RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 ABRACLQ9P1F3 81 aa-0.96□□□□□ -2.56
SNAPC3-201ENST00000380799 SPENQ96T58 3664 aaKnown RBP-0.96□□□□□ -2.56
SNAPC3-201ENST00000380799 WDR87Q6ZQQ6 2873 aa-0.96□□□□□ -2.56
SNAPC3-201ENST00000380799 MAST1Q9Y2H9 1570 aa-0.96□□□□□ -2.56
SNAPC3-201ENST00000380799 M0QY20 66 aa-0.98□□□□□ -2.57
SNAPC3-201ENST00000380799 DEFB1P60022 68 aa-0.98□□□□□ -2.57
SNAPC3-201ENST00000380799 CLPSL2Q6UWE3 100 aa-0.98□□□□□ -2.57
SNAPC3-201ENST00000380799 SMIM5Q71RC9 77 aa-0.98□□□□□ -2.57
SNAPC3-201ENST00000380799 KAAG1Q9UBP8 84 aa-0.98□□□□□ -2.57
SNAPC3-201ENST00000380799 A0A0C4DFX4 3053 aa-0.98□□□□□ -2.57
SNAPC3-201ENST00000380799 MT1HP80294 61 aa-0.99□□□□□ -2.57
SNAPC3-201ENST00000380799 PLECQ15149 4684 aaKnown RBP-0.99□□□□□ -2.57
SNAPC3-201ENST00000380799 EFCAB6Q5THR3 1501 aa-1.01□□□□□ -2.57
SNAPC3-201ENST00000380799 PRXQ9BXM0 1461 aa-1.02□□□□□ -2.57
SNAPC3-201ENST00000380799 DNAH8Q96JB1 4490 aa-1.02□□□□□ -2.57
SNAPC3-201ENST00000380799 DNHD1Q96M86 4753 aa-1.03□□□□□ -2.57
SNAPC3-201ENST00000380799 SMIM27A0A1W2PRY6 76 aa-1.03□□□□□ -2.57
SNAPC3-201ENST00000380799 KRTAP8-1Q8IUC2 63 aa-1.03□□□□□ -2.57
SNAPC3-201ENST00000380799 FAM208AQ9UK61 1670 aaKnown RBP-1.04□□□□□ -2.58
SNAPC3-201ENST00000380799 SMR3BP02814 79 aaPredicted RBP-1.04□□□□□ -2.58
SNAPC3-201ENST00000380799 RELNP78509 3460 aa-1.05□□□□□ -2.58
SNAPC3-201ENST00000380799 H0YGX0 51 aa-1.05□□□□□ -2.58
SNAPC3-201ENST00000380799 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.06□□□□□ -2.58
SNAPC3-201ENST00000380799 M0QZ58 72 aa-1.06□□□□□ -2.58
SNAPC3-201ENST00000380799 A8MTW9 85 aa-1.07□□□□□ -2.58
SNAPC3-201ENST00000380799 WFDC10BQ8IUB3 73 aa-1.07□□□□□ -2.58
SNAPC3-201ENST00000380799 LAMA3Q16787 3333 aa-1.08□□□□□ -2.58
SNAPC3-201ENST00000380799 COL12A1Q99715 3063 aa-1.08□□□□□ -2.58
SNAPC3-201ENST00000380799 TLN2Q9Y4G6 2542 aa-1.08□□□□□ -2.58
SNAPC3-201ENST00000380799 KIF21BO75037 1637 aa-1.08□□□□□ -2.58
SNAPC3-201ENST00000380799 SPTBN5Q9NRC6 3674 aaKnown RBP-1.09□□□□□ -2.58
SNAPC3-201ENST00000380799 AGLP35573 1532 aa-1.1□□□□□ -2.59
SNAPC3-201ENST00000380799 CMYA5Q8N3K9 4069 aa-1.11□□□□□ -2.59
SNAPC3-201ENST00000380799 PREX2Q70Z35 1606 aa-1.11□□□□□ -2.59
SNAPC3-201ENST00000380799 DNAH7Q8WXX0 4024 aa-1.12□□□□□ -2.59
SNAPC3-201ENST00000380799 LMO7Q8WWI1 1683 aa-1.12□□□□□ -2.59
SNAPC3-201ENST00000380799 DYNC1H1Q14204 4646 aaKnown RBP-1.12□□□□□ -2.59
SNAPC3-201ENST00000380799 ERICH3Q5RHP9 1530 aa-1.12□□□□□ -2.59
SNAPC3-201ENST00000380799 MYO9AB2RTY4 2548 aa-1.13□□□□□ -2.59
SNAPC3-201ENST00000380799 CELSR3Q9NYQ7 3312 aa-1.13□□□□□ -2.59
SNAPC3-201ENST00000380799 FRYQ5TBA9 3013 aa-1.14□□□□□ -2.59
SNAPC3-201ENST00000380799 CEP295Q9C0D2 2601 aa-1.15□□□□□ -2.59
SNAPC3-201ENST00000380799 ITPR1Q14643 2758 aa-1.17□□□□□ -2.6
SNAPC3-201ENST00000380799 SPTAN1Q13813 2472 aaKnown RBP-1.17□□□□□ -2.6
SNAPC3-201ENST00000380799 MROH2AA6NES4 1674 aa-1.17□□□□□ -2.6
SNAPC3-201ENST00000380799 ABCA13Q86UQ4 5058 aa-1.17□□□□□ -2.6
SNAPC3-201ENST00000380799 C5orf42Q9H799 3197 aa-1.18□□□□□ -2.6
SNAPC3-201ENST00000380799 SYCP2Q9BX26 1530 aa-1.19□□□□□ -2.6
SNAPC3-201ENST00000380799 PLNP26678 52 aa-1.19□□□□□ -2.6
SNAPC3-201ENST00000380799 MT1XP80297 61 aa-1.2□□□□□ -2.6
SNAPC3-201ENST00000380799 ABCA5Q8WWZ7 1642 aa-1.2□□□□□ -2.6
SNAPC3-201ENST00000380799 ADCY10Q96PN6 1610 aa-1.22□□□□□ -2.6
SNAPC3-201ENST00000380799 CFAP46Q8IYW2 2715 aa-1.22□□□□□ -2.6
SNAPC3-201ENST00000380799 MT1HL1P0DM35 61 aa-1.22□□□□□ -2.6
SNAPC3-201ENST00000380799 CHD7Q9P2D1 2997 aa-1.22□□□□□ -2.6
SNAPC3-201ENST00000380799 LRBAP50851 2863 aa-1.22□□□□□ -2.61
SNAPC3-201ENST00000380799 TFF3Q07654 80 aa-1.23□□□□□ -2.61
SNAPC3-201ENST00000380799 COL6A5A8TX70 2615 aa-1.24□□□□□ -2.61
SNAPC3-201ENST00000380799 LINC01546A6NGU7 62 aa-1.24□□□□□ -2.61
SNAPC3-201ENST00000380799 NRXN3Q9Y4C0 1643 aa-1.25□□□□□ -2.61
SNAPC3-201ENST00000380799 SPART-AS1P0CW21 52 aa-1.25□□□□□ -2.61
SNAPC3-201ENST00000380799 DEFB131AP59861 70 aa-1.27□□□□□ -2.61
SNAPC3-201ENST00000380799 ABCC8Q09428 1581 aa-1.28□□□□□ -2.61
SNAPC3-201ENST00000380799 MT1EP04732 61 aa-1.28□□□□□ -2.61
SNAPC3-201ENST00000380799 DNAH10Q8IVF4 4471 aa-1.28□□□□□ -2.61
SNAPC3-201ENST00000380799 SRCAPQ6ZRS2 3230 aa-1.29□□□□□ -2.62
SNAPC3-201ENST00000380799 TRRAPQ9Y4A5 3859 aa-1.3□□□□□ -2.62
SNAPC3-201ENST00000380799 TLN1Q9Y490 2541 aaKnown RBP-1.31□□□□□ -2.62
SNAPC3-201ENST00000380799 IQGAP1P46940 1657 aa-1.31□□□□□ -2.62
SNAPC3-201ENST00000380799 CMC2Q9NRP2 79 aa-1.31□□□□□ -2.62
SNAPC3-201ENST00000380799 DNAH17Q9UFH2 4485 aa-1.32□□□□□ -2.62
SNAPC3-201ENST00000380799 CSMD1Q96PZ7 3565 aa-1.32□□□□□ -2.62
SNAPC3-201ENST00000380799 DDX60Q8IY21 1712 aaKnown RBP-1.33□□□□□ -2.62
SNAPC3-201ENST00000380799 EYSQ5T1H1 3165 aa-1.34□□□□□ -2.62
SNAPC3-201ENST00000380799 MT1LQ93083 61 aa-1.34□□□□□ -2.62
SNAPC3-201ENST00000380799 SMIM2Q9BVW6 85 aa-1.34□□□□□ -2.62
SNAPC3-201ENST00000380799 DNAH5Q8TE73 4624 aa-1.35□□□□□ -2.62
SNAPC3-201ENST00000380799 ITPR2Q14571 2701 aa-1.35□□□□□ -2.63
SNAPC3-201ENST00000380799 FANCD2Q9BXW9 1451 aa-1.35□□□□□ -2.63
SNAPC3-201ENST00000380799 POLR2KP53803 58 aaKnown RBP-1.35□□□□□ -2.63
SNAPC3-201ENST00000380799 SMG1Q96Q15 3661 aaKnown RBP-1.35□□□□□ -2.63
SNAPC3-201ENST00000380799 MGAQ8IWI9 3026 aa-1.36□□□□□ -2.63
SNAPC3-201ENST00000380799 ADGRG4Q8IZF6 3080 aa-1.37□□□□□ -2.63
SNAPC3-201ENST00000380799 DMXL2Q8TDJ6 3036 aa-1.4□□□□□ -2.63
SNAPC3-201ENST00000380799 NFAT5O94916 1531 aa-1.4□□□□□ -2.63
SNAPC3-201ENST00000380799 KRTAP20-1Q3LI63 56 aa-1.42□□□□□ -2.64
SNAPC3-201ENST00000380799 MT1MQ8N339 61 aa-1.42□□□□□ -2.64
SNAPC3-201ENST00000380799 MT2AP02795 61 aa-1.43□□□□□ -2.64
SNAPC3-201ENST00000380799 MT1GP13640 62 aa-1.45□□□□□ -2.64
SNAPC3-201ENST00000380799 CLTCL1P53675 1640 aa-1.45□□□□□ -2.64
SNAPC3-201ENST00000380799 TRPM2O94759 1503 aa-1.45□□□□□ -2.64
SNAPC3-201ENST00000380799 MT1BP07438 61 aa-1.46□□□□□ -2.64
SNAPC3-201ENST00000380799 ATMQ13315 3056 aa-1.47□□□□□ -2.64
SNAPC3-201ENST00000380799 LEAP2Q969E1 77 aa-1.51□□□□□ -2.65
SNAPC3-201ENST00000380799 BOD1L1Q8NFC6 3051 aa-1.51□□□□□ -2.65
SNAPC3-201ENST00000380799 ZFHX4Q86UP3 3567 aa-1.52□□□□□ -2.65
SNAPC3-201ENST00000380799 CSMD2Q7Z408 3487 aa-1.52□□□□□ -2.65
SNAPC3-201ENST00000380799 NDUFA1O15239 70 aa-1.55□□□□□ -2.66
SNAPC3-201ENST00000380799 DEFB4AO15263 64 aa-1.56□□□□□ -2.66
SNAPC3-201ENST00000380799 SNRPGP15A8MWD9 76 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms