RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
SNAPC3-201ENST00000380799 CHIC1Q5VXU3 224 aa24.53■■□□□ 1.52
SNAPC3-201ENST00000380799 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
SNAPC3-201ENST00000380799 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
SNAPC3-201ENST00000380799 FOXD1Q16676 465 aa20.37■□□□□ 0.85
SNAPC3-201ENST00000380799 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
SNAPC3-201ENST00000380799 MSH5O43196 834 aa19.14■□□□□ 0.65
SNAPC3-201ENST00000380799 PIAS4Q8N2W9 510 aaPredicted RBP19.12■□□□□ 0.65
SNAPC3-201ENST00000380799 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
SNAPC3-201ENST00000380799 ADRA2BP18089 450 aa19.07■□□□□ 0.64
SNAPC3-201ENST00000380799 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
SNAPC3-201ENST00000380799 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
SNAPC3-201ENST00000380799 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
SNAPC3-201ENST00000380799 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
SNAPC3-201ENST00000380799 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
SNAPC3-201ENST00000380799 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
SNAPC3-201ENST00000380799 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-201ENST00000380799 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
SNAPC3-201ENST00000380799 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
SNAPC3-201ENST00000380799 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
SNAPC3-201ENST00000380799 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
SNAPC3-201ENST00000380799 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
SNAPC3-201ENST00000380799 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
SNAPC3-201ENST00000380799 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
SNAPC3-201ENST00000380799 KCNA4P22459 653 aa16.13■□□□□ 0.17
SNAPC3-201ENST00000380799 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
SNAPC3-201ENST00000380799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.169e-6■□□□□ 10.7
SNAPC3-201ENST00000380799 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
SNAPC3-201ENST00000380799 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
SNAPC3-201ENST00000380799 APLP2Q06481 763 aa15.43■□□□□ 0.06
SNAPC3-201ENST00000380799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
SNAPC3-201ENST00000380799 CAPN15O75808 1086 aa15.42■□□□□ 0.06
SNAPC3-201ENST00000380799 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
SNAPC3-201ENST00000380799 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
SNAPC3-201ENST00000380799 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
SNAPC3-201ENST00000380799 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
SNAPC3-201ENST00000380799 DSG3P32926 999 aa15.26■□□□□ 0.03
SNAPC3-201ENST00000380799 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
SNAPC3-201ENST00000380799 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
SNAPC3-201ENST00000380799 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
SNAPC3-201ENST00000380799 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0
SNAPC3-201ENST00000380799 ABCB7O75027 752 aa15.02■□□□□ -0
SNAPC3-201ENST00000380799 POLA2Q14181 598 aa14.81□□□□□ -0.04
SNAPC3-201ENST00000380799 ZBTB22O15209 634 aa14.78□□□□□ -0.04
SNAPC3-201ENST00000380799 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
SNAPC3-201ENST00000380799 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
SNAPC3-201ENST00000380799 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
SNAPC3-201ENST00000380799 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
SNAPC3-201ENST00000380799 POTEHQ6S545 545 aa14.45□□□□□ -0.1
SNAPC3-201ENST00000380799 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
SNAPC3-201ENST00000380799 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
SNAPC3-201ENST00000380799 FBLN2P98095 1184 aa14.3□□□□□ -0.12
SNAPC3-201ENST00000380799 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
SNAPC3-201ENST00000380799 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
SNAPC3-201ENST00000380799 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
SNAPC3-201ENST00000380799 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
SNAPC3-201ENST00000380799 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
SNAPC3-201ENST00000380799 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
SNAPC3-201ENST00000380799 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
SNAPC3-201ENST00000380799 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
SNAPC3-201ENST00000380799 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
SNAPC3-201ENST00000380799 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
SNAPC3-201ENST00000380799 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
SNAPC3-201ENST00000380799 PIP4P2Q8N4L2 257 aa13.89□□□□□ -0.19
SNAPC3-201ENST00000380799 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
SNAPC3-201ENST00000380799 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNAPC3-201ENST00000380799 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
SNAPC3-201ENST00000380799 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNAPC3-201ENST00000380799 HAX1O00165 279 aa13.64□□□□□ -0.23
SNAPC3-201ENST00000380799 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
SNAPC3-201ENST00000380799 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
SNAPC3-201ENST00000380799 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
SNAPC3-201ENST00000380799 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
SNAPC3-201ENST00000380799 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
SNAPC3-201ENST00000380799 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
SNAPC3-201ENST00000380799 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
SNAPC3-201ENST00000380799 EVX2Q03828 476 aa13.36□□□□□ -0.27
SNAPC3-201ENST00000380799 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
SNAPC3-201ENST00000380799 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
SNAPC3-201ENST00000380799 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
SNAPC3-201ENST00000380799 PROM2Q8N271 834 aa13.21□□□□□ -0.29
SNAPC3-201ENST00000380799 GABBR2O75899 941 aa13.16□□□□□ -0.3
SNAPC3-201ENST00000380799 CLCN6P51797 869 aa13.14□□□□□ -0.31
SNAPC3-201ENST00000380799 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNAPC3-201ENST00000380799 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
SNAPC3-201ENST00000380799 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
SNAPC3-201ENST00000380799 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
SNAPC3-201ENST00000380799 PLEKHG5O94827 1062 aa13□□□□□ -0.33
SNAPC3-201ENST00000380799 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
SNAPC3-201ENST00000380799 FKBP8Q14318 412 aa12.95□□□□□ -0.34
SNAPC3-201ENST00000380799 MIER1Q8N108 512 aa12.92□□□□□ -0.34
SNAPC3-201ENST00000380799 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
SNAPC3-201ENST00000380799 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
SNAPC3-201ENST00000380799 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
SNAPC3-201ENST00000380799 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
SNAPC3-201ENST00000380799 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
SNAPC3-201ENST00000380799 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
SNAPC3-201ENST00000380799 TSPYL2Q9H2G4 693 aaPredicted RBP12.78□□□□□ -0.36
SNAPC3-201ENST00000380799 LHX8Q68G74 356 aa12.77□□□□□ -0.37
SNAPC3-201ENST00000380799 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms