380913 ATP1B4Q9UN42 357 aaPredicted RBP23.28■■□□□ 1.32
SHROOM2-201ENST00000380913 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
SHROOM2-201ENST00000380913 NEFLP07196 543 aa23.09■■□□□ 1.29
SHROOM2-201ENST00000380913 DAXXQ9UER7 740 aaPredicted RBP22.88■■□□□ 1.25
SHROOM2-201ENST00000380913 CNGB1Q14028 1251 aaPredicted RBP22.79■■□□□ 1.24
SHROOM2-201ENST00000380913 POLR3GLQ9BT43 218 aa22.76■■□□□ 1.23
SHROOM2-201ENST00000380913 PPARGC1BQ86YN6 1023 aaKnown RBP22.61■■□□□ 1.21
SHROOM2-201ENST00000380913 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
SHROOM2-201ENST00000380913 MYT1LQ9UL68 1186 aa22.55■■□□□ 1.2
SHROOM2-201ENST00000380913 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
SHROOM2-201ENST00000380913 UBTFP17480 764 aaKnown RBP22.46■■□□□ 1.19
SHROOM2-201ENST00000380913 SLC4A1APQ9BWU0 796 aaKnown RBP22.41■■□□□ 1.18
SHROOM2-201ENST00000380913 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
SHROOM2-201ENST00000380913 ITGAEP38570 1179 aa22.31■■□□□ 1.16
SHROOM2-201ENST00000380913 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
SHROOM2-201ENST00000380913 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
SHROOM2-201ENST00000380913 RTL5Q5HYW3 569 aaPredicted RBP22.19■■□□□ 1.14
SHROOM2-201ENST00000380913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
SHROOM2-201ENST00000380913 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
SHROOM2-201ENST00000380913 BCL11AQ9H165 835 aa22.14■■□□□ 1.13
SHROOM2-201ENST00000380913 SLC24A1O60721 1099 aa21.88■■□□□ 1.09
SHROOM2-201ENST00000380913 BCANQ96GW7 911 aa21.85■■□□□ 1.09
SHROOM2-201ENST00000380913 HRCP23327 699 aa21.73■■□□□ 1.07
SHROOM2-201ENST00000380913 ZBTB47Q9UFB7 747 aaPredicted RBP21.64■■□□□ 1.05
SHROOM2-201ENST00000380913 TRIM26Q12899 539 aaPredicted RBP21.56■■□□□ 1.04
SHROOM2-201ENST00000380913 EIF5BO60841 1220 aaKnown RBP21.56■■□□□ 1.04
SHROOM2-201ENST00000380913 ZNF326Q5BKZ1 582 aaKnown RBP21.44■■□□□ 1.02
SHROOM2-201ENST00000380913 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
SHROOM2-201ENST00000380913 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
SHROOM2-201ENST00000380913 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
SHROOM2-201ENST00000380913 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
SHROOM2-201ENST00000380913 TRIM52Q96A61 297 aa21.38■■□□□ 1.01
SHROOM2-201ENST00000380913 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
SHROOM2-201ENST00000380913 FAM50AQ14320 339 aaKnown RBP21.35■■□□□ 1.01
SHROOM2-201ENST00000380913 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
SHROOM2-201ENST00000380913 LOC105371045A0A1W2PR82 267 aa21.33■■□□□ 1.01
SHROOM2-201ENST00000380913 GTF3C3Q9Y5Q9 886 aa21.26■□□□□ 0.99
SHROOM2-201ENST00000380913 ARXQ96QS3 562 aa21.24■□□□□ 0.99
SHROOM2-201ENST00000380913 HSP90AA1P07900 732 aaKnown RBP21.12■□□□□ 0.97
SHROOM2-201ENST00000380913 ANP32BQ92688 251 aaKnown RBP21.11■□□□□ 0.97
SHROOM2-201ENST00000380913 ANP32CO43423 234 aa21.1■□□□□ 0.97
SHROOM2-201ENST00000380913 ANP32AP39687 249 aaKnown RBP21.09■□□□□ 0.97
SHROOM2-201ENST00000380913 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
SHROOM2-201ENST00000380913 NEFMP07197 916 aa21.07■□□□□ 0.96
SHROOM2-201ENST00000380913 NBR1Q14596 966 aa20.94■□□□□ 0.94
SHROOM2-201ENST00000380913 GLIPR1L2Q4G1C9 344 aa20.88■□□□□ 0.93
SHROOM2-201ENST00000380913 SALL2Q9Y467 1007 aaPredicted RBP20.87■□□□□ 0.93
SHROOM2-201ENST00000380913 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
SHROOM2-201ENST00000380913 TULP1O00294 542 aaPredicted RBP20.84■□□□□ 0.93
SHROOM2-201ENST00000380913 A0A0G2JS52 829 aa20.83■□□□□ 0.93
SHROOM2-201ENST00000380913 CDK11BP21127 795 aaKnown RBP20.82■□□□□ 0.92
SHROOM2-201ENST00000380913 FBLN2P98095 1184 aa20.81■□□□□ 0.92
SHROOM2-201ENST00000380913 PLEKHG5O94827 1062 aa20.75■□□□□ 0.91
SHROOM2-201ENST00000380913 UPF2Q9HAU5 1272 aaKnown RBP20.72■□□□□ 0.91
SHROOM2-201ENST00000380913 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
SHROOM2-201ENST00000380913 FKBP8Q14318 412 aa20.71■□□□□ 0.91
SHROOM2-201ENST00000380913 TPRNQ4KMQ1 711 aa20.69■□□□□ 0.9
SHROOM2-201ENST00000380913 CHGAP10645 457 aaKnown RBP20.67■□□□□ 0.9
SHROOM2-201ENST00000380913 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
SHROOM2-201ENST00000380913 ZNF777Q9ULD5 760 aaPredicted RBP20.61■□□□□ 0.89
SHROOM2-201ENST00000380913 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
SHROOM2-201ENST00000380913 FAM9BQ8IZU0 186 aa20.59■□□□□ 0.89
SHROOM2-201ENST00000380913 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.88
SHROOM2-201ENST00000380913 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
SHROOM2-201ENST00000380913 ZBTB7CA1YPR0 619 aa20.54■□□□□ 0.88
SHROOM2-201ENST00000380913 TAOK2Q9UL54 1235 aa20.53■□□□□ 0.88
SHROOM2-201ENST00000380913 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
SHROOM2-201ENST00000380913 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
SHROOM2-201ENST00000380913 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
SHROOM2-201ENST00000380913 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
SHROOM2-201ENST00000380913 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
SHROOM2-201ENST00000380913 CCDC136Q96JN2 1154 aa20.42■□□□□ 0.86
SHROOM2-201ENST00000380913 NCLP19338 710 aaKnown RBP20.41■□□□□ 0.86
SHROOM2-201ENST00000380913 TRIM44Q96DX7 344 aaPredicted RBP20.38■□□□□ 0.85
SHROOM2-201ENST00000380913 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.35■□□□□ 0.85
SHROOM2-201ENST00000380913 DNTTIP2Q5QJE6 756 aaKnown RBP20.35■□□□□ 0.85
SHROOM2-201ENST00000380913 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
SHROOM2-201ENST00000380913 RTN4Q9NQC3 1192 aaKnown RBP20.32■□□□□ 0.84
SHROOM2-201ENST00000380913 PTMAP06454 111 aaKnown RBP20.31■□□□□ 0.84
SHROOM2-201ENST00000380913 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
SHROOM2-201ENST00000380913 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
SHROOM2-201ENST00000380913 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
SHROOM2-201ENST00000380913 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
SHROOM2-201ENST00000380913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.26■□□□□ 0.83
SHROOM2-201ENST00000380913 TMC1Q8TDI8 760 aa20.25■□□□□ 0.83
SHROOM2-201ENST00000380913 WDR43Q15061 677 aaKnown RBP eCLIP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms