RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 KRTAP10-8P60410 259 aa10.17□□□□□ -0.78
FOXC1-201ENST00000380874 XP32Q5T750 250 aa10.17□□□□□ -0.78
FOXC1-201ENST00000380874 APOBP04114 4563 aaKnown RBP10.06□□□□□ -0.8
FOXC1-201ENST00000380874 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
FOXC1-201ENST00000380874 MYCBP2O75592 4640 aa10.03□□□□□ -0.8
FOXC1-201ENST00000380874 KRTAP25-1Q3LHN0 102 aa10.01□□□□□ -0.81
FOXC1-201ENST00000380874 KMT2CQ8NEZ4 4911 aaKnown RBP9.96□□□□□ -0.81
FOXC1-201ENST00000380874 RYR2Q92736 4967 aa9.93□□□□□ -0.82
FOXC1-201ENST00000380874 ROMO1P60602 79 aa9.9□□□□□ -0.82
FOXC1-201ENST00000380874 P0C880 135 aa9.89□□□□□ -0.83
FOXC1-201ENST00000380874 KIAA1109Q2LD37 5005 aa9.84□□□□□ -0.83
FOXC1-201ENST00000380874 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
FOXC1-201ENST00000380874 KRTAP3-3Q9BYR6 98 aa9.81□□□□□ -0.84
FOXC1-201ENST00000380874 KRTAP10-6P60371 365 aaPredicted RBP9.79□□□□□ -0.84
FOXC1-201ENST00000380874 KRTAP13-4Q3LI77 160 aa9.78□□□□□ -0.84
FOXC1-201ENST00000380874 KRTAP4-5Q9BYR2 181 aa9.78□□□□□ -0.84
FOXC1-201ENST00000380874 KRTAP17-1Q9BYP8 105 aa9.76□□□□□ -0.85
FOXC1-201ENST00000380874 M0R2T5 61 aa9.75□□□□□ -0.85
FOXC1-201ENST00000380874 RYR3Q15413 4870 aa9.74□□□□□ -0.85
FOXC1-201ENST00000380874 FAT3Q8TDW7 4589 aa9.73□□□□□ -0.85
FOXC1-201ENST00000380874 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
FOXC1-201ENST00000380874 RYR1P21817 5038 aa9.7□□□□□ -0.86
FOXC1-201ENST00000380874 SEC61BP60468 96 aaKnown RBP9.69□□□□□ -0.86
FOXC1-201ENST00000380874 M0QZ58 72 aa9.68□□□□□ -0.86
FOXC1-201ENST00000380874 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
FOXC1-201ENST00000380874 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
FOXC1-201ENST00000380874 R4GN34 69 aa9.67□□□□□ -0.86
FOXC1-201ENST00000380874 HSPG2P98160 4391 aa9.65□□□□□ -0.86
FOXC1-201ENST00000380874 C10orf95Q9H7T3 257 aa9.63□□□□□ -0.87
FOXC1-201ENST00000380874 KRTAP12-2P59991 146 aa9.56□□□□□ -0.88
FOXC1-201ENST00000380874 NDUFAF8A1L188 74 aa9.53□□□□□ -0.88
FOXC1-201ENST00000380874 TNXBP22105 4242 aa9.52□□□□□ -0.89
FOXC1-201ENST00000380874 LRP2P98164 4655 aa9.5□□□□□ -0.89
FOXC1-201ENST00000380874 KRTAP12-1P59990 96 aa9.43□□□□□ -0.9
FOXC1-201ENST00000380874 CAMK2N1Q7Z7J9 78 aa9.36□□□□□ -0.91
FOXC1-201ENST00000380874 LPAP08519 4548 aa9.32□□□□□ -0.92
FOXC1-201ENST00000380874 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
FOXC1-201ENST00000380874 LUZP6Q538Z0 58 aa9.29□□□□□ -0.92
FOXC1-201ENST00000380874 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
FOXC1-201ENST00000380874 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
FOXC1-201ENST00000380874 ABCA13Q86UQ4 5058 aa9.12□□□□□ -0.95
FOXC1-201ENST00000380874 HERC2O95714 4834 aa9.08□□□□□ -0.96
FOXC1-201ENST00000380874 A0A0A0MQY5 61 aa9.07□□□□□ -0.96
FOXC1-201ENST00000380874 PLAC4Q8WY50 150 aa8.87□□□□□ -0.99
FOXC1-201ENST00000380874 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
FOXC1-201ENST00000380874 BIRC6Q9NR09 4857 aa8.78□□□□□ -1
FOXC1-201ENST00000380874 MUC2Q02817 5179 aa8.76□□□□□ -1.01
FOXC1-201ENST00000380874 TNP1P09430 55 aa8.73□□□□□ -1.01
FOXC1-201ENST00000380874 KRTAP10-10P60014 251 aa8.7□□□□□ -1.02
FOXC1-201ENST00000380874 PCLOQ9Y6V0 5065 aa8.69□□□□□ -1.02
FOXC1-201ENST00000380874 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
FOXC1-201ENST00000380874 MUC17Q685J3 4493 aa8.62□□□□□ -1.03
FOXC1-201ENST00000380874 KRTAP19-2Q3LHN2 52 aa8.58□□□□□ -1.04
FOXC1-201ENST00000380874 HERC1Q15751 4861 aa8.56□□□□□ -1.04
FOXC1-201ENST00000380874 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
FOXC1-201ENST00000380874 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
FOXC1-201ENST00000380874 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
FOXC1-201ENST00000380874 UBR4Q5T4S7 5183 aa8.28□□□□□ -1.08
FOXC1-201ENST00000380874 MT1HP80294 61 aa8.27□□□□□ -1.08
FOXC1-201ENST00000380874 LCE2CQ5TA81 110 aa8.27□□□□□ -1.09
FOXC1-201ENST00000380874 HMCN2Q8NDA2 5059 aa8.24□□□□□ -1.09
FOXC1-201ENST00000380874 FSIP2Q5CZC0 6907 aa8.23□□□□□ -1.09
FOXC1-201ENST00000380874 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
FOXC1-201ENST00000380874 SPRR2GQ9BYE4 73 aa8.18□□□□□ -1.1
FOXC1-201ENST00000380874 MT1FP04733 61 aa8.17□□□□□ -1.1
FOXC1-201ENST00000380874 MT2AP02795 61 aa8.16□□□□□ -1.1
FOXC1-201ENST00000380874 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
FOXC1-201ENST00000380874 KRTAP23-1A1A580 65 aa7.97□□□□□ -1.13
FOXC1-201ENST00000380874 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
FOXC1-201ENST00000380874 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
FOXC1-201ENST00000380874 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
FOXC1-201ENST00000380874 MT1BP07438 61 aa7.76□□□□□ -1.17
FOXC1-201ENST00000380874 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
FOXC1-201ENST00000380874 KRTAP12-3P60328 96 aa7.75□□□□□ -1.17
FOXC1-201ENST00000380874 MT1XP80297 61 aa7.71□□□□□ -1.17
FOXC1-201ENST00000380874 KRTAP10-5P60370 271 aa7.7□□□□□ -1.18
FOXC1-201ENST00000380874 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
FOXC1-201ENST00000380874 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
FOXC1-201ENST00000380874 KRTAP9-3Q9BYQ3 159 aa7.61□□□□□ -1.19
FOXC1-201ENST00000380874 SPRR5A0A1B0GTR4 108 aa7.55□□□□□ -1.2
FOXC1-201ENST00000380874 INE1O15225 51 aa7.53□□□□□ -1.2
FOXC1-201ENST00000380874 LCE2BO14633 110 aa7.4□□□□□ -1.23
FOXC1-201ENST00000380874 KRTAP19-5Q3LI72 72 aa7.39□□□□□ -1.23
FOXC1-201ENST00000380874 USH2AO75445 5202 aa7.39□□□□□ -1.23
FOXC1-201ENST00000380874 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
FOXC1-201ENST00000380874 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
FOXC1-201ENST00000380874 KMT2DO14686 5537 aa7.22□□□□□ -1.25
FOXC1-201ENST00000380874 LCE3CQ5T5A8 94 aa7.14□□□□□ -1.27
FOXC1-201ENST00000380874 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
FOXC1-201ENST00000380874 OBSCNQ5VST9 7968 aa7.06□□□□□ -1.28
FOXC1-201ENST00000380874 CRCT1Q9UGL9 99 aa7□□□□□ -1.29
FOXC1-201ENST00000380874 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
FOXC1-201ENST00000380874 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
FOXC1-201ENST00000380874 SPRR2FQ96RM1 72 aa6.84□□□□□ -1.31
FOXC1-201ENST00000380874 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
FOXC1-201ENST00000380874 SYNE1Q8NF91 8797 aaKnown RBP6.79□□□□□ -1.32
FOXC1-201ENST00000380874 KRTAP9-6A8MVA2 160 aa6.72□□□□□ -1.33
FOXC1-201ENST00000380874 MT1LQ93083 61 aa6.71□□□□□ -1.34
FOXC1-201ENST00000380874 MT1EP04732 61 aa6.7□□□□□ -1.34
FOXC1-201ENST00000380874 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms